Frontiers in Genetics

Case Report

Published on 17 Feb 2025

Case report: A novel intronic JMJD6 likely pathogenic variant (c.941+75G > T) associated with congenital eyelid coloboma in one of the identical twin sisters

in Genetics of Common and Rare Diseases

Xin Li
Yuqi Zhang
Gang Chai
Weijie Su
Yan Zhang

Frontiers in Genetics

doi 10.3389/fgene.2025.1536000

1,786 views

Original Research

Published on 17 Feb 2025

Role of PD-L1 in mediating the effect of lipid on ulcerative colitis: a mediation Mendelian randomization study

in Statistical Genetics and Methodology

Peihong Li
Yiwen Wang
Hongyi Hu
Boyun Sun

Frontiers in Genetics

doi 10.3389/fgene.2025.1390605

2,476 views
1 citation

Original Research

Published on 17 Feb 2025

Alteration of chromatin states perturb the transcription regulation of gene during hydronephrosis

in RNA

Xiao-Hui Wang
Shu-Feng Zhang
Hai-Ying Wu
Jian Gao
Lin Wang
Yao Yin
Xuhui Wang

Frontiers in Genetics

doi 10.3389/fgene.2025.1396073

2,215 views

Methods

Published on 17 Feb 2025

WCSGNet: a graph neural network approach using weighted cell-specific networks for cell-type annotation in scRNA-seq

in Computational Genomics

Yi-Ran Wang
Pu-Feng Du

Frontiers in Genetics

doi 10.3389/fgene.2025.1553352

3,482 views
2 citations

Original Research

Published on 13 Feb 2025

Distinct gene signatures define the epithelial cell features of mucinous appendiceal neoplasms and pseudomyxoma metastases

in Cancer Genetics and Oncogenomics

Carlos Ayala
Anuja Sathe
Xiangqi Bai
Susan M. Grimes
Jeanne Shen
George A. Poultsides
Byrne Lee
Hanlee P. Ji

Frontiers in Genetics

doi 10.3389/fgene.2025.1536982

3,550 views
3 citations

Editorial

Published on 13 Feb 2025

Editorial: Advances and trends in gene expression, regulation, and phenotypic variation in livestock science: a comprehensive review of methods and technologies

in Livestock Genomics

Priyanka Banerjee
Andressa Oliveira de Lima
Loan T. Nguyen
Wellison J. S. Diniz

Frontiers in Genetics

doi 10.3389/fgene.2025.1565301

1,898 views
1 citation

Original Research

Published on 13 Feb 2025

A comparison of design algorithms for choosing the training population in genomic models

in Statistical Genetics and Methodology

Alexandra Stadler
Werner G. Müller
Andreas Futschik

Frontiers in Genetics

doi 10.3389/fgene.2024.1462855

1,985 views
1 citation

Original Research

Published on 13 Feb 2025

Genetic and metabolic characterization of individual differences in liver fat accumulation in Atlantic salmon

in Livestock Genomics

Siri S. Horn
Anna K. Sonesson
Aleksei Krasnov
Muhammad L. Aslam
Borghild Hillestad
Bente Ruyter

Frontiers in Genetics

doi 10.3389/fgene.2025.1512769

2,979 views
2 citations

Original Research

Published on 11 Feb 2025

Dual graph-embedded fusion network for predicting potential microbe-disease associations with sequence learning

in Computational Genomics

Junlong Wu
Liqi Xiao
Liu Fan
Lei Wang
Xianyou Zhu

Frontiers in Genetics

doi 10.3389/fgene.2025.1511521

1,650 views
1 citation

Review

Published on 11 Feb 2025

Moss-pathogen interactions: a review of the current status and future opportunities

in Genomics of Plants and the Phytoecosystem

Huan Zhang
Qilin Yang
Leyi Wang
Huawei Liu
Daoyuan Zhang
Cheng-Guo Duan
Xiaoshuang Li

