Frontiers in Microbiomes

Review

Published on 27 Jun 2025

Chemistry, manufacturing, and controls for live microbial products: addressing classification challenges and enhancing process validation

in Host and Microbe Associations

Ralph Slijkerman
Rob van Dijk
Nasser Mohieddin
Ivana Ciarlante
Antal de Jong
Moira Monika Schuler

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1569348

3,000 views
1 citation

Review

Published on 26 Jun 2025

The integral role of the Black Soldier fly, Hermetia illucens L., microbiota in its life history

in Host and Microbe Associations

Dana Ment
Sapna Mishra

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1517715

3,487 views
1 citation

Original Research

Published on 23 Jun 2025

Adherence to Life’s Essential 8 enhances gut microbiota diversity and cognitive performance

in Host and Microbe Associations

Yannick N. Wadop
Jazmyn Muhammad
Rebecca Bernal
Claudia L. Satizabal
Alexa Beiser
Ramachandran S. Vasan
Ramnik Xavier
Tiffany Kautz
Sudha Seshadri
Jayandra Jung Himali

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1592023

2,017 views

Original Research

Published on 18 Jun 2025

Comparative assessment of Texas horned lizard (Phrynosoma cornutum) gut microbiome diversity and composition throughout transition from captivity to wild

in Host and Microbe Associations

Cameron R. Forehand
Sierra N. Smith
Forrest Nielsen
Blake Bauer
Jessa L. Watters
Ray W. Moody
Daniel J. Becker
Hayley Lanier
Katharine Marske
Cameron Siler

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1601442

2,356 views
2 citations

Original Research

Published on 06 Jun 2025

Dietary Codonopsis pilosula polysaccharides promote gut health and enhance immunity in Hu sheep

in Nutrition, Metabolism and the Microbiome

Qing Zhao
Wanning Li
Zilong Liu
Qiao Li
Youji Ma

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1589484

2,577 views

Editorial

Published on 03 Jun 2025

Editorial: Harnessing machine learning to decode plant-microbiome dynamics for sustainable agriculture

in Omics and Bioinformatics for Microbiomes

Mohsen Yoosefzadeh Najafabadi
Eman M. Khalaf
Mohamed Mysara
Ahmed M. El-Baz

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1602938

2,094 views
1 citation

Original Research

Published on 19 May 2025

Categorizing and characterizing intestinal dysbiosis: evaluating stool microbial test clinical utility

in Host and Microbe Associations

Lia Oliver
Marta Malagón
Sara Ramió-Pujol
Mireia Sánchez-Vizcaino
Roser Sánchez-Algans
Eva Lacosta
Marc Saéz-Zafra
Mariona Serra-Pagès
Xavier Aldeguer
Jesús Garcia-Gil

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1512257

4,149 views
3 citations

Systematic Review

Published on 16 May 2025

The role of gut microbiota in autoimmune disease progression and therapy: a comprehensive synthesis

in Host and Microbe Associations

Mohammad Adawi

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1553243

6,542 views
2 citations

Brief Research Report

Published on 15 May 2025

Comparative analysis of Illumina, PacBio, and nanopore for 16S rRNA gene sequencing of rabbit’s gut microbiota

in Omics and Bioinformatics for Microbiomes

Iliyass Biada
María Antonia Santacreu
Oscar González-Recio
Noelia Ibáñez-Escriche

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1587712

7,720 views
8 citations

Editorial

Published on 07 May 2025

Editorial: Interactions between natural and built environment microbiomes in a One Health context

in Environmental Microbiomes

Weitao Shuai
Bridget Hegarty
Alexander Mahnert
Erica Marie Hartmann

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1608228

1,516 views

Original Research

Published on 30 Apr 2025

Stability of oral and fecal microbiome at room temperature: impact on diversity

in Host and Microbe Associations

Blanca Rius-Sansalvador
David Bars-Cortina
Olfat Khannous-Lleiffe
Ainhoa Garcia-Serrano
Elisabet Guinó
Ester Saus
Toni Gabaldón
Victor Moreno
Mireia Obón-Santacana

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1334775

2,387 views
1 citation

Original Research

Published on 30 Apr 2025

Farm conditions shape microbial communities and their association with methane intensity in dairy cattle: insights from the rumen microbiome at the community level

in Environmental Microbiomes

Simon Roques
Lisanne Koning
Alex Bossers
Sanne van Gastelen
Dirkjan Schokker
Edoardo Zaccaria
Léon Šebek
Soumya K. Kar

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1540197

1,836 views

Mini Review

Published on 28 Apr 2025

Insights into human respiratory microbiome under dysbiosis and its analysis tool

in Host and Microbe Associations

Mehfooz Helal
Vinay Kumar Bari

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1549166

2,374 views

Editorial

Published on 24 Apr 2025

Editorial: Ecology, evolution, and biodiversity of microbiomes and viromes from extreme environments

in Environmental Microbiomes

Gareth Trubl
Lucie Malard
Janina Rahlff

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1604002

1,749 views

Original Research

Published on 22 Apr 2025

Optimisation of cutaneous microbiota sampling methodology

in Host and Microbe Associations

Dario Leonardo Balacco
Ajoy Bardhan
Hadeer Ibrahim
Sarah A. Kuehne
Melissa M. Grant
Josefine Hirschfeld
Adrian H. M. Heagerty
Iain L. Chapple

