ORIGINAL RESEARCH article
Front. Bioinform.
Sec. Integrative Bioinformatics
Boolean network and meshless simulations for the comparison of transport and reaction mechanisms arising in one-short tri-exponential and uniform infusion electro-chemotherapeutic treatments
Provisionally accepted- 1InstituciΓ³n Universitaria Pascual Bravo, MedellΓn, Colombia
- 2Universidad Nacional de Colombia - Sede Medellin, MedellΓn, Colombia
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Drug administration via bloodstream involves some transport and reaction mechanisms (π πππ ), such as extravasation, perfusion along blood vessels, transmembrane and interstitial transport, protein dissociation and association and lymphatic drainage. These π πππ can be influenced by the type of pharmacokinetic profile (ππΎ) used for drug delivery in the circulatory system, as well as by the bloodstream velocity (ππππ). In electroporated tissues, the electric field magnitude (πΈ) can also affect the π πππ since it brings about vessel vasoconstriction, cell membrane and vessel wall electro-permeabilization, and change in tissue porosity. In the present work, in-house computational tools are employed to examine how the combination between πΈ and ππππ influences on the π ππβ²π existence, interaction and rates arising in electrochemotherapy for two different ππΎβ²π : One-short, Tri-exponential (πππΎ) where drug concentration decreases exponentially after one-short infusion, and Uniform (πππΎ) where drug concentration is kept constant during the whole treatment. Firstly, the ratios between extracellular, free intracellular and bound intracellular concentrations are obtained from numerical simulations with a meshless code formerly developed, calibrated and validated. Subsequently, the interaction between the π πππ is investigated by means of a Boolean model presented here that is based on the comparison of the spatio-temporal evolution of the concentration ratios. Several combinations of πΈ (0 ππ/π, 46 ππ/π, 70 ππ/π), ππππ (1 Γ 10β4π/π , 1 Γ 10β3π/π , 1 Γ 10β2π/π ) and ππΎ (πππΎ and πππΎ) are tested. The in silico findings indicate that π ππβ²π existence, interaction and rates can vary between the two ππΎβ²π (πππΎ and πππΎ) for a specific permutation of πΈ and ππππ. Nevertheless, common features are identified between these pharmacokinetic profiles. In general, the lower πΈ, the more uniform the transmembrane transport in the radial and axial direction; the decrease of ππππ also improves the radial homogeneity of this transport mechanism but negatively influences the axial uniformity. The uniformity of the mechanisms of association and dissociation is only altered monotonously by πΈ [1].
Keywords: Boolean modelling, Electroporation, infusion, Meshless techniques, Tri-exponential - one-short, uniform infusion
Received: 09 Oct 2025; Accepted: 19 Jan 2026.
Copyright: Β© 2026 VΓ©lez Salazar, PatiΓ±o Arcila, Rivera Madrid and Fulla. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
* Correspondence: FabiΓ‘n Mauricio VΓ©lez Salazar
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