Frontiers in Genetics | Livestock Genomics

Original Research

Published on 12 Nov 2021

A High-Density Genetic Linkage Map and Fine Mapping of QTL For Feed Conversion Efficiency in Common Carp (Cyprinus carpio)

in Livestock Genomics

Xiaofeng Zhang
Peixian Luan
Dingchen Cao
Guo Hu

Frontiers in Genetics

doi 10.3389/fgene.2021.778487

4,298 views
16 citations

Original Research

Published on 03 Nov 2021

Towards a Cost-Effective Implementation of Genomic Prediction Based on Low Coverage Whole Genome Sequencing in Dezhou Donkey

in Livestock Genomics

Changheng Zhao
Jun Teng
Xinhao Zhang
Dan Wang
Xinyi Zhang
Shiyin Li
Xin Jiang
Haijing Li
Chao Ning
Qin Zhang

Frontiers in Genetics

doi 10.3389/fgene.2021.728764

5,040 views
18 citations

Original Research

Published on 02 Nov 2021

The Contribution of Copy Number Variants and Single Nucleotide Polymorphisms to the Additive Genetic Variance of Carcass Traits in Cattle

in Livestock Genomics

Pierce Rafter
Isobel Claire Gormley
Andrew C. Parnell
Saeid Naderi
Donagh P. Berry

Frontiers in Genetics

doi 10.3389/fgene.2021.761503

3,830 views
4 citations

Original Research

Published on 01 Nov 2021

Quantitative Genetics of Smoltification Status at the Time of Seawater Transfer in Atlantic Salmon (Salmo Salar)

in Livestock Genomics

Hooi Ling Khaw
Bjarne Gjerde
Solomon A. Boison
Elise Hjelle
Gareth F. Difford

Frontiers in Genetics

doi 10.3389/fgene.2021.696893

6,920 views
16 citations

Review

Published on 01 Nov 2021

Progress on the Regulation of Ruminant Milk Fat by Noncoding RNAs and ceRNAs

in Livestock Genomics

QinYue Lu
Zhi Chen
Dejun Ji
Yongjiang Mao
Qianming Jiang
Zhangping Yang
Juan J. Loor

Frontiers in Genetics

doi 10.3389/fgene.2021.733925

4,841 views
14 citations

Original Research

Published on 29 Oct 2021

Evaluation of Seasonal Heat Stress on Transcriptomic Profiles and Global DNA Methylation of Bovine Oocytes

in Livestock Genomics

Fabian A Diaz
Emilio J Gutierrez-Castillo
Brittany A Foster
Paige T Hardin
Kenneth R Bondioli
Zongliang Jiang

Frontiers in Genetics

doi 10.3389/fgene.2021.699920

7,137 views
29 citations

Original Research

Published on 28 Oct 2021

Accuracy of Genomic Prediction for Milk Production Traits in Philippine Dairy Buffaloes

in Livestock Genomics

Jesus Rommel V. Herrera
Ester B. Flores
Naomi Duijvesteijn
Nasir Moghaddar
Julius H. van der Werf

Frontiers in Genetics

doi 10.3389/fgene.2021.682576

4,194 views
12 citations

Brief Research Report

Published on 28 Oct 2021

Single-cell RNA Sequencing Reveals Heterogeneity of Cultured Bovine Satellite Cells

in Livestock Genomics

Pengcheng Lyu
Yumin Qi
Zhijian J. Tu
Honglin Jiang

Frontiers in Genetics

doi 10.3389/fgene.2021.742077

8,434 views
17 citations

Original Research

Published on 28 Oct 2021

Whole-Genome SNP Characterisation Provides Insight for Sustainable Use of Local South African Livestock Populations

in Livestock Genomics

Esté van Marle-Köster
Simon Frederick Lashmar
Anel Retief
Carina Visser

Frontiers in Genetics

doi 10.3389/fgene.2021.714194

4,939 views
9 citations

Brief Research Report

Published on 22 Oct 2021

Optimizing Sequencing Resources in Genotyped Livestock Populations Using Linear Programming

in Livestock Genomics

Hao Cheng
Keyu Xu
Jinghui Li
Kuruvilla Joseph Abraham

Frontiers in Genetics

doi 10.3389/fgene.2021.740340

2,005 views
3 citations

Correction

Published on 22 Oct 2021

Corrigendum: Novel lncRNA lncFAM200B: Molecular Characteristics and Effects of Genetic Variants on Promoter Activity and Cattle Body Measurement Traits

in Livestock Genomics

Sihuan Zhang
Zihong Kang
Xiaomei Sun
Xiukai Cao
Chuanying Pan
Ruihua Dang
Chuzhao Lei
Hong Chen
Xianyong Lan

Frontiers in Genetics

doi 10.3389/fgene.2021.770932

1,361 views

Review

Published on 21 Oct 2021

Aspects of Molecular Genetics in Dromedary Camel

in Livestock Genomics

Mohammed Piro

Frontiers in Genetics

doi 10.3389/fgene.2021.723181

6,105 views
10 citations

Original Research

Published on 21 Oct 2021

An Integrative Analysis of Transcriptome and GWAS Data to Identify Potential Candidate Genes Influencing Meat Quality Traits in Pigs

in Livestock Genomics

Xianxian Liu
Junjie Zhang
Xinwei Xiong
Congying Chen
Yuyun Xing
Yanyu Duan
Shijun Xiao
Bin Yang
Junwu Ma

Frontiers in Genetics

doi 10.3389/fgene.2021.748070

7,690 views
22 citations

Brief Research Report

Published on 19 Oct 2021

Comparative Signatures of Selection Analyses Identify Loci Under Positive Selection in the Murrah Buffalo of India

in Livestock Genomics

Shiv K. Tyagi
Arnav Mehrotra
Akansha Singh
Amit Kumar
Triveni Dutt
Bishnu P. Mishra
Ashwni K. Pandey

Frontiers in Genetics

doi 10.3389/fgene.2021.673697

6,453 views
18 citations

Original Research

Published on 18 Oct 2021

Integrated Network Analysis to Identify Key Modules and Potential Hub Genes Involved in Bovine Respiratory Disease: A Systems Biology Approach

in Livestock Genomics

Aliakbar Hasankhani
Abolfazl Bahrami
Negin Sheybani
Farhang Fatehi
Roxana Abadeh
Hamid Ghaem Maghami Farahani
Mohammad Reza Bahreini Behzadi
Ghazaleh Javanmard
Sadegh Isapour
Hosein Khadem

Frontiers in Genetics

doi 10.3389/fgene.2021.753839

8,896 views
20 citations

Original Research

Published on 18 Oct 2021

Taurine and Indicine Haplotype Representation in Advanced Generation Individuals From Three American Breeds

in Livestock Genomics

Tamar E. Crum
Robert D. Schnabel
Jared E. Decker
Jeremy F. Taylor

Frontiers in Genetics

doi 10.3389/fgene.2021.758394

6,056 views
3 citations

Original Research

Published on 15 Oct 2021

Ancient Mitogenomes Provide New Insights into the Origin and Early Introduction of Chinese Domestic Donkeys

in Livestock Genomics

Linying Wang
Guilian Sheng
Michaela Preick
Songmei Hu
Tao Deng
Ulrike H. Taron
Axel Barlow
Jiaming Hu
Bo Xiao
Guojiang Sun

Frontiers in Genetics

doi 10.3389/fgene.2021.759831

4,665 views
5 citations

Editorial

Published on 15 Oct 2021

Editorial: Functional Annotation of Animal Genomes

in Livestock Genomics

Amanda Jane Chamberlain
Hans H. Cheng
Elisabetta Giuffra
Christa Kuehn
Christopher K. Tuggle
Huaijun Zhou

Frontiers in Genetics

doi 10.3389/fgene.2021.768626

3,424 views
4 citations

Original Research

Published on 14 Oct 2021

A Comprehensive Comparison of Haplotype-Based Single-Step Genomic Predictions in Livestock Populations With Different Genetic Diversity Levels: A Simulation Study

in Livestock Genomics

Andre C. Araujo
Paulo L. S. Carneiro
Hinayah R. Oliveira
Flavio S. Schenkel
Renata Veroneze
Daniela A. L. Lourenco
Luiz F. Brito

