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ORIGINAL RESEARCH article

Front. Bioeng. Biotechnol.

Sec. Industrial Biotechnology

Volume 13 - 2025 | doi: 10.3389/fbioe.2025.1635651

Macrotranscriptomics Analysis for Decoding the Role of Klebsiella variicola H8 in Aroma Compound Biosynthesis During Fermentation of Reconstituted Tobacco Leaf Concentrate

Provisionally accepted
  • 1Technical Centre, China Tobacco Henan Industrial Limited Company, Zhengzhou, Zhengzhou, China
  • 2Zhengzhou University of Light Industry, Zhengzhou, China
  • 3University of Balochistan, Quetta, Pakistan

The final, formatted version of the article will be published soon.

Microbial fermentation shapes the reconstituted tobacco leaf concentrate's (RTLC) chemical composition and sensory quality. This study employed macrotranscriptomic analysis to investigate how the aromaenhancing bacterium Klebsiella variicola H8 modulates RTLC fermentation. High-throughput secondgeneration RNA sequencing revealed that the transcript abundance of K. variicola H8 increased from 5.92% at the start of fermentation to 14.78% at 16 hours, accompanied by the enrichment of other key genera such as Lactobacillus and Citrobacter. Differential gene expression analysis showed that K. variicola H8 transcription correlated strongly (R² = 0.85) with water-soluble sugar degradation, while nitrogen and potassium correlations were weaker (R² = 0.47 and 0.41, respectively). Notably, the upregulation of glycoside hydrolases-particularly GH78, GH13_25, GH31, and GH28-was associated with the release of key non-volatile aroma-enhancing compounds (NAECs), such as β-damascenone (13.24 µg/g), phenylethanol (7.12 µg/g), solanone (5.89 µg/g), dihydrokiwi lactone (6.03 µg/g), and benzyl alcohol (5.15 µg/g). Furthermore, expression levels of apoptosis-related genes increased at 36 hours, coinciding with a decline in sensory quality and aroma compound accumulation.These findings reveal the dynamic microbial and enzymatic processes underpinning NAEC production and provide a mechanistic basis for optimizing microbial fermentation in tobacco processing.Keyword Metatranscriptome; Klebsiella variicola H8; reconstituted tobacco leaf concentrate; glycoside hydrolases; aroma-enhancing compounds; microbial fermentation; gene expression profiling 1 Introduction Tobacco (Nicotiana tabacum) contains ~5,000 compounds, many of which have been reported to have various pharmacological activities (Banožić et al., 2020). Recently, the extraction of bioactive compounds from plants has attracted significant interest (Suleria et al., 2016;X. Zou et al., 2021).Microbial fermentation offers several advantages, such as a high conversion rate, high specificity, and the production of high-quality aroma compounds, and is therefore applied in a wide range of food industries (Hadj Saadoun et al., 2021;Ma et al., 2024;Zara & Fan, 2023). For example, the fermentation of reconstituted tobacco leaves (RTLCs) with K. variicola H8 resulted in a ~25% reduction in nicotine

Keywords: metatranscriptome, Reconstituted tobacco leaf concentrate, Glycoside Hydrolases, aroma-enhancing compounds, Microbial Fermentation

Received: 26 May 2025; Accepted: 14 Aug 2025.

Copyright: © 2025 Yingjie, Wenyuan, Rasool, Yang, Liu, Yang, Huang and Zhang. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Aamir Rasool, University of Balochistan, Quetta, Pakistan

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