REVIEW article

Front. Catal., 16 February 2024

Sec. Biocatalysis

Volume 4 - 2024 | https://doi.org/10.3389/fctls.2024.1360702

Novel concepts for the biocatalytic synthesis of second-generation biodiesel

  • 1. Department of Chemistry, University of Crete, Heraklion, Greece

  • 2. Laboratory of Natural Resources and Renewable Energies, Chemical Process and Energy Resources Institute, Centre for Research and Technology—Hellas, Thessaloniki, Greece

  • 3. Institute of Applied Biosciences, Centre for Research and Technology—Hellas, Thessaloniki, Greece

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Abstract

Biodiesel is synthesized by the transesterification of triglycerides of oils with short-chain alcohols, such as methanol and ethanol. According to the Renewable Energy Directive guidelines (RED II 2018/2001/EU) the contribution of advanced biofuels, which do not include edible oils, towards the overall EU target, is at 1% in 2025 and at least 3.5% in 2030. Bioprocesses that valorize non-edible oils for the production of second-generation biodiesel could play a critical role in achieving this goal. Immobilized lipases, as well as other enzyme classes, such as cutinases and acyltransferases, are utilized as biocatalysts for this process. For the sustainability of the process, renewable materials can be used as immobilization matrices, or even enzymes anchored on the cells as whole-cell biocatalysts. Membrane reactors can also be employed to facilitate the enzymatic transesterification by conducting a continuous enzymatic reaction and simultaneously separate the products in a single operation. The advances on the aforementioned fast-pacing fields are presented in this work.

1 Introduction

1.1 Biodiesel

The obvious effects of global climate change and the ongoing petroleum depletion have intensified research efforts towards the development of new technologies for biofuel production. The 2030 objectives outlined in the Greek National Energy and Climate Plan (NECP) involve achieving a minimum 35% share of Renewable Energy Sources (RES) in overall energy consumption, attaining a RES share of 61%–64% in electricity consumption, and reaching a 19% RES share in the transport sector. Furthermore, within the total RES share in transport, there is a specific target of 8.2% for advanced biofuels (inclusive of multipliers as per RED 2018/2001) by 2030. Meeting these ambitious goals necessitates a more than threefold increase in the share of RES used in the transport sector in Greece. Notably, the majority of this increment must originate from technologies not presently deployed on a significant scale, including advanced biofuels and biogas (Paris et al., 2021). Until recently, the main contributors to fuel energy were coal, oil, and natural gas (Mandari and Devarai, 2022). However, fuels, such as bioethanol (Kim and Dale, 2004; Balat et al., 2008; Alvira et al., 2010; Sarkar et al., 2012), biogas (Holm-Nielsen et al., 2009; Weiland, 2010), biohydrogen (Levin et al., 2004; Kapdan and Kargi, 2006), and biodiesel (Ng et al., 2022), are enriching the arsenal. They are sustainable, since they are obtained from renewable resources, and their ecological footprint can be smaller.

Biodiesel is defined as a collection of fatty acid alkyl esters (FAAEs) (Teixeira et al., 2017). The fatty acids derive from the triglycerides (TAGs) of vegetable and animal fats and oils (Shahedi et al., 2019), while the alkyl group of the ester is usually a methyl or an ethyl group. Thus, biodiesel mainly consists of fatty acid methyl esters (FAMEs), fatty acid ethyl esters (FAEEs) or a mixture of them. In the selection of non-edible oils to produce second-generation biodiesel, various criteria are considered to ensure the efficiency and sustainability of the biodiesel production process. The choice of non-edible oils is driven by the need to avoid competition with food production and to utilize feedstocks that may be abundant, economically viable, and possess favorable characteristics for biodiesel synthesis (Luque and Melero, 2012). The key criteria employed in the selection process focus on feedstock availability, cultivation requirements, biodiesel yield and quality (Bart et al., 2010). Biodiesel has attracted significant attention since it can be used in combustion engines that are already in the market without significant modifications. Moreover, it possesses important advantages, such as biodegradability, low toxicity (due to low sulfur and aromatic content), and high oxygen concentration (which secures greater combustion efficiency of the engine), in comparison to petroleum-derived diesel (Parandi et al., 2022). In addition, the cetane number, i.e., another indicator of diesel quality, is larger in biodiesel (Giakoumis and Sarakatsanis, 2018). These characteristics of biodiesel leads to improvement of engine lubrication and its shelf-life. Since biodiesel has similar physicochemical properties to the petroleum-derived diesel (Harabi et al., 2019), it can be either blended with it or directly used.

Based on the feedstock used, biodiesel is categorized as first, second, third and fourth generation biodiesel (Aro, 2016), when produced from edible oils, non-edible oils (like waste cooking oils and fats), algal biomass, and bio-based oils (like engineered algal biomass), respectively (Vignesh et al., 2021). Second-generation biodiesel, which is the specific focus of this work, is produced from low quality oils, mainly industrial by-products, such as acid oils (Degfie et al., 2019) and urban waste oils, like cooking oils (Marchetti and Errazu, 2010). It should be mentioned that biodiesel should meet specific standards according to EN 14214:2003 to be marketable, such as viscosity of 3.5–5.0 mm2/s at 40°C, 96.5% wt minimum ester content, maximum acidity index 0.50 mg KOH/g, 0.8%, 0.2%, and 0.2% wt maximum monoacylglycerol, diacylglycerol, triacylglycerol contents, respectively, and 0.25% wt maximum glycerol value. The production of second-generation biodiesel from non-edible oils holds significant promise for enhancing environmental sustainability and reducing greenhouse gas emissions compared to first-generation biofuels. Non-edible oils, sourced from plants not intended for human consumption, provide a more sustainable feedstock, minimizing the potential conflict with food production. The cultivation of these crops often requires less intensive agricultural practices, leading to lower environmental impact. Additionally, second-generation biodiesel production predominantly utilizes waste materials, such as crop residues or dedicated energy crops, mitigating the competition for arable land (Alalwan et al., 2019). Furthermore, the transesterification process involved in second-generation biodiesel production, particularly with enzymes like lipases or acyltransferases, enhances efficiency and selectivity, resulting in a higher quality and more environmentally friendly fuel. Overall, the shift towards second-generation biodiesel contributes to a more ecologically sustainable and climate-friendly alternative to first-generation biofuels, aligning with the global pursuit of cleaner and more sustainable energy sources (Naik et al., 2010).

The conventional production of biodiesel employs direct use and blending, thermal cracking (pyrolysis), micro-emulsion, or transesterification of the feedstock (Esmi et al., 2021). Among these methods, transesterification is the most common, as it utilizes a wide variety of feedstocks, leads to higher conversions and improves the fuel properties (e.g., viscosity reduction); however, it is less cost-effective. In addition, transesterification is a reversible reaction, during which the alkoxy ester group is replaced by an alcohol, and vice versa (Talukder et al., 2010). The catalysts used in the transesterification reactions are either chemical (acidic or alkaline) (Thaiyasuit et al., 2012) or enzymatic (Hama and Kondo, 2013). The conventional chemical method, using alkaline homogeneous catalyst, offers high conversion rates and short reaction times. Nevertheless, it also comes with some drawbacks in the aspect of energy consumption and environmental concerns, such as difficulty in glycerol recovery, production of undesirable wastewater, and low recovery rate of the biocatalyst (Ma et al., 2018). The alcohol concentration should also be in excess to drive the transesterification reaction towards the desired products, e.g., FAME (Brahma et al., 2022). Moreover, vigorous stirring is required due the immiscibility of fats and oils with methanol, and when there is high content of free fatty acids (FFA) in the feedstock, soap is formed with the alkaline catalyst, hurdling downstream processing; thus, increasing the cost (Kumar et al., 2018). Similarly, the acidic catalysts (Vasić et al., 2020) yield low reaction conversions, the reaction time is longer, they only work under high temperatures (> 100°C), while they still require alcohol excess (Monteiro et al., 2021; Barbosa et al., 2022).

In comparison to the chemical methods, the enzymatic production of biodiesel is more environmentally friendly as the reaction takes place under mild conditions; thus, decreasing simultaneously the energy cost of the process (Cerioni Spiropulos Gonçalves et al., 2020). In addition, the ease of product recovery (Roume et al., 2016) and waste treatment (He et al., 2022) has established the biocatalytic biodiesel production a green approach in the fuel industry. Especially, when it comes to the utilization of feedstocks, such as, acid oils, enzymatic biodiesel production appears to be the most promising method, since the biocatalyst is not negatively affected by the high FFA content and the soap formation is avoided (Marchetti et al., 2011). All these points contribute to lowering the cost of enzymatic biodiesel production as it has been reported by Budžaki et al. (2018), who presented an overall cost analysis of biodiesel production by enzymatic transesterification from sunflower oil with methanol using immobilized Thermomyces lanuginosus lipase (TLL).