Frontiers in Genetics

doi 10.3389/fgene.2025.1539311

3,704 views
2 citations

Original Research

Published on 10 Feb 2025

ADAM-multi: software to simulate complex breeding programs for animals and plants with different ploidy levels and generalized genotypic effect models to account for multiple alleles

in Statistical Genetics and Methodology

Thinh Tuan Chu
Just Jensen

Frontiers in Genetics

doi 10.3389/fgene.2025.1513615

2,550 views
1 citation

Data Report

Published on 10 Feb 2025

Exploring the taxonomical and functional profiles of marine microorganisms in Submarine Groundwater Discharge vent water from Mabini, Batangas, Philippines through metagenome-assembled genomes

in Computational Genomics

Joshua T. Veluz
Laurence Anthony N. Mallari
Paul Christian T. Gloria
Maria Auxilia T. Siringan

Frontiers in Genetics

doi 10.3389/fgene.2025.1522253

3,605 views

Original Research

Published on 07 Feb 2025

Sequencing whole genomes of the West Javanese population in Indonesia reveals novel variants and improves imputation accuracy

in Evolutionary and Population Genetics

Edwin Ardiansyah
Anca-Lelia Riza
Sofiati Dian
Ahmad Rizal Ganiem
Bachti Alisjahbana
Todia P. Setiabudiawan
Arjan van Laarhoven
Reinout van Crevel
Vinod Kumar

Frontiers in Genetics

doi 10.3389/fgene.2024.1492602

4,014 views
3 citations

Editorial

Published on 07 Feb 2025

Editorial: The non-coding RNA world in animals and plants

in RNA

Lingling Wang
Bin Hu
Min-Jin Han
Q.-Z. Zhou

Frontiers in Genetics

doi 10.3389/fgene.2025.1558406

1,820 views

Original Research

Published on 06 Feb 2025

Exploring the relationship between sepsis and Golgi apparatus dysfunction: bioinformatics insights and diagnostic marker discovery

in Computational Genomics

Wanli Ma
Xinyi Liu
Ran Yu
Jiannan Song
Lina Hou
Ying Guo
Hongwei Wu
Dandan Feng
Qi Zhou
Haibo Li

Frontiers in Genetics

doi 10.3389/fgene.2025.1483493

3,285 views
1 citation

Original Research

Published on 06 Feb 2025

Noncoding RNA profiling in omentum adipose tissue from obese patients and the identification of novel metabolic biomarkers

in RNA

Yongjiao Zhang
Ao Chen
Sumei Lu
Dong Liu
Xiaolei Xuan
Xiaofei Lei
Mingwei Zhong
Fei Gao

Frontiers in Genetics

doi 10.3389/fgene.2025.1533637

1,999 views
2 citations

Original Research

Published on 06 Feb 2025

Negative frequency-dependent selection through variations in seedling fitness due to genetic differentiation of parents’ pair in a tropical rainforest tree, Rubroshorea curtisii (Dipterocarpaceae)

in Evolutionary and Population Genetics

Naoki Tani
Chin Hong Ng
Soon Leong Lee
Chai Ting Lee
Norwati Muhammad
Toshiaki Kondo
Yoshihiko Tsumura
Saori Sugiyama
Kaoru Niiyama
Azizi Ripin

Frontiers in Genetics

doi 10.3389/fgene.2025.1552024

1,861 views
1 citation

Editorial

Published on 05 Feb 2025

Editorial: Towards the embedding of artificial intelligence into synthetic organisms: engineering intelligence in microorganisms

in Computational Genomics

Martín Eduardo Gutiérrez
Rafael Lahoz-Beltrá
Alberto J. Donayre-Torres

Frontiers in Genetics

doi 10.3389/fgene.2025.1562092

1,891 views

Original Research

Published on 04 Feb 2025

Enhancing the utility of polygenic scores in Alzheimer’s disease through systematic curation and annotation

in Genetics of Aging

Savannah Mwesigwa
Yulin Dai
Nitesh Enduru
Zhongming Zhao

Frontiers in Genetics

doi 10.3389/fgene.2025.1507395

2,226 views
1 citation

Original Research

Published on 04 Feb 2025

A structural genomics approach to investigate Dystrophin mutations and their impact on the molecular pathways of Duchenne muscular dystrophy

in Computational Genomics

Abdelbaset Mohamed Elasbali
Farah Anjum
Osama A. AlKhamees
Waleed Abu Al-Soud
Mohd Adnan
Anas Shamsi
Md. Imtaiyaz Hassan

Frontiers in Genetics

doi 10.3389/fgene.2025.1517707

3,647 views

Review

Published on 04 Feb 2025

Systematic review and meta-analysis of the impact of abnormal expression of long non coding RNA on the prognosis of acute myeloid leukemia

in RNA

Guihong Liu
Liangliang Sun
Peng Lv
Rong Qiao
Lihang Wang
Arong Jin

Frontiers in Genetics

doi 10.3389/fgene.2025.1524449

2,506 views
2 citations

Original Research

Published on 04 Feb 2025

Genome-wide identification of oat TCP gene family and expression patterns under abiotic stress

in Genomics of Plants and the Phytoecosystem

Jiaming Nie
Hongbin Zhao
Xiaodong Guo
Tao Zhang
Bing Han
Huiyan Liu

Frontiers in Genetics

doi 10.3389/fgene.2025.1533562

2,772 views
1 citation

Original Research

Published on 04 Feb 2025

Circular RNA microarray expression profile and potential function of circDOCK1 in colorectal cancer

in Cancer Genetics and Oncogenomics

Guojing Zhang
Xiaoyan Wu
Hongmin Fu
Daqing Sun

Frontiers in Genetics

doi 10.3389/fgene.2025.1443876

1,905 views

Review

Published on 03 Feb 2025

Fresh-cut watermelon: postharvest physiology, technology, and opportunities for quality improvement

in Genomics of Plants and the Phytoecosystem

Ebenezer Quandoh
Karin Albornoz

Frontiers in Genetics

doi 10.3389/fgene.2025.1523240

6,051 views
5 citations

16,548 articles

articles

Case report: A novel intronic JMJD6 likely pathogenic variant (c.941+75G > T) associated with congenital eyelid coloboma in one of the identical twin sisters

Role of PD-L1 in mediating the effect of lipid on ulcerative colitis: a mediation Mendelian randomization study

Alteration of chromatin states perturb the transcription regulation of gene during hydronephrosis

WCSGNet: a graph neural network approach using weighted cell-specific networks for cell-type annotation in scRNA-seq

Distinct gene signatures define the epithelial cell features of mucinous appendiceal neoplasms and pseudomyxoma metastases

Editorial: Advances and trends in gene expression, regulation, and phenotypic variation in livestock science: a comprehensive review of methods and technologies

A comparison of design algorithms for choosing the training population in genomic models

Genetic and metabolic characterization of individual differences in liver fat accumulation in Atlantic salmon

Dual graph-embedded fusion network for predicting potential microbe-disease associations with sequence learning

Moss-pathogen interactions: a review of the current status and future opportunities

ADAM-multi: software to simulate complex breeding programs for animals and plants with different ploidy levels and generalized genotypic effect models to account for multiple alleles

Exploring the taxonomical and functional profiles of marine microorganisms in Submarine Groundwater Discharge vent water from Mabini, Batangas, Philippines through metagenome-assembled genomes

Sequencing whole genomes of the West Javanese population in Indonesia reveals novel variants and improves imputation accuracy

Editorial: The non-coding RNA world in animals and plants

Exploring the relationship between sepsis and Golgi apparatus dysfunction: bioinformatics insights and diagnostic marker discovery

Noncoding RNA profiling in omentum adipose tissue from obese patients and the identification of novel metabolic biomarkers

Negative frequency-dependent selection through variations in seedling fitness due to genetic differentiation of parents’ pair in a tropical rainforest tree, Rubroshorea curtisii (Dipterocarpaceae)

Editorial: Towards the embedding of artificial intelligence into synthetic organisms: engineering intelligence in microorganisms

Enhancing the utility of polygenic scores in Alzheimer’s disease through systematic curation and annotation

A structural genomics approach to investigate Dystrophin mutations and their impact on the molecular pathways of Duchenne muscular dystrophy

Systematic review and meta-analysis of the impact of abnormal expression of long non coding RNA on the prognosis of acute myeloid leukemia

Genome-wide identification of oat TCP gene family and expression patterns under abiotic stress

Circular RNA microarray expression profile and potential function of circDOCK1 in colorectal cancer

Fresh-cut watermelon: postharvest physiology, technology, and opportunities for quality improvement