Frontiers in Genetics | Computational Genomics

Original Research

Published on 04 Jan 2023

SADLN: Self-attention based deep learning network of integrating multi-omics data for cancer subtype recognition

in Computational Genomics

Qiuwen Sun
Lei Cheng
Ao Meng
Shuguang Ge
Jie Chen
Longzhen Zhang
Ping Gong

Frontiers in Genetics

doi 10.3389/fgene.2022.1032768

3,168 views
11 citations

Original Research

Published on 04 Jan 2023

A four-lncRNA risk signature for prognostic prediction of osteosarcoma

in Computational Genomics

Huanlong Liu
Chao Chen
Long Liu
Zengtao Wang

Frontiers in Genetics

doi 10.3389/fgene.2022.1081478

1,736 views
1 citation

Original Research

Published on 04 Jan 2023

Identification of a nucleotide metabolism-related signature to predict prognosis and guide patient care in hepatocellular carcinoma

in Computational Genomics

Yu Li
Chunyan Wu
Yingnan Ge
Xi Chen
Li Zhu
Ling Chu
Jia Wang
Meiling Yan
Hao Deng

Frontiers in Genetics

doi 10.3389/fgene.2022.1089291

1,748 views
4 citations

Original Research

Published on 04 Jan 2023

A classification method of gastric cancer subtype based on residual graph convolution network

in Computational Genomics

Can Liu
Yuchen Duan
Qingqing Zhou
Yongkang Wang
Yong Gao
Hongxing Kan
Jili Hu

Frontiers in Genetics

doi 10.3389/fgene.2022.1090394

4,059 views
9 citations

Editorial

Published on 04 Jan 2023

Editorial: Long-read sequencing—Pitfalls, benefits and success stories

in Computational Genomics

Inken Wohlers
Shilpa Garg
Jayne Y. Hehir-Kwa

Frontiers in Genetics

doi 10.3389/fgene.2022.1114542

3,047 views
7 citations

Editorial

Published on 04 Jan 2023

Editorial: Explainable, trustworthy and responsive intelligent processing of biological resources integrating data, information, knowledge, and wisdom—Volume II

in Computational Genomics

Yucong Duan
Yungang Xu

Frontiers in Genetics

doi 10.3389/fgene.2022.1114441

1,081 views
1 citation

Original Research

Published on 04 Jan 2023

Relationship between the image characteristics of artificial intelligence and EGFR gene mutation in lung adenocarcinoma

in Computational Genomics

Guoping Zhou
Shuhua Xu
Xiaoli Liu
Jingjun Ge
Qiyu He
Weikang Cao
Junning Ding
Xinghua Kai

Frontiers in Genetics

doi 10.3389/fgene.2022.1090180

2,306 views
2 citations

Original Research

Published on 04 Jan 2023

A microarray data analysis investigating the pathogenesis and potential biomarkers of autophagy and ferroptosis in intervertebral disc degeneration

in Computational Genomics

Wenhao Kuang
Cong Jiang
Cheng Yu
Jinwei Hu
Yang Duan
Zhong Chen

Frontiers in Genetics

doi 10.3389/fgene.2022.1090467

4,784 views
1 citation

Original Research

Published on 04 Jan 2023

A machine learning-based approach to ERα bioactivity and drug ADMET prediction

in Computational Genomics

Tianbo An
Yueren Chen
Yefeng Chen
Leyu Ma
Jingrui Wang
Jian Zhao

Frontiers in Genetics

doi 10.3389/fgene.2022.1087273

2,697 views
8 citations

Original Research

Published on 04 Jan 2023

A pan-cancer analysis reveals role of clusterin (CLU) in carcinogenesis and prognosis of human tumors

in Computational Genomics

Yizhe Fu
Qiao Du
Tiehan Cui
Yuying Lu
Guangliang Niu

Frontiers in Genetics

doi 10.3389/fgene.2022.1056184

4,151 views
10 citations

Original Research

Published on 04 Jan 2023

Breast cancer detection: Shallow convolutional neural network against deep convolutional neural networks based approach

in Computational Genomics

Himanish Shekhar Das
Akalpita Das
Anupal Neog
Saurav Mallik
Kangkana Bora
Zhongming Zhao

Frontiers in Genetics

doi 10.3389/fgene.2022.1097207

7,283 views
23 citations

Original Research

Published on 14 Dec 2022

Predicting gene expression from histone modifications with self-attention based neural networks and transfer learning

in Computational Genomics

Yuchi Chen
Minzhu Xie
Jie Wen

Frontiers in Genetics

doi 10.3389/fgene.2022.1081842

4,827 views
10 citations

Original Research

Published on 14 Dec 2022

A novel diagnostic model for predicting immune microenvironment subclass based on costimulatory molecules in lung squamous carcinoma

in Computational Genomics

Fangfang Duan
Weisen Wang
Wenyu Zhai
Junye Wang
Zerui Zhao
Lie Zheng
Bingyu Rao
Yuheng Zhou
Hao Long
Yaobin Lin

Frontiers in Genetics

doi 10.3389/fgene.2022.1078790

2,936 views

Original Research

Published on 13 Dec 2022

A hypoxia risk score for prognosis prediction and tumor microenvironment in adrenocortical carcinoma

in Computational Genomics

Yuanyuan Deng
Huihuang Li
Jinglan Fu
Ying Pu
Ying Zhang
Shijing Chen
Shiyu Tong
Huixia Liu

Frontiers in Genetics

doi 10.3389/fgene.2022.796681

3,582 views

Brief Research Report

Published on 13 Dec 2022

Substance abuse and the risk of severe COVID-19: Mendelian randomization confirms the causal role of opioids but hints a negative causal effect for cannabinoids

in Computational Genomics

M. Reza Jabalameli
Zhengdong D. Zhang

Frontiers in Genetics

doi 10.3389/fgene.2022.1070428

4,412 views
2 citations

Original Research

Published on 09 Dec 2022

TP53-related signature for predicting prognosis and tumor microenvironment characteristics in bladder cancer: A multi-omics study

in Computational Genomics

Yuting Tao
Xia Li
Yushan Zhang
Liangyu He
Qinchen Lu
Yaobang Wang
Lixin Pan
Zhenxing Wang
Chao Feng
Yuanliang Xie

Frontiers in Genetics

doi 10.3389/fgene.2022.1057302

5,265 views
10 citations