1.2 Enzymatic production of biodiesel using lipases

Lipases (triacyloglycerol hydrolases, EC 3.1.1.3) are the workhorse of biocatalysis for biodiesel production. Their application was reported for the first time in 1903 (Dakin, 1903), and they have gained special industrial attention since the 1980s, due to their high stability, biodegradability, efficiency and catalytic activity under a wide range of pH and temperature (Quayson et al., 2020a). They are a versatile group of enzymes that are broadly expressed in animals, plants, and microorganisms, like bacteria and fungi (Chandra et al., 2020).

Typically, they hydrolyze oils and fats, but in systems with low water availability, they can catalyze the reverse reactions, such as esterification, transesterification (alkoholysis or acidolysis) and interesterification (de Paula et al., 2021). Due to the interfacial activation mechanism (Maidana Serpa et al., 2022; Parandi et al., 2022), lipases exist in two forms, open (active) and closed (inactive). Most lipases possess an α-helixal oligopeptide structure called “lid”, which covers the active site of the lipases, consisting of a highly conserved catalytic triad (Ser, His, Asp/Glu). The lid isolates the hydrophobic active site from the solvent, attaining thus a closed form (inactive enzyme). When the enzyme is exposed to hydrophobic surfaces, such as oil droplets, hydrophobic immobilization supports, etc., attaches to them causing lid movement and active site exposure. Therefore, in contact with hydrophobic surfaces, the enzyme adopts its open form, and thus the enzyme activity increases (Maidana Serpa et al., 2022; Parandi et al., 2022).

Lipases also display high enantio- and/or regio-product selectivity and/or substrate specificity. Depending on their regioselectivity, lipases are grouped into sn-1,3 specific, sn-2 specific and non-specific lipases, as shown in Figure 1 (Abdulmalek et al., 2021). It should be mentioned that a strict sn-1,3 specific lipase cannot offer more than 66% biodiesel yield (Monteiro et al., 2021). To surpass this barrier, mixture of multiple lipases with different specificities, called combi-lipases (Rodriguez and Ayub, 2011), could be used in one-pot reaction, as acyl movement is avoided, intermediate products are eliminated, the reaction time is reduced and the biodiesel yield is enhanced (Abdulmalek et al., 2021; Monteiro et al., 2021). Combi-lipases act synergistically, targeting all TAG esters, increasing this way the biodiesel yield (Toro et al., 2019).

FIGURE 1

FIGURE 1

Transesterification reactions catalyzed by a sn-1,3 specific, a sn-2 specific and a non-specific lipase.

2 Conversion of non-edible oils to biodiesel by lipases immobilized on conventional materials

The main limitations in lipase-based biodiesel production are the high cost of the biocatalyst (Lv et al., 2021) along with the fact that native lipases are not optimized to function under harsh industrial conditions, e.g., high temperature, wide range of pH and presence of organic solvents (Ren et al., 2011; Zhong et al., 2021). To overcome these challenges, extensive studies are conducted on lipase immobilization, proving that immobilized lipases have great industrial potential as they overcome the free-lipases associated limitations and facilitate enzyme recovery (Venkatesagowda et al., 2018). Immobilization can increase the overall efficiency and selectivity of the enzymes by providing a controlled environment for the reaction. This results in improved substrate accessibility and facilitates better interaction between the enzyme and the reactants, leading to higher conversion rates. Upon interaction with interfaces of water and oil, lipases undergo interfacial activation, a phenomenon that involves the transition from their inactive (closed) form to their active (open) one, exposing thus hydrophobic areas of the protein to the surface. Thus, in the presence of hydrophobic materials like some immobilization carriers, lipases are usually hyperactivated when immobilized on hydrophobic carriers (Bastida et al., 1998). Strategies such as careful selection of immobilization methods, engineering of active sites, and the use of hybrid enzyme systems (Wang et al., 2023; Xu et al., 2020; dos Santos et al., 2014) can contribute to improved specificity and overall performance in the biodiesel synthesis process (Tan et al., 2023). Immobilized enzymes can be used for more than one reaction cycle with little loss in activity. Moreover, the immobilized catalyst can be easily separated from the reaction media (Marín-Suárez, et al., 2019). Immobilization processes are generally based on covalent bonding, physical adsorption, entrapment, and encapsulation (Filho et al., 2019), using an extended set of supports, varying from naturally occurring carriers (olive kernel, rice husk, diatomite, etc.) (Yücel, 2011; Meunier and Legge, 2012; Cespugli et al., 2018) to synthetic carriers (nanomaterials, alginate, activated carbon, etc.) (Pinto Brito et al., 2020). Herein, we review selected representative works on the utilization of immobilized lipases to produce biodiesel from low quality oils.

Wang et al. (2017) used MAS1 lipase from marine Streptomyces sp. strain W007 immobilized onto XAD1180 resin to convert waste cooking oil, achieving 95.45% yield in 24 h. The optimal reaction conditions were 30°C, methanol to oil ratio (MOR) 3:1 (with one-step addition of methanol), enzyme loading of 80 U/g substrate, and 200 rpm agitation. This biocatalyst lost 30% of its initial activity after four cycles. When compared with commercial immobilized enzymes, namely, Novozym 435, Lipozyme RM IM and Lipozyme TL IM, it performed significantly better, when all methanol was added in one step in the start of the process.

Teixeira et al. (2017) used two acidic oils of macauba (Acrocomia aculeata) as substrates to produce biodiesel with Lipozyme 435. The first acidic oil had 42.6% acidity and 5,000 ppm water content (WC), while the second oil had 36.9% acidity and 3,484 ppm WC. They reported that 5% w/w enzyme, MOR 2:1 and incubation time at 30°C lead to 91.7% yield in 4 h (Teixeira et al., 2017).

Lipase from Burkholderia cepacia immobilized onto mesoporous silica/iron oxide magnetic coreshell nanoparticles, using canola waste cooking oil, provided 85.2% yield in 25 h (Khoobbakht, et al., 2020). In this case, the optimal reaction conditions were 34°C, 36% biocatalyst, and MOR 3:1. The performance of the immobilized B. cepacia lipase was decreasing already from the third cycle, losing 11% of its initial activity. In another work, lipase from porcine pancreas immobilized on genipin cross-linked chitosan successfully converted waste cooking oil to biodiesel with 92.33% yield in 10 h, performing equally efficiently for six cycles (Khan et al., 2020). The optimal reaction conditions were, 40°C, 6% v/v WC, catalyst loading 7.5% wt immobilized enzyme, MOR 9:1, and 150 rpm agitation. Aspergillus niger lipase immobilized on mesoporous silica material SBA-15 was very recently investigated as biocatalyst for biodiesel production, using Calophyllum inophyllum oil as a non-edible renewable resource (Arumugam and Ponnusami, 2023). Its application at 30°C, MOR 6:1, 15% v/v WC (pH 7.0) and 500 rpm agitation led to 97% yield in 8 h.

In case of combi-enzymatic systems, Poppe et al. (2018a) suggested one with lipase B from Candida antarctica (CALB), lipase from Thermomyces lanuginosus (TLL), and RML. The substrates used for the transesterification reactions were waste oil and soybean oil. Using soybean oil as substrate, molar ratio of ethanol:soybean oil was 8.09:1 and combi-lipase composition of 22.5% TLL, 50% CALB, and 27.5% RML. Using waste oil as substrate, molar ratio of ethanol:waste oil was 9:1, and the combi-lipase composition was 40% TLL, 35% CALB, and 25% RML. The reactions were performed at 40°C under agitation for both substrates. Yield, was about 50%, with average productivity of 1.94 gethylesters/gsubstrate/h, for both oils (Poppe et al., 2018a). The group evaluated the same system but after ultrasound-assisting the reactions (Poppe et al., 2018b). The reactions were carried out at 40°C for 18 h, with a 6:1 ethanol:oil molar ratio and 15% biocatalyst (by oil mass). The highest yield achieved was 90%, using soybean oil, and 70% when using the waste oil. Concerning the effect of the lipases in the reactions with waste oil, the greatest yield was obtained using pure CALB as biocatalyst, whereas for soybean oil, the highest yield was obtained with a combination 50% CALB and 50% RML.

Binhayeeding et al. (2020a), produced biodiesel (96.5% yield) from waste cooking oil in 24 h, by using Candida rugosa and Rhizomucor miehei lipase (CRL and RML, respectively) immobilized on poly (3-hydroxybutyrate) beads. The optimal reaction conditions were 45°C, 5% w/w WC, 1% of combi-lipase (ratio 1:1), MOR 6:1 and 250 rpm agitation. This combi-lipase system could be reused in six reaction cycles without losing activity (Binhayeeding et al., 2020b). The same combi-lipase system was used for biodiesel synthesis from by-products of chicken industry. Fats and skin of chicken could be converted into biodiesel (97.1% yield) in 12 h, by a mixture of CRL (1.5% wt) and RML (1% wt), immobilized on polyhydroxybutyrate (PHB) beads (Binhayeeding et al., 2020a). Here, the best conversion conditions were 40°C, 2.5% wt total enzyme loading, 5% w/w WC, MOR 6:1, and agitation 200 rpm. The combi-lipases could retain 50% of its initial activity for seven reaction cycles.

