Frontiers in Bioinformatics

Original Research

Published on 20 Jun 2023

Structure-based neural network protein–carbohydrate interaction predictions at the residue level

in Integrative Bioinformatics

Samuel W. Canner
Sudhanshu Shanker
Jeffrey J. Gray

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1186531

6,143 views
16 citations

Original Research

Published on 19 Jun 2023

Microbiome maps: Hilbert curve visualizations of metagenomic profiles

in Data Visualization

Camilo Valdes
Vitalii Stebliankin
Daniel Ruiz-Perez
Ji In Park
Hajeong Lee
Giri Narasimhan

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1154588

2,914 views
3 citations

Editorial

Published on 09 Jun 2023

Editorial: Graph representation learning in biological network

in Network Bioinformatics

Swarup Roy
Pietro Hiram Guzzi
Jugal Kalita

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1222711

1,453 views
2 citations

Original Research

Published on 07 Jun 2023

Human adenovirus DNA polymerase is evolutionarily and functionally associated with human telomerase reverse transcriptase based on in silico molecular characterization that implicate abacavir and zidovudine

in Drug Discovery in Bioinformatics

Toluwase Hezekiah Fatoki

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1123307

2,926 views
8 citations

Original Research

Published on 01 Jun 2023

Applications of Boolean modeling to study the dynamics of a complex disease and therapeutics responses

in Network Bioinformatics

Ahmed Abdelmonem Hemedan
Reinhard Schneider
Marek Ostaszewski

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1189723

2,868 views
7 citations

Original Research

Published on 01 Jun 2023

Visualizing incompatibilities in phylogenetic trees using consensus outlines

in Data Visualization

Daniel H. Huson
Banu Cetinkaya

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1155286

3,198 views
5 citations

Original Research

Published on 26 May 2023

Helix encoder: a compound-protein interaction prediction model specifically designed for class A GPCRs

in Drug Discovery in Bioinformatics

Haruki Yamane
Takashi Ishida

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1193025

2,122 views
2 citations

Methods

Published on 25 May 2023

ModEx: a general purpose computer model exploration system

in Data Visualization

Hamid Younesy
Joseph Pober
Torsten Möller
Mohammad M. Karimi

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1153800

1,998 views

Original Research

Published on 24 May 2023

Bayesian networks and imaging-derived phenotypes highlight the role of fat deposition in COVID-19 hospitalisation risk

in Network Bioinformatics

T. Waddell
A. I. L. Namburete
P. Duckworth
N. Eichert
H. Thomaides-Brears
D. J. Cuthbertson
J. P. Despres
M. Brady

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1163430

1,735 views
1 citation

Perspective

Published on 24 May 2023

Network medicine: facilitating a new view on complex diseases

in Network Bioinformatics

Marija Cvijovic
Annikka Polster

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1163445

1,804 views
6 citations

Brief Research Report

Published on 23 May 2023

BrcaDx: precise identification of breast cancer from expression data using a minimal set of features

in Drug Discovery in Bioinformatics

Sangeetha Muthamilselvan
Ashok Palaniappan

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1103493

2,798 views
3 citations

Editorial

Published on 22 May 2023

Editorial: Protein recognition and associated diseases

in Protein Bioinformatics

M. Michael Gromiha
Petras Kundrotas
Marcelo Adrian Marti
Česlovas Venclovas
Minghui Li

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1215141

1,224 views

Editorial

Published on 19 May 2023

Editorial: Expert opinions in integrative bioinformatics: 2022

in Integrative Bioinformatics

Tao Zeng
Chuanchao Zhang

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1218466

1,345 views

Original Research

Published on 16 May 2023

Bootstrap confidence for molecular evolutionary estimates from tumor bulk sequencing data

in Genomic Analysis

Jared Huzar
Madelyn Shenoy
Maxwell D. Sanderford
Sudhir Kumar
Sayaka Miura

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1090730

1,753 views
1 citation

Original Research

Published on 15 May 2023

Gene representation in scRNA-seq is correlated with common motifs at the 3′ end of transcripts

in Single Cell Bioinformatics

Xinling Li
Greg Gibson
Peng Qiu

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1120290

3,531 views
1 citation

Original Research

Published on 10 May 2023

A graph-based machine learning framework identifies critical properties of FVIII that lead to hemophilia A

in Network Bioinformatics

Marcos V. Ferreira
Tatiane Nogueira
Ricardo A. Rios
Tiago J. S. Lopes

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1152039

2,459 views
4 citations