Your new experience awaits. Try the new design now and help us make it even better

ORIGINAL RESEARCH article

Front. Neurol.

Sec. Stroke

This article is part of the Research TopicRedefining Stroke Recovery: Current Trends and Recent AdvancesView all 9 articles

Cortical Morphometric Similarity Patterns and Molecular Signatures Across Ischemic Stroke Recovery

Provisionally accepted
Chen  XiuenChen XiuenLiang  JialanLiang JialanDeng  ChengdiDeng ChengdiYu  ZhilinYu ZhilinYe  ZimingYe ZimingQin  ChaoQin Chao*Tang  YanyanTang Yanyan*
  • The First Affiliated Hospital of Guangxi Medical University, Nanning, China

The final, formatted version of the article will be published soon.

Background Ischemic stroke is associated with widespread and dynamic brain structural alterations, but the relationship between these changes and underlying molecular signatures across different post-stroke stages remains unclear. Therefore, we examined the brain structural difference of patients with 3T high resolution magnetic resonance, further explored special molecular signatures across ischemic stroke recovery stages. Methods Among 170 participants were recruited, including 60 acute/subacute ischemic stroke patients, 59 chronic ischemic stroke patients, and 51 healthy controls. Morphometric similarity networks (MSNs) were constructed by calculating Pearson correlations between cortical morphometric feature vectors across 308 regions. Group differences in MSN strength were assessed using covariate-adjusted linear regression. We further applied partial least squares regression to link regional MSN differences with gene expression data from the Allen Human Brain Atlas, identifying molecular signatures across ischemic stroke recovery stages. Results Regional MSN differences differed by stroke stage, predominantly involving frontal-temporal cortices in acute/subacute ischemic stroke and widespread cortical areas in chronic ischemic stroke. Regional MSN differences were associated with cortical transcriptional gradients, identifying key stroke-related genes (e.g., KIF5B, C