3 Biodiesel production using lipases immobilized on renewable materials of biological origin

As stated above, lipases have great potential in industrial and biotechnological processes, like detergents (de Oliveira et al., 2020), flavour enchanters (Kendirci et al., 2020), oleochemicals (Abdelmoez et al., 2013), and pharmaceuticals (Contesini et al., 2020) manufacturing. However, the major drawback of the lipase-based processes is the high cost of the biocatalyst. Development of recovery and reuse technologies, mainly through their physical or chemical immobilization in suitable carriers, is mandatory to alleviate this downside. Apart from recovery and reuse, immobilization also facilitates the stabilization of enzymes under conditions that would not be tolerated by their free counterpart (Bilal et al., 2021). Innumerable materials categorized in organic, inorganic, hybrid, physical or artificial polymers and nanostructured matrices are under evaluation as potent immobilization materials (Pavlidis et al., 2014; Ismael and Baek, 2020). Various renewable materials are employed as immobilization matrices for enzymes, providing a supportive environment for their catalytic activity. Some common types include cellulose-based material, agarose (Arana-Peña et al., 2020), alginate, chitosan (de Oliveira et al., 2017), silica-based materials, polymeric materials, nanoparticles (de Oliveira et al., 2020) and magnetic nanoparticles (López et al., 2014; Gireli and Chiappini, 2023). Considerations such as biocompatibility, pore size, chemical stability, ease of preparation, mechanical strength, and recyclability (Mohidem et al., 2023), all contribute to the successful application of immobilized enzymes in various industrial processes (Mokhtar et al., 2020). This paragraph outlines indicative novel, eco-friendly, and low-cost materials as carrier matrices for lipase immobilization.

One of the major agricultural wastes is the rice husk produced during the milling of rice (Oryza sativa). According to Food and Agricultural Organization, the forecasted global production of rice in 2022/2023 would be 519.5 million metric tons, and for every 1 kg rice produced, approximately 0.28 kg rice husk is generated. Several groups have investigated its application as a matrix for enzyme immobilization. Costa-Silva et al. (2016) tested the production of biodiesel using a lipase from a fungal plant pathogen, named Cercospora kikuchii. The lipase was immobilized by covalent binding on rice husk, resulting in a loading of 5.5 mgprotein/gsupport (75%–80% immobilization efficiency). The residual lipase activity of the immobilizate was 75%, while in its free form was 12%, indicating a significant stabilization effect of the immobilization process to the enzyme. As for the reusability of the immobilized lipase, after five cycles of use the immobilizate maintained 87.5% of its initial activity. This preparation was used for the production of biodiesel from coconut oil, transesterified with anhydrous ethanol in a molar ratio of 1:12, using tert-butanol as a solvent. The reaction was performed at 50°C for 120 h under 150 rpm agitation. Results showed 97.1% FAEE yield after 72 h, meeting the requirements of ASTM D6751, and the potential to be used as alternative biofuel (Costa-Silva et al., 2016). In another work, Bonet-Ragel and coworkers (2018) investigated the application of rice husk ash in the immobilization of a recombinant Rhizopus oryzae lipase (rROL). The researchers compared the physical adsorption of the lipase on rice husk ash (a waste product of the use of rice husk for power generation via gasification) to a commercial hydrophobic support (RelOD). However, in this case, the lipolytic activity was found 50% lower in rice husk ash than in RelOD (Bonet-Ragel et al., 2018), showcasing that the effect of immobilization matrix on the enzyme should be studied case by case. Cespugli et al. (2018) also suggested high immobilization yields of lipase B from C. antarctica and two other commercial asparaginases. Rice husk was first oxidized and functionalized with di-amino spacer for covalent immobilization. After 48 h, the immobilization of CALB on the oxidized rice husk reached 72% compared to 95% immobilization on a commercial methacrylic resin after 24 h. The hydrolytic activity of CALB on the functionalized rice husk was 316 U/g. The immobilized enzyme was used in a solvent free poly-condensation reaction.

Another significant agricultural bio-waste is the olive pomace, a side-stream of the olive oil industry. The TLL was covalently immobilized onto olive pomace, leading to a maximum loading of TLL of 18.67 mgprotein/gsupport (Yücel, 2011). Using p-nitrophenyl palmitate (pNPP) as substrate, the specific hydrolytic activity of the immobilized enzyme reached 10.31 U/mgprotein and was retained for at least ten batch reactions. When olive pomace oil was used as a substrate for biodiesel production, and with a molar ratio of MOR 6:1, biodiesel yield was 93% at 25°C, 125 rpm agitation, in a 24 h reaction, almost achieving the required product purity (Yücel, 2011).

De Castro et al. (2022) suggested the immobilization through physical adsorption of the Botryosphaeria ribis EC-01 lipase on a low-cost and eco-friendly film, composed by cassava starch, polyvinyl alcohol, and sericin blend (CS–PVA–SS). Similarly, using a pNPP hydrolytic assay, they determined a 98.7% activity retention of the immobilized lipase. Their biocatalyst led to 95% esterification of oleic acid to ethyl oleate at 49°C in n-heptane, molar ratio ethanol:oleic acid of 3:1, 1.25 g lipase film after 30 h with 150 rpm agitation. However, the immobilization only slightly protected the protein, as after seven cycles of use the yield halved (de Castro et al., 2022).

Linsha et al. (2016), using pollen grains of Hibiscus rosa-sinensis to construct hierarchically porous alumino-siloxane aerogel, investigated the biocatalytic conversion of oleic acid to methyl oleate by immobilized steapsin lipase. The rare structural architecture was developed through a bio-templating method. The highest immobilization efficiency (∼95%) was obtained after the carrier was functionalized with amino propyl groups. This is the case with most biological materials, as specific functional groups are required for covalent immobilization, and their abundance is directly correlated with the maximum load. Concerning the potential application in biodiesel synthesis, methyl oleate yield reached 59% in a reaction that was held at 40°C, in n-hexane, with a molar ratio of alcohol:oleic acid was 6:1 (Linsha et al., 2016).

Tan et al. (2006) introduced the production of biodiesel using an immobilized Candida sp. lipase on a cheap cotton membrane at high WC. The biocatalyst performed at least six cycles at a WC of 15%–20%, yielding high conversion rates, up to 90%. The half-life of the immobilized lipase was more than 200 h. This immobilizate could be efficiently used for biodiesel production as after 30 h at 40°C, WC 15% (w/w), a MOR of 3:1, the conversion was up to 98% (Tan et al., 2006).

Khosla et al. (2017) suggested the immobilization of Pseudomonas sp. ISTPL3 lipase on biochar. Biochar is carbonized biomass produced from the pyrolysis of waste biomass, which due to the presence of surface functional groups, porosity, and moderate surface area, is an appealing material for enzyme immobilization (Pandey et al., 2020). The ISTPL3 lipase was immobilized through physical adsorption and covalent binding after biochar activation with phosphoric acid. Immobilization yield and efficiency were 83.04% and 62.86%, respectively, with 21.4% leaching in the first case (non-covalent binding) (Khosla et al., 2017). Reactions were performed with the lipids from Serratia ISTD04 with MOR 6:1, for 3 h at 300 rpm. The immobilized lipase gave the highest yield of FAMEs (92.23%) followed by non-immobilized lipase (87.81%), while the alkaline transesterification with NaOH yielded the lower amount of FAMEs (81.12%). The immobilized enzyme could be used for three subsequent biodiesel reaction cycles, retaining 75% of its initial activity (Khosla et al., 2017).

4 Biodiesel production using other classes of enzymes

Besides lipases, cutinases appear very promising for biodiesel production (Serralha et al., 1998). Cutinases (EC 3.1.1.74) belong to the class of serine esterases, and to the superfamily of α/β hydrolases. They catalyze the hydrolysis, esterification, and transesterification of short and long chain esters, thus being very useful in the industry of detergents and biodiesel (Castro-Ochoa et al., 2012). The substrate of cutinases is a structural polymer lipid called cutin, which covers the plant epidermis and has a protective role. Cutin has a waxy texture and is made of long-chain fatty acids like palmitic acid (16:0) and oleic acid (18:1) joined by ester bonding, forming a steady three-dimensional structure (Bermúdez-García et al., 2017). Cutinases compete with lipases also for the enantioselective synthesis of chemicals and pharmaceuticals, as stated by Su et al. (2020). Lipases have been proven efficient for this task, given the resemblance of their active sites to tunnels, facilitating distinct orientation and binding of enantiomers. Unlike most lipases, cutinases have catalytic triads exposed to solvents, providing potential benefits in reactions by improving substrate accessibility and promoting product diffusion from active site. This characteristic might also enable catalytic reactions with sterically hindered substrates that struggle to reach confined active site clefts; thus, offering great potential in biodiesel industry.

Badenes et al. (2010) worked with the cutinase from the phytopathogenic fungus Fusarium solani pisi using TAGs as substrate. They reported as optimal conditions the 30°C, 600 rpm, 24 h reaction time and MOR of 3:1. In their case, methanolysis gave 75% conversion after 24 h. They could also show that at the same condition, the conversion could be increased, achieving 90% and 80% conversion, using 1-butanol or ethanol as alkyl donor, respectively. Bermúdez-García et al. (2017) observed similar behavior of a thermo-alkaline cutinase from Aspergillus nidulans when used to synthesize FAMEs from sesame oil. After optimizing the conditions (MOR 6:1, 2% w/v of lyophilized cutinase, 7% v/v WC, incubation at 60°C for 72 h at 250 rpm), and even adding methanol stepwise (every 24 h), they could only detect 2% conversion (Bermúdez-García et al., 2017).

The research team of Badenes and coworkers performed another work with a variant of F. solani pisi cutinase (mutant T179C), using a membrane reactor to produce biodiesel in organic media (Badenes et al., 2011a). They managed to produce up to 500 gproduct/day/genzyme from TAGs. After a 24 h reaction, with a 1.6 ratio of alcohol to fatty acid chains and enzyme concentration varying from 0.5 mg/L to 1 mg/mL they determined 90% conversion of TAGs to alkyl esters, using methanol, ethanol, and butanol (Badenes et al., 2011a). The same enzyme was also used in a reversed micellar system for alkyl esters production using acid oil (Badenes et al., 2011b). The optimum reaction conditions were 30°C, 600 rpm stirring and molar ratio of alcohol to fatty acids of 1.6. After 24 h reaction time, the methyl ester conversion achieved was 64%–78%. They observed a 45% loss of cutinase activity when incubated in the micellar system for 3 h. In addition, there was a 90% activity loss in the presence of methanol within 10 min of incubation. In contrast, an improvement of cutinase performance was achieved when incubated with ethanol or butanol, indicating that these alcohols act protectively. Mutant T179C displayed high stability in the presence of methanol, with an activity loss of only 16% (Badenes et al., 2011b).

Acyltransferases also emerged as promising candidates for biodiesel production. For instance, Rodrigues et al. (2016) investigated the biocatalytic production of biodiesel using a lipase/acyltransferase from Candida parapsilosis (CpLIP2). This biocatalyst preferably catalyses alcoholysis over hydrolysis when in aqueous or in biphasic (aqueous/organic) media. In this work, CpLIP2 was immobilized with physical adsorption and subsequent cross-linked with glutaraldehyde (GA) on two synthetic resins, polypropylene (Accurel MP 1000) and divinyl-benzene crosslinked methacrylate polymer (Lewatit VP OC 1600). The immobilization yield of CpLIP2 on Lewatit VP OC 1600 and Accurel MP 1000 was 77% and 80%, respectively. The substrate used for biodiesel production was jatropha oil in a lipid/aqueous system. The oil acidity was 3.7%. Transesterification reactions were held at 30°C, under agitation, using 10% w/w of immobilized enzyme in relation to oil. The molar ratio of methanol:TAG was 6:1. After 8 h reaction time FAME yield reached 80.5%, for CpLIP2 immobilized on Accurel MP 1000% and 93.8% for the enzyme immobilized on Lewatit VP OC 1600 (Rodrigues et al., 2016).

In another work, Mandal et al. (2020) induced the expression of acyltransferases in Graesiella emersonii NC-M1 and Chlorophyta sp. NC-M5 by the addition of phytohormones under nitrogen-limited (NL) conditions. More specifically, they used indole acetic acid and kinetin to enhance biomass and lipid production; nevertheless, this had also an effect on the expression of GPAT and DGAT (glycerol-3-phosphate acyltransferase and diacylglycerol acyltransferase) under NL conditions. The whole cells were used as biocatalysts for biodiesel production. The FAMEs profile of G. emersonii NC-M1 grown under NL and in the presence of phytohormones showed a 44.8% decline in saturated fatty acid (SFAs) content, whereas 179% increase in monounsaturated fatty acid (MUFAs), in comparison to the standard conditions. The FAMEs profile of Chlorophyta sp. NC-M5 showed 96.5% polyunsaturated fatty acid (PUFAs) contents respectively, while 52.2% drop in SFAs and MUFAs under the same conditions. Mandal and co-workers suggested that these acyltransferases could be potentially used for biodiesel production; however, until now, no follow-up work has been published.

5 Whole cells as biocatalysts for biodiesel production

Immobilized lipases and whole-cell lipases are the most studied biocatalysts for biodiesel production. However, when whole cells are employed, the indirect enzyme immobilization within or on the cells, bypasses the isolation, purification, and immobilization steps; thus, simplifying the time-consuming and material-intensive upstream processing. Moreover, whole-cell biocatalysis allows significantly better product recovery rates, simplifying also downstream processing, and further decreasing environmental and economic costs (de Carvalho, 2017; Lin and Tao, 2017). Two types of whole-cell catalysts are used for biodiesel production, i.e., whole cells producing cell-bound or intracellular lipases encoded by either native or heterologous genes (Hwang et al., 2014; Borrelli and Trono, 2015; Chandra et al., 2020) and recombinant cells displaying lipases on their surface (Smith et al., 2015; Tanaka and Kondo, 2015; Han et al., 2018; Kuroda and Ueda, 2022b; Lotti et al., 2018; Ye et al., 2021; Kuroda and Ueda, 2022a; Teymennet-Ramirez et al., 2022).

The most commonly used native lipase producers belong to the fungal species Mucor, Rhizopus (e.g., R. oryzae, R. chinensis, R. miehei), Geotrichum, Rhizomucor, Aspergillus (e.g., A. oryzae), Penicillium, Thermomyces, Fusarium. However, R. oryzae lipase (ROL) is in the spotlight, due to its remarkable 1,3-regiospecificity that yields 2-monoacylglycerol instead of glycerol, a compound that lubricates and upgrades biodiesel characteristics (López-Fernández et al., 2020). Both lipase producing R. oryzae cells and purified ROL are employed for biodiesel production usually after immobilization using various materials with biomass support particles (BSPs) being the most commonly used (Table 1). Other native lipase producers belong to the bacterial Pseudomonas, Bacillus sp., and yeast Yarrowia lipolytica, Candida antarctica and Rhodotorula sp. (Table 1). Heterologous lipase encoding genes most commonly are overexpressed in hosts such as Pichia pastoris, Saccharomyces cerevisiae, Aspergillus oryzae, and Escherichia coli (Table 2). In the case of cell-bound or intracellular lipases, low mass transfer rate of high molecular weight substrates from the solvent to the biocatalyst, cellular metabolism, protein synthesis, and also the toxicity of the alcohol used, can be the rate-limiting steps for the whole-cell bioconversion of the substrate (Schrewe et al., 2013; Aarthy et al., 2014; Wachtmeister and Rother, 2016). Permeabilization of the cells using chemical (detergents and solvents) or physical (e.g., air-drying, temperature shock) means is often applied to improve limited substrate transfer across cell walls and membranes (Ni and Chen, 2004; Aguieiras et al., 2015; Lin and Tao, 2017; Sakkow et al., 2019). While permeabilization via chemical or physical treatment of cell membrane is effective in small-scale process, large-scale implementation is problematic. Molecular engineering approaches to enhance mass transfer recently emerged as a much better alternative (Chen, 2007). The co-expression of membrane transporters can be such strategy, as demonstrated for the biocatalytic conversion of C7-C16 n-alkanes by Grant et al. (2014), who improved the specific yields of bioxidation of > C12 alkanes to fatty alcohols and acids by up to 100-fold, when co-expressed in E. coli the alkL gene from Pseudomonas putida, encoding an alkane import protein. Immobilizing the lipase on the cell surface by yeast cell surface display (YCSD) is another molecular engineering strategy that can be employed to overcome mass transfer related limitations (Smith et al., 2015; Tanaka and Kondo, 2015; Han et al., 2018; Kuroda and Ueda, 2022b; Ye et al., 2021; Kuroda and Ueda, 2022a; Teymennet-Ramirez et al., 2022). CSD has been one of the most valuable tools to not only study and comprehend protein functions, but also to bestow yeast cells with novel properties, such as novel catalytic functions, affinity binding to ligands, bioremediation or bio-monitoring properties, library screening purposes, whole-proteome studies, vaccine and antibiotics development, biosensors production, etc. (Shibasaki et al., 2009). With CSD, target peptides or proteins are displayed on the cell surface after fusion with an anchoring protein system, which in yeast typically comprises a cell wall protein (CWP) linked to glycosylphosphatidylinositol (GPI) (Tanaka and Kondo, 2015; Chen, 2017). Apart from the target enzyme and the anchor protein, the linker sequence and the host microbial cell are also structural units playing crucial role in CSD. However, the interplay between these units and lipase conformation and activity are not yet fully understood.

TABLE 1

Whole-cell biocatalystImmobilization materialBiocatalytic reactionStrategyConversion yieldReferences
Rhizopus oryzae IFO4697Cuboidal reticulated polyurethane foam BSPsMethanolysis of soybean oilAddition of substrate-related compounds to the culture medium (olive oil or oleic acid); Stepwise methanol addition; 15% water90%Ban et al. (2001)
Rhizopus oryzae IFO4697Cuboidal reticulated polyurethane foam BSPsMethanolysis of soybean oilGA cross-linking treatment70–83%Ban et al. (2002)
Rhizopus oryzae IFO4698Cuboidal reticulated polyurethane foam BSPsMethanolysis of soybean oilSolvent-free system; GA cross-linking treatment; Methyl ester treatmentca. 82%Sun et al. (2011)
Rhizopus oryzae IFO4697Cuboidal reticulated polyurethane foam BSPsMethanolysis of plant oilAirlift bioreactor for immobilization; PBR for methanolysis; Emulsification of the reaction mixture; Effect of flow rate90%Hama et al. (2007)
Rhizopus oryzae (ATCC24563, CCRC31861)Matrix of Poly (ethylene terephthalate)/polyethylene (PET/PE) nonwoven fabric and stainless steel meshMethanolysis of soybean oilCirculating PBR system; Fibrous cell immobilization matrixca. 71%Chen and Lin (2010)
Rhizopus oryzae IFO 4697Cuboidal reticulated polyurethane foam BSPsMethanolysis of Jatropha oilComparison with Novozym® 435; Spontaneous immobilization during cultivation in air-lift bioreactor; GA treatment of immobilized cells80%Tamlampudi et al. (2008)
Rhizopus oryzae NBRC 4697Polyurethane foam coated with activated carbonMethanolysis of soybean oilPBR; Effect of different types of porous polyurethane foams; Effect of cell drying method (natural drying at room temperature, vacuum drying, and freeze drying); Methanol inhibition; Effect of packing volume on PBR performanceca. 80%Kyeong and Yeom (2014)
Rhizopus oryzae NBRC 4698Polyurethane foam coated with activated carbonMethanolysis of soybean oilEffect of number of polyurethane foam; Stepwise methanol addition; Co-addition of glycerol and water; Chemical treatment with 0.1% chloroform95.0%Yeom (2016)
Rhizopus oryzae IFO4697Cuboidal reticulated polyurethane foam BSPsMethanolysis of Jatropha oilTwo-step biocatalytic approaches; Hydrolysis of unrefined Jatropha oil to FFAs in the absence of methanol using CRL; FFAs to biodiesel with the addition of methanol using R. oryzae IFO469788.6%Zhou et al. (2015)
Rhizopus oryzae MTCC262Calcium alginate beadsMethanolysis of sunflower oilEffect of alcohol as acyl acceptor (methanol, ethanol, n-propanol, n-butanol, isopropanol, isobutanol, isoamyl alcohol)84%Balasubramaniam et al. (2012)
Rhizopus chinensisLoofah (Luffa cylindrica) spongesMethanolysis of soybean oilStudy of alternative immobilization material; Effect of WC; Biocatalyst loading; Reusability> 90%He et al. (2016)
Aspergillus nigerCuboidal polystyrene packaging materialMethanolysis of microalgal lipids (Scenedesmus obliquus)Effect of reaction temperature, MOR, WC (wt% with respect to oil weight), number of BSPs90.8%Guldhe et al. (2016)
Rhodotorula mucilaginosa MTCC8737Agro-waste sugarcane bagasseConversion of marine microalga Chlorella salina oil using methyl acetateNon-alcoholic route in a solvent-free system; Effect of biocatalyst loading, oil to methyl acetate molar ratio, temperature, WC, reaction time, agitation85.29%Surendhiran et al. (2014)
Pseudomonas mendocinaFe3O4-chitosan magnetic microspheresMethanolysis of soybean oilEffect of MWCBs concentration, temperature, MOR, WC; Reusability87.32%Chen et al. (2016)
Pseudomonas mendocinaOleic acid-coated Fe3O4 magnetic microspheres in sodium alginateMethanolysis of waste cooking oilMFBR; Effect of MOR, magnetic field intensity, biocatalysts loading, reactant flow rate91.8%Chen et al. (2017)
Bacillus subtilisFerroferric oxide-polyvinyl alcohol composite beadsMethanolysis of waste frying oilMFBR coupled with MWCBs; Effect of biocatalyst loading, reactant flow rate, magnetic field intensity, temperature89.0%Liu et al. (2022)
Pseudomonas aeruginosa Q8 KX12304Free cellsMethanolysis of mustard oilEffect of temperature, agitation, inoculum size, oil to methanol ratio, n-hexane concentration100%Rana et al. (2022)

Microbial strains producing native lipases used as whole-cell biocatalysts for biodiesel production.

BSPs, biomass support particles; CRL, Candida rugosa lipase; FFAs, free fatty acids; GA, glutaraldehyde; MFBR, magnetically fluidized bed reactor; MOR, methanol to oil ratio; MWCBs, magnetic whole-cell biocatalysts; PBR, packed-bed reactor; WT, water content.

TABLE 2

Whole-cell biocatalystImmobilization materialBiocatalytic reactionStrategyConversion yieldReferences
S. cerevisiae MT8-1 expressing intracellular ROLFree cells (after permeabilization)Methanolysis of plant oilAir-drying permeabilization; Solvent-free and water-containing system; Stepwise methanol addition71%Matsumoto et al. (2001)
Asp. oryzae expressing FHLCuboidal reticulated polyurethane foam BSPsMethanolysis of soybean oilEffect of WC; Repeated methanolysis batches; Comparative characterization with immobilized R. oryzae94%Hama et al. (2008)
Asp. oryzae expressing FHLCuboidal reticulated polyurethane foam BSPsMethanolysis of high phospholipid-containing soybean oilEffect of WC, phospholipids, agitation> 90%Amoah et al. (2016)
Asp. oryzae expressing FHLGranular activated carbonMethanolysis of palm oilFAMEs as green solvent; Effect of phospholine gums (crude, degummed and refined palm oil); Effect of high melting point contaminants98.8%Quayson et al. (2020b)
Asp. oryzae expressing CALB; Asp. oryzae expressing FHLCuboidal reticulated polyurethane foam BSPsMethanolysis of soybean hydrolysate containing 73.04% FFAs and 24.81% TGAsSimultaneous conversion of a mixture of FFAs and TAGs; Stepwise methanol addition75.2% FAME; >93% FAMEAmoah et al. (2017)
P. pastoris expressing intracellular TLLFree cells (after permeabilization)Methanolysis of waste cooking oilOrganic solvent tolerance (methanol, ethanol, isopropyl alcohol); Thermostability; Freeze drying permeabilization82%Yan et al. (2014)
P. pastoris X33 expressing extracellular and intracellular lipases TLLFree cellsMethanolysis of waste cooking oilIntegrated lipase production and in situ biodiesel production; Hydrolysis-esterification stepwise strategy; Effect of methanol concentration and WC87%Yan et al. (2014b)
E. coli BL21 (DE3) co-expressing intracellular CALB and TLLWet; dry cellsMethanolysis of waste grease (21.7% of FFAs)Tandem lipases for one-pot esterification of FFAs and transesterification of TAGs with methanol in a solvent-free system95%Yan et al. (2012)

Microbial strains used as whole-cell biocatalysts for biodiesel production after heterologous expression of lipase genes.

BSPs, biomass support particles; CALB, Candida antarctica lipase B (CALB) or Novozym® 435 (commercial name); FAMEs, fatty acid methyl esters; FFAs, free fatty acids; FHL, Fusarium heterosporum lipase; ROL, Rhizopus oryzae lipase; TAGs, triacylglycerols; TLL, Thermomyces lanuginosus lipase (TLL) or Lipozyme TLIM (commercial name); WT, water content.

“Arming” the yeast cell surface with enzymes, is nevertheless one of the most attractive applications of molecular display technology, given that yeast cells obtain novel potentials as whole-cell biocatalysts and innovative bioprocesses can be conceptualized (Shibasaki et al., 2009; Tabañag et al., 2018; Fan et al., 2020). The maturation of CSD technology occurred at the turn of the second (i.e., structural based biocatalyst engineering by rational design) and third (i.e., biocatalyst engineering by directed evolution) waves of biocatalysis evolution and enabled researchers to exploit its natural ability to link genotype and phenotype as powerful library screening tool for protein engineering (Bornscheuer et al., 2012; Smith et al., 2015). The construction of whole-cell biocatalysts using the YCSD technology has the benefits of combined fine-tuning of gene expression and “natural” enzyme immobilization; thus, generating renewable self-immobilized biocatalysts (Teymennet-Ramírez, 2022). Apart from mass transfer limitations, YCSD can overcome other serious drawbacks of the conventional immobilization techniques, such as structural and functional alterations, low enzyme loading, dissociation, costs of immobilization materials and process, etc. (Ueda and Tanaka, 2000). In addition, CSD enzyme allows whole cells to readily access soluble substrates while retaining the metabolic potential of their intracellular enzyme systems (e.g., extracellular degradation of cellulose and internalization of the major product, glucose, to produce ethanol) expanding the industrial applications of engineered biocatalysts in (Smith et al., 2015). CSD of Pichia pastoris, Yarrowia lipolytica, and Saccharomyces cerevisiae is widely used to construct whole-cell biocatalysts by expressing various heterologous lipase-encoding genes (Table 3). These systems display many advantages associated with safety, simplicity of genetic manipulation and rigidity of the cell-wall structure, standardized bioproduction of target proteins, use of the biocatalyst without purification and immobilization. Compared to S. cerevisiae, P. pastoris can achieve a much higher cell density in fermentation (Dong et al., 2020) and additionally, an indirect CSD method was developed that simply displays various enzymes with an average efficiency ten times higher than that of commonly used S. cerevisiae CSD methods (Li et al., 2019a). However, the exploitation of CSD lipases on yeast cells as whole-cell biocatalysts for biodiesel production is still very limited due to poor operational stability (Fu and Vasudevan, 2010; Liu et al., 2018). One of the main hurdles to increase the use of lipases in biodiesel industry is their low stability and tolerance under high methanol concentrations that are required. Since the stoichiometric ratio for the transesterification reaction requires 3 mol methanol and 1 mol TAGs to yield 3 mol FAMEs and 1 mol glycerol, the optimal methanol to oil ratios to promote the transesterification reaction should be higher than 3:1. A higher molar ratio though, can inactivate the enzyme, especially when the alcohol is insoluble in the reaction mixture (Huang et al., 2012; Lotti et al., 2018). Stepwise addition of methanol during the transesterification to keep its concentration at a relatively low level is generally applied to circumvent this limitation. Nonetheless, apart from the methanol to oil ratio, various other parameters have to be fine-tuned to make the transesterification reaction competitive. These parameters can be related to the overall process design (e.g., solvent quantity, solvent to oil ratio, temperature, biocatalyst concentration, WC to ensure active enzyme conformation), upstream strategies (e.g., type of raw materials used, pre-treatment, plant genetic engineering) and the biocatalyst performance (e.g., robustness, natural alcohol tolerance, protein engineering) (Hasheminejad et al., 2011; Lotti et al., 2018).

TABLE 3

Whole-cell biocatalystBiocatalytic reactionStrategyConversion yieldReferences
Pichia pastoris displaying engineered Penicillium cyclopium lipase I (PCLG47I)Methanolysis of soybean oilPCLG47I mutant with improved thermostability; Effect of reaction temperature, MOR, dPCLMG47I loading, WC, methanol additional strategy, reaction time60.7%Liu et al. (2018)
Pichia pastoris displaying RMLMethanolysis of soybean oilEffect of organic solvent (acetone, tert-butyl alcohol, 2-methyl-2-butanol, petroleum ether, n-hexane, n-heptane, isooctane), temperature, water activity, isooctane to oil molar ratio, biocatalyst loading; Step-wise methanol addition83.14%Huang et al. (2012)
Pichia pastoris displaying RMLMethanolysis/Ethanolysis of PFAD and SFADEffect of biocatalyst loading, reaction temperature, alcohol used (ethanol and methanol), use of hexane as solvent; Effect of stabilizing agents GA and PEG79.1%Sena et al. (2021)
Pichia pastoris displaying engineered RML4-nitrophenyl caprylate assay; Synthesis of ethyl caproate in organic solventIncreased thermostability due to a novel disulfide bond between residues 96 and 106 (double cysteine mutants); Characterization of enzymatic properties and kinetic parameters; Thermostability239.4 ± 5.0 U/mgHan et al. (2009)
Pichia pastoris separately displaying CALB or RMLMethanolysis of refined vegetable oils (soybean, corn, sunflower) and waste oils (waste frying oil and gutter oil)Co-solvent media (tert-butanol and isooctane); MOR> 90%Jin et al. (2013)
Pichiapastoris co-displaying CALB and TLLMethanolysis of soybean oilCo-displaying two synergistic lipases; Effect of MOR, tert-butanol quantity, methanol quantity, biocatalyst loading, reaction temperature, reaction time; Operational stability and reusabilityca. 95.4%Yan et al. (2012b)
Pichiapastoris displaying bound (rPp-BL) and secretory lipase (rPp-SL) originated from Candida antarctica (Cal A and Cal B genes)Methanolysis of macro algae Caulerpa racemosa oilEffect of pretreatment on defatted C. racemosa biomass; Effect of C. racemosa biomass hydrolysate and glycerol on the growth of rPp-BL and rPp-SL; Effect of surfactant on performance of rPp-BL; Effect of MOR, combined whole-cell biocatalyst concentration, WC, temperature, reaction time, agitation93.64%Iyyappan et al. (2022)
Pichiapastoris displaying Pseudomonas aeruginosa lipase AMethanolysis of microalgae oil (Spirulina platensis)Effect of pH and temperature; Usage of hydrophilic organic solvents; Effect of metal ions and detergents87.6%Raoufi and Mousavi gargari (2018)
Pichiapastoris displaying CALBMethanolysis of soybean oilStrategies to enhance the hydrophobicity of the surface (co-displaying fungal hydrophobin, coating with ionic liquids, decane addition)77.2%Zhang et al. (2017)
Saccharomyces cerevisiae displaying FSProROL or FLProROLMethanolysis of soybean oilFlocculation functional domain of a lectin-like cell-wall protein (Flo1p) as anchor protein78.6% and 73.5%, respectivelyMatsumoto et al. (2002)
Escherichia coli displaying Staphylococcus haemolyticus L62Methanolysis of olive oilAuto-transporter protein of Pseudomonas putida EstAβ8 as anchor protein; Effect of temperature and pH∼ 89.4%Kim et al. (2013)
Pichiapastoris displaying TLLp-Nitrophenyl octanoate assayGlycosylphosphatidylinositol-modified cell wall protein (GCW61) from P. pastoris as anchor protein; Effect of pH, temperature; metal ions1964.76 U/gYang et al. (2020)
Pichia pastoris co-displaying CRL1 and ROLMethanolysis of Chinese tallow tree seed oilSynergetic co-displayed enzymes30.98%Yang et al. (2021)

Microbial strains displaying lipases on their cell surface used as whole-cell biocatalysts for biodiesel production.

CALB, Candida antarctica lipase B (CALB) or Novozym® 435 (commercial name); CRL1, Candida rugosa lipase 1; GA, glutaraldehyde; MOR, methanol to oil ratio; PEG, poly(ethylene glycol); PFAD, palm fatty acid distillate; RML, Rhizomucor miehei lipase; ROL, Rhizopus oryzae lipase; SFAD, soybean fatty acid distillate; TLL, Thermomyces lanuginosus lipase (TLL) or Lipozyme TLIM (commercial name); WT, water content.

Even though many obstacles remain to overcome, the elimination of separation and purification steps that are bypassed and the utilization of cheap waste materials for cell cultivation (thus, further reducing process costs), make whole-cell lipases very attractive catalysts for biodiesel production. In addition, both protein and metabolic engineering can facilitate the creation of tailor-made biocatalysts with desirable properties. Novel engineered lipases or even combination of lipases (compi-lipases) displaying different or complementary activities and enhanced methanol tolerance can be employed to optimize production yields, decrease unwanted side-products (unconverted intermediates such as monoglycerols, diacylglycerols, free fatty acids), and also improve biodiesel quality (Ogino and Amoah, 2019). The bioprospecting of novel native lipase producing microbial strains can also contribute to expand the spectrum of potential lipolytic enzymes and inspire novel synthetic processes (Escobar-Niño et al., 2014; Sahoo et al., 2017; Hama et al., 2018; Chow et al., 2021). On the other hand, metabolic engineering tools can be employed to design and develop biodiesel-producing microbial cell factories capable, not only of in vitro biotransformation of various common oil feedstocks to biodiesel, but also of de novo biosynthesis of biodiesel from glucose, glycerol or even cellulosic biomass (Yan et al., 2017).

6 Advances in process engineering of enzymatic biodiesel production employing membrane technology

Enzymatic transesterification processes face similar challenges to conventional transesterification processes, namely, mass transfer limitation due to the biphasic reaction mixture, thermodynamic limitations due to the reaction reversibility in the absence of product removal, scale-up and mixing issues, and technical constrains when operating at continuous mode (Athar and Zaidi, 2020). Membrane technology is a process that uses semi-permeable membranes to separate different substances in a mixture. Membrane performance is usually driven by selectivity and permeability parameters, while membrane acts as a physical barrier in liquid-liquid and solid-liquid systems (Hajilary et al., 2019). Membrane integration in enzymatic transesterification (Figure 2) may be a promising alternative to conventional processes, since they may overcome the aforementioned challenges given that they offer an unconventional immobilization option; they achieve simultaneous transesterification and biodiesel separation; and they facilitate downstream processing of enzymatically produced biodiesel and biocatalyst’s reuse.

FIGURE 2

FIGURE 2

Schematic representation of a membrane bioreactor employed for biodiesel production through enzymatic transesterification.

6.1 Biodiesel production using enzymes immobilized on membranes

Immobilization of enzymes on membranes offers several advantages over other supports, such as high surface area, easy separation, low mass transfer resistance and good mechanical strength (Kujawa et al., 2021). Furthermore, the immobilization and/or encapsulation of free enzymes using novel or modified membrane modules could increase their stability and reduce down-stream separation/purification costs compared to conventional systems, making the reuse of these catalysts easier, simply by removing the enzyme-loaded membrane module from the reaction site. The enzyme retention can be achieved by physical or chemical interactions into or onto the membrane (Cen et al., 2019), including covalent bonding, encapsulation, entrapment and enzyme adsorption.

Li et al. (2019b) developed a hybrid hollow fiber membrane by modifying a polyacrilonitrile hollow fiber membrane, using the phase inversion method. Subsequently, CALB was successfully immobilized onto the modified membrane and was used for the transesterification of soybean oil. The biodiesel production yield was found to be 78.5%, which was comparable to the yield of commercial lipase Novozyme 435, under the same experimental conditions. In addition, the immobilized enzyme retained over 88% of its activity after 20 transesterification cycles, and the biodiesel yield decreased by only 11% at the 20th reaction time. Kuo et al. (2013) studied the biodiesel production from soybean oil using an immobilized lipase from C. rugosa on a pre-activated polyvinylidene fluoride (PVDF) membrane. The membrane-immobilized lipase yielded a 95.3% biodiesel production, which remained for more than five cycles. Sunflower seed oil was also successfully converted to biodiesel via Mucor miehei lipase (Handayani et al., 2016) immobilized, by physical adsorption, onto a synthesized aminated PES membrane (PES-NH2), without decrease of catalytic activity. In addition, it was found that the modified membrane attained higher enzyme loading compared to the commercial unmodified one, while the immobilized lipase showed approximately 10% higher transesterification activity than the free lipase. Machsun et al. (2010) immobilized a lipase from Pseudomonas fluorescens into an asymmetric polyethersulfone membrane of 300 kDa, reaching 80% triolein conversion after 19 min of reaction, while no enzyme activity decay was observed after 12 operational days. Notably, the enzyme activity increased after membrane-immobilization (3-fold) compared to the free lipase under the same reaction conditions.

Apart from polymeric membranes, composite, as well as ceramic membranes have been used for the immobilization of lipases. Jafarian et al. (2020) incorporated graphene oxide nanosheets (GON) into polyethersulfone (PES) membrane for the immobilization of CRL, and used enzymatic hybrid PES-GON membrane, where the flow is perpendicular to the membrane surface, for the hydrolysis of p-nitrophenyl palmitate (p-NPP) to p-nitrophenol (p-NP). Membrane catalytic activity and p-NP release were subsequently evaluated. The results indicated that the composite enzymatic membrane could be used for biodiesel production, preventing enzyme wash-out, while p-NP rejection rate was approx. 30%. A lipase from C. rugosa was immobilized on an alumina hollow fiber membrane surface by covalent binding, as described by Ranieri et al. (2016). The specific activities of both free and immobilized enzymes were evaluated during triglycerides hydrolysis in a continuous stirred tank reactor, indicating that the immobilized lipase maintains an observed specific activity of approximately 93% compared to the free enzyme. The enzymatic membrane was also tested for olive oil hydrolysis, and after six reaction cycles, no significant decrease of the immobilized enzyme specific activity was observed. Therefore, enzyme immobilization on membranes is a promising technique for biodiesel production from vegetable oils by transesterification, since it can improve the stability, reusability and activity of lipases (Zhang et al., 2012). However, current studies present results from laboratory-scale tests and challenges still remain regarding the overall cost and the robustness of the developed materials under real large-scale operating conditions.

6.2 Enzymatic membrane reactors for biodiesel production

Membrane reactors for biodiesel production combine transesterification process and product/s separation in one process step. Figure 3 illustrates the concept of membrane reactors in biodiesel production. The reaction takes place at the retentate side of membrane module. The resulting products (FAME and glycerol) and the catalyst dissolve in the methanol phase selectively permeates through the membrane into the permeate side, while unreacted oil retained due to its larger molecular size. The continuous permeation of biodiesel and glycerol, from the reactive system, promotes transesterification reaction in the direction of product formation and thus catalytic efficiency is enhanced (Ding et al., 2020). Membrane reactor technologies play a crucial role in enhancing industrial processes by selectively removing or transporting reactants and products, thereby improving reaction efficiency, selectivity, and overall performance (Basile, 2013). In the treatment of industrial wastewater, membrane reactors can be employed for processes such as the removal of specific ions or the degradation of pollutants through catalytic reactions, electrochemical applications, such as electrolysis and enhancing ammonia production by selectively removing hydrogen, demonstrating the broad impact of membrane reactors across various industrial sectors (Sirkar et al., 1999; Stephenson et al., 2000; Basile, 2013). Many studies assess different membrane reactor configurations for biodiesel production (Atadashi et al., 2011; Bhatia et al., 2021; Emmanouilidou and Kokkinos, 2022) employing chemically catalyzed transesterification; among them, few examine the integration of membrane separation with enzymatic transesterification.

FIGURE 3

FIGURE 3

Schematic representation of a single membrane module combining reaction and separation for biodiesel production through enzymatic transesterification.

Badenes et al. (2011a) studied the transesterification of triolein employing a recombinant cutinase of Fusarium solanipisi microencapsulated in reverse micelles. The enzymatic transesterification process was combined with an ultrafiltration ceramic membrane with approx. 15 kDa pore size to retain the enzyme while permitting permeation of transesterification products. The enzymatic membrane reactor operated both in batch and continuous operation mode, achieving almost complete retention of the enzyme and its partial adsorption on the membrane surface. The enzymatic membrane reactor operated continuously for more than 28 days, resulting in high productivity (>500 g/day/genzyme) and satisfactory enzyme stability. Ko et al. (2012) developed a membrane reactor system, for the transesterification of soybean oil employing CALB, with continuous removal of glycerol and methanol through a regenerated cellulose membrane module (10 kDa molecular weight cut-off, MWCO). Methanol and glycerol were withdrawn, while unreacted oil and FAME were recirculated back to the bioreactor tank. Authors assessed both batch and continuous operation and concluded that in batch experiments the conversion reached 82.4%, whereas the conversion rate slightly decreased, after each MeOH addition step. On the contrary, in continuous mode operation, the removal of glycerol from the reaction improved the conversion rate and the biodiesel conversion found to be more than 99%. To study the effect of membrane pore size on the final conversion of biodiesel, as well as on the conversion rate, they conducted additional experiments using 25 and 50 kDa MWCO membrane. By increasing the pore size they increased conversion rate, achieving approx. 75, 50% and 40% FAME conversion in 5 h reaction for 50, 25, and 10 kDa membranes, respectively; however, the final conversion of biodiesel decreased, from 99% to 78.5%. This was attributed to the faster permeation of methanol at 50 and 25 kDa MWCO membranes, respectively, resulting in enzyme deactivation. Furthermore, when using the membrane with the larger pore size (50 kDa), oil and FAME were observed in permeate, denoting that the membranes separation was insufficient. Aghababaie et al. (2019) developed a transesterification process with a two-phase enzymatic membrane reactor to produce biodiesel from raw oil of Eruca sativa. They used a hydrophilic membrane (30 and 100 kDa) made of polyacrylonitrile (PAN) to increase the biodiesel yield by separating the organic and the polar reaction phases. The enzyme (C. rugosa lipase) was added to the organic phase (oil and FAME), which was separated by the polar phase (MeOH and glycerol) through the membrane. The two phases were recirculated in counterflow mode and the reaction took place on the membrane’s surface. Therefore, the enzyme contact with methanol and glycerol was minimum and their negative effect on the enzyme activity significantly decreased. The biodiesel yield of the two-phase bioreactor system with PAN 100 membrane and a 40 mL/min flow rate of the organic phase reached almost 100%. Moreover, glycerol was successfully removed from the organic phase while the enzyme was entrapped in the organic phase.

6.3 Membrane post-treatment processes in enzymatic transesterification technology

Even though enzymatic transesterification has great potential for biodiesel production, the downstream processing has many challenges to overcome, which are similar to the conventional transesterification processes, such as: 1) the large amount of unreacted alcohol, mainly methanol, that is used to achieve high transesterification efficiency, 2) the recovery of the lipases (especially when used as free enzymes) to be re-used for further transesterification cycles, and 3) the separation of glycerol, which is the main by-product of the transesterification process. There are several separation/purification technologies that are currently used for biodiesel post-treatment, such as filtration, decantation, wet or dry washing, distillation, adsorption and others (Bhatia et al., 2021). However, there are problems associated with these conventional methods, including large amount of water, excessive heat demand and high energy consumption that have resulted in the development of competitive novel technologies, such as membrane separation. The interest on membrane separation in enzymatically produced biodiesel arises from the fact that these methods require lower energy consumption and time scales, and is also safe, easy and environmental-friendly (Ding et al., 2020).

Sokač et al. (2020) recently evaluated the purification of biodiesel produced by lipase catalyzed transesterification from edible sunflower oil carried out by decantation, followed by ultrafiltration membrane technology. Four different ultrafiltration membranes, polypropylene, polyethersulfone, polyacrylonitrile and regenerated cellulose, were tested for the elimination of the remaining glycerol, after removing the bulk of the glycerol through centrifugation. No additional water was added in the enzymatically produced biodiesel prior to ultrafiltration at 4 bar trans-membrane pressure. Their experiments were conducted at room temperature (25°C) and the authors found that polyacrylonitrile membrane was the most efficient for glycerol removal, compared to the other three membranes tested. More specifically, polyacrylonitrile membrane successfully removed approx. 91.5% of free glycerol content, while polyethersulfone, and regenerated cellulose membranes exhibited a glycerol removal efficiency of approx. 83.8% and 83.2%, respectively. In addition, the membrane fouling was investigated, using the Hermia’s model, and the results showed that in discontinuous filtration mode, intermediate blocking appeared after the first filtration cycle, while complete cake layer appeared at the following filtration cycles. Gojun et al. (2021) investigated the impact of polyethersulfone membrane at a cross-flow separation process of glycerol, which was produced as a by-product of TLL catalyzed transesterification of sunflower oil. The membrane used in their system had 10 kDa MWCO and significantly removed glycerol from biodiesel, achieving a glycerol-content below 0.02% (w/w) in the permeate stream.

Romero et al. (2022) recently evaluated the performance of different pore sizes (MWCO) flat sheet polymeric membranes (0.2 μm–90 kDa), in the purification of fatty acid methyl esters (FAME) concerning soap and moisture content, acidity and color. The authors used crude industrial FAME that exceed the maximum amount of glycerol according to EN 14214:2013 (Committee for Standardization, 2003). A cross flow system was used at a constant trans-membrane pressure of 3 bars. It was shown that both hydrophobic and hydrophilic NF membranes were unsatisfactory in terms of permeation of biodiesel, suggesting fouling to be the main cause. Unsatisfactory results were also achieved with the 0.2 μm MF membrane. However, the industrial FAME was successfully purified using a UF membrane (10 kDa); lower amount of soap content (undetected amount), 13% less moisture and phosphorous reduction of approx. 97% was achieved, while the color of the FAME was also significantly reduced (10 on the Gardner color scale) and meet the requirements established by ASTM. Kumar and Pal (2021) developed an integrated experimental process for the downstream separation and purification of biodiesel, produced by lipase catalyzed transesterification. They combined effectively two membrane-based applications: a solar-driven direct contact membrane distillation (DCMD), followed by a cross-flow membrane process. At the first step of distillation, a separation of the excess ethanol was aimed, so as to be reused at the transesterification process, while at the second step, the removal of glycerol was evaluated using a flat sheet polyethersulfone membrane employing a typical cross-flow membrane module. Regarding the novel designed DCMD module system, of the two hydrophobic membranes tested, it was shown that the PTFE/PET (polyethylene terephthalate) was more efficient compared to the PP (polypropylene). More specific, at the optimum experimental conditions, the PTFE/PET membrane resulted in a maximum flux of 41 kg EtOH/m2/24 h, at temperatures of 60°C and 20°C in the feed and distillate stream, respectively. At the same conditions, the PP membrane reached a maximum of 28 kg EtOH/m2/24 h. One remarkable result is that the membrane performance and their characteristics was not affected after the distillation experiments. In addition, concerning cross flow experiments using a PES membrane at an operating transmembrane pressure of 2.5 bars, 77% separation of glycerol (concentration of 0.02% w/w in the permeate) was accomplished after 150 min. The biodiesel at the permeate was within the limits of the ASTM and EN standards.

An alternative use of membrane separation process was investigated by Andrade et al. (2019), focusing on the recovery of liquid enzymes, specifically Eversa Transform and Resinase HT, from the reaction mixture after transesterification. The authors investigated a water diafiltration process for the removal of methanol and glycerol from the reaction mixture, using ultrafiltration membrane to avoid the deactivation of the enzyme. Next, the condensation of the remaining solution (after the diafiltration process) was attempted using tubular ceramic ultrafiltration membranes with MWCO of 15 and 25 kDa. This separation procedure resulted in the reduction of glycerol and methanol content to less than 1% w/w at the Eversa Transform and Resinase HT solution. Additionally, they concluded that both enzyme-rich solutions can be efficiently reused (achieving FAME yields of around 80%–83%), and that the ceramic membranes tested did not exhibit any deterioration concerning their performance behavior. Similarly, Wijaya et al. (2020) investigated the use of a sulfonated polyethersulfone nanofiltration membrane (3 kDa MWCO) for the condensation of an extracellular lipase expressed from A. oryzae. After nanofiltration, the concentrate stream presented an 83% increased lipase activity against the initial (unconcentrated) lipase solution. In addition, the biodiesel production of unrefined palm oil, using the concentrated lipase, resulted in relatively high yield of FAME (around 97%) compared to the FAME yield produced from the corresponding commercially available lipase Callera Trans L (CalT). Therefore, it is obvious that membrane technologies can provide significant advantages in enzymatic transesterification as low-cost and environmental-friendly downstream processes, both for biodiesel purification and for the recovery and reuse of biocatalysts resulting in a more sustainable biodiesel production technology (Kim et al., 2018).

7 Future prospects

The biocatalytic approaches in biodiesel synthesis have been proven, in many cases, advantageous to the alkaline or acidic synthesis, as the reaction can be performed in low quality, non-edible oils, with high acidity levels, resulting in reduced process cost (Sales et al., 2022). Biocatalytic esterification/transesterification can even take place in the presence of water if, for instance, acyltransferases are employed. However, the methanol-induced enzymatic inhibition is one of the most challenging bottlenecks of the field so far. To overcome that, different bioreactor setups and processing modes, or even longer alcohols, such as ethanol or 1-butanol, have been evaluated. Protein engineering of lipases or other enzymes of interest, like cutinases, which seem to be affected the most, could provide variants that are more stable and do not suffer from methanol inhibition. The combination of these variants with whole-cell systems is expected to provide sustainable processes for the production of second-generation biodiesel.

Concerning the bioreactor setup, membrane reactors membranes may play several roles during biodiesel production and purification. First, membranes may act as a selective barrier for biodiesel impurities, such as soap, catalysts, and other contaminants. Also, the removal of glycerol, which is a by-product of transesterification process, either operating in batch or in continuous mode, leads in higher reaction and conversion rates of the biodiesel produced. UF membranes showed the best results for refining biodiesel, using mostly polymeric materials such as PES, PAN and regenerated cellulose. Another key role that the membranes can achieve is the concentration of liquid lipase mixtures after transesterification for their subsequent reuse, making lipase catalyzed production of biodiesel more economical. It should be noted also that bioreactors are often integrated with automation systems, allowing for the control and optimization of important parameters such as temperature, agitation, and pH. Thus, the application of such systems in biodiesel production is expected to increase significantly in the coming years.

Furthermore, in the last few years, researchers focused on the lipase immobilization on commercial or modified membranes. This procedure shows promising results even after multiple transesterification cycles due to enhanced stability of the immobilized enzyme. Membrane immobilization could be an effective way of enzyme’s activity protection during biodiesel production. This direction of the formulation of biocatalyst could be especially beneficial for the simultaneous transesterification reaction and separation of by-products, as well as for the scale-up of the biodiesel production process. However, in order to enhance the use of immobilized enzymes in industrial processes, more attention is required to the immobilization techniques and operational conditions depending on the specific characteristics of each transesterification process case.

Statements

Author contributions

AS: Writing–original draft, Writing–review and editing. AM: Writing–original draft, Writing–review and editing. ET: Writing–original draft, Writing–review and editing, Conceptualization, Supervision. SP: Conceptualization, Supervision, Writing–original draft, Writing–review and editing. IP: Supervision, Writing–original draft, Writing–review and editing, Conceptualization.

Funding

The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This research has been co-financed by the European Regional Development Fund of the European Union and Greek national funds through the Operational Program Competitiveness, Entrepreneurship and Innovation, under the call RESEARCH—CREATE—INNOVATE (project code: Τ2ΕDΚ-00573). The Research implemented at the University of Crete was supported by the University of Crete Research Committee funds (Project Code Number 11512).

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

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Summary

Keywords

biodiesel, lipase, biocatalysis, whole-cell biocatalysts, membrane bioreactors, transesterification

Citation

Spanou A, Moschona A, Theodosiou E, Patsios SI and Pavlidis IV (2024) Novel concepts for the biocatalytic synthesis of second-generation biodiesel. Front. Catal. 4:1360702. doi: 10.3389/fctls.2024.1360702

Received

23 December 2023

Accepted

01 February 2024

Published

16 February 2024

Volume

4 - 2024

Edited by

Frank Hollmann, Delft University of Technology, Netherlands

Reviewed by

José Cleiton Sousa dos Santos, University of International Integration of Afro-Brazilian Lusophony, Brazil

Sharad Sarak, University of Minnesota Twin Cities, United States

Updates

Copyright

*Correspondence: Ioannis V. Pavlidis,

Disclaimer

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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