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1559981

4,140 views

Original Research

Published on 09 Apr 2025

Relationships between rumen methanogens and fungal communities and their response to changes in alfalfa forms and starch in sheep diets

in Host and Microbe Associations

Wenliang Guo
Meila Na
Shuwei Liu
Kenan Li
Haidong Du
Jing Zhang
Yu Zhang
Renhua Na
Yulan Liu

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1567462

1,699 views
3 citations

Original Research

Published on 09 Apr 2025

Effects of wetting events on mass timber surface microbial communities and VOC emissions: implications for building operation and occupant well-being

in Environmental Microbiomes

Gwynne Á. Mhuireach
Susan Collins
Leslie Dietz
Patrick Finn Horve
Aurélie Laguerre
Dale Northcutt
Jason Stenson
Kevin Van Den Wymelenberg
Elliott Gall
Mark Fretz

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1395519

3,840 views

Review

Published on 20 Mar 2025

Intestinal dysbiosis during pregnancy and microbiota-associated impairments in offspring

in Nutrition, Metabolism and the Microbiome

Yaa Abu
Sabita Roy

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1548650

4,941 views
10 citations

Original Research

Published on 10 Mar 2025

The effects of different dietary nutritional levels on meat quality, rumen microbiota, and muscle metabolomics in Tibetan Plateau yaks

in Nutrition, Metabolism and the Microbiome

Shengchun Xu
Shuxiang Wang
Jiyuan Zhang
Xun Wang
Yingkui Yang
Shengsheng Li
Yang Xiang
Hongxin Nie
Yuming Li
Ziming Zeng

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1545689

2,033 views
1 citation

Systematic Review

Published on 06 Mar 2025

Gut microbiota and type 2 diabetes associations: a meta-analysis of 16S studies and their methodological challenges

in Nutrition, Metabolism and the Microbiome

Jésica Lígia Picanço Machado
Ana Paula Schaan
Izabela Mamede
Gabriel Rocha Fernandes

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1506387

3,677 views
4 citations

Brief Research Report

Published on 05 Mar 2025

Probiotic supplementation prevents stress-impaired spatial learning and enhances the effects of environmental enrichment

in Nutrition, Metabolism and the Microbiome

Cassandra M. Flynn
Lara M. Blackburn
Qi Yuan

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1454909

2,715 views
1 citation

Review

Published on 03 Mar 2025

Postbiotics and their biotherapeutic potential for chronic disease and their feature perspective: a review

in Nutrition, Metabolism and the Microbiome

Zerihun Asefa
Abera Belay
Eyuel Welelaw
Meseret Haile

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1489339

9,020 views
19 citations

Original Research

Published on 18 Feb 2025

Unveiling host-genetic drivers of caecal microbial communities in chickens through genome-wide association studies

in Host and Microbe Associations

Ankit Hinsu
Xiaoxia Dai
Christos Dadousis
Melanie Hay
Bruno Fosso
Matteo Crotta
Ramesh Pandit
Javier Guitian
Fiona Tomley
Prakash Koringa

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1539923

2,711 views

Original Research

Published on 07 Feb 2025

Microbial partner (MiPner) analysis

in Environmental Microbiomes

Jeffrey L. Bennetzen
Josue Fernandez-Canela
Vienna Elmgreen
Shaugnessy R. McCann
Mary E. Norris
Xiangyu Deng
Philip Brailey-Crane

Frontiers in Microbiomes

doi 10.3389/frmbi.2024.1500798

1,576 views

220 articles

articles

Chemistry, manufacturing, and controls for live microbial products: addressing classification challenges and enhancing process validation

The integral role of the Black Soldier fly, Hermetia illucens L., microbiota in its life history

Adherence to Life’s Essential 8 enhances gut microbiota diversity and cognitive performance

Comparative assessment of Texas horned lizard (Phrynosoma cornutum) gut microbiome diversity and composition throughout transition from captivity to wild

Dietary Codonopsis pilosula polysaccharides promote gut health and enhance immunity in Hu sheep

Editorial: Harnessing machine learning to decode plant-microbiome dynamics for sustainable agriculture

Categorizing and characterizing intestinal dysbiosis: evaluating stool microbial test clinical utility

The role of gut microbiota in autoimmune disease progression and therapy: a comprehensive synthesis

Comparative analysis of Illumina, PacBio, and nanopore for 16S rRNA gene sequencing of rabbit’s gut microbiota

Editorial: Interactions between natural and built environment microbiomes in a One Health context

Stability of oral and fecal microbiome at room temperature: impact on diversity

Farm conditions shape microbial communities and their association with methane intensity in dairy cattle: insights from the rumen microbiome at the community level

Insights into human respiratory microbiome under dysbiosis and its analysis tool

Editorial: Ecology, evolution, and biodiversity of microbiomes and viromes from extreme environments

Optimisation of cutaneous microbiota sampling methodology

Relationships between rumen methanogens and fungal communities and their response to changes in alfalfa forms and starch in sheep diets

Effects of wetting events on mass timber surface microbial communities and VOC emissions: implications for building operation and occupant well-being

Intestinal dysbiosis during pregnancy and microbiota-associated impairments in offspring

The effects of different dietary nutritional levels on meat quality, rumen microbiota, and muscle metabolomics in Tibetan Plateau yaks

Gut microbiota and type 2 diabetes associations: a meta-analysis of 16S studies and their methodological challenges

Probiotic supplementation prevents stress-impaired spatial learning and enhances the effects of environmental enrichment

Postbiotics and their biotherapeutic potential for chronic disease and their feature perspective: a review

Unveiling host-genetic drivers of caecal microbial communities in chickens through genome-wide association studies

Microbial partner (MiPner) analysis