Frontiers in Genetics

doi 10.3389/fgene.2021.729867

5,129 views
9 citations

Original Research

Published on 14 Oct 2021

Genome-Wide Assessment Characteristics of Genes Overlapping Copy Number Variation Regions in Duroc Purebred Population

in Livestock Genomics

Zhipeng Wang
Yuanyuan Guo
Shengwei Liu
Qingli Meng

Frontiers in Genetics

doi 10.3389/fgene.2021.753748

3,418 views
15 citations

Data Report

Published on 12 Oct 2021

Chromosome-Level Genome Assembly of the Asian Red-Tail Catfish (Hemibagrus wyckioides)

in Livestock Genomics

Feng Shao
Huamei Pan
Ping Li
Luyun Ni
Yuan Xu
Zuogang Peng

Frontiers in Genetics

doi 10.3389/fgene.2021.747684

4,242 views
18 citations

Original Research

Published on 12 Oct 2021

Integrated Small RNA Sequencing, Transcriptome and GWAS Data Reveal microRNA Regulation in Response to Milk Protein Traits in Chinese Holstein Cattle

in Livestock Genomics

Wentao Cai
Cong Li
Junya Li
Jiuzhou Song
Shengli Zhang

Frontiers in Genetics

doi 10.3389/fgene.2021.726706

4,390 views
13 citations

Methods

Published on 11 Oct 2021

Single-Trait and Multiple-Trait Genomic Prediction From Multi-Class Bayesian Alphabet Models Using Biological Information

in Livestock Genomics

Zigui Wang
Hao Cheng

Frontiers in Genetics

doi 10.3389/fgene.2021.717457

3,342 views
4 citations

Original Research

Published on 11 Oct 2021

Genome-Wide Detection of Genetic Loci and Candidate Genes for Body Conformation Traits in Duroc × Landrace × Yorkshire Crossbred Pigs

in Livestock Genomics

Hui Zhang
Zhanwei Zhuang
Ming Yang
Rongrong Ding
Jianping Quan
Shenping Zhou
Ting Gu
Zheng Xu
Enqin Zheng
Gengyuan Cai

Frontiers in Genetics

doi 10.3389/fgene.2021.664343

6,382 views
33 citations

1,399 articles

articles

A High-Density Genetic Linkage Map and Fine Mapping of QTL For Feed Conversion Efficiency in Common Carp (Cyprinus carpio)

Towards a Cost-Effective Implementation of Genomic Prediction Based on Low Coverage Whole Genome Sequencing in Dezhou Donkey

The Contribution of Copy Number Variants and Single Nucleotide Polymorphisms to the Additive Genetic Variance of Carcass Traits in Cattle

Quantitative Genetics of Smoltification Status at the Time of Seawater Transfer in Atlantic Salmon (Salmo Salar)

Progress on the Regulation of Ruminant Milk Fat by Noncoding RNAs and ceRNAs

Evaluation of Seasonal Heat Stress on Transcriptomic Profiles and Global DNA Methylation of Bovine Oocytes

Accuracy of Genomic Prediction for Milk Production Traits in Philippine Dairy Buffaloes

Single-cell RNA Sequencing Reveals Heterogeneity of Cultured Bovine Satellite Cells

Whole-Genome SNP Characterisation Provides Insight for Sustainable Use of Local South African Livestock Populations

Optimizing Sequencing Resources in Genotyped Livestock Populations Using Linear Programming

Corrigendum: Novel lncRNA lncFAM200B: Molecular Characteristics and Effects of Genetic Variants on Promoter Activity and Cattle Body Measurement Traits

Aspects of Molecular Genetics in Dromedary Camel

An Integrative Analysis of Transcriptome and GWAS Data to Identify Potential Candidate Genes Influencing Meat Quality Traits in Pigs

Comparative Signatures of Selection Analyses Identify Loci Under Positive Selection in the Murrah Buffalo of India

Integrated Network Analysis to Identify Key Modules and Potential Hub Genes Involved in Bovine Respiratory Disease: A Systems Biology Approach

Taurine and Indicine Haplotype Representation in Advanced Generation Individuals From Three American Breeds

Ancient Mitogenomes Provide New Insights into the Origin and Early Introduction of Chinese Domestic Donkeys

Editorial: Functional Annotation of Animal Genomes

A Comprehensive Comparison of Haplotype-Based Single-Step Genomic Predictions in Livestock Populations With Different Genetic Diversity Levels: A Simulation Study

Genome-Wide Assessment Characteristics of Genes Overlapping Copy Number Variation Regions in Duroc Purebred Population

Chromosome-Level Genome Assembly of the Asian Red-Tail Catfish (Hemibagrus wyckioides)

Integrated Small RNA Sequencing, Transcriptome and GWAS Data Reveal microRNA Regulation in Response to Milk Protein Traits in Chinese Holstein Cattle

Single-Trait and Multiple-Trait Genomic Prediction From Multi-Class Bayesian Alphabet Models Using Biological Information

Genome-Wide Detection of Genetic Loci and Candidate Genes for Body Conformation Traits in Duroc × Landrace × Yorkshire Crossbred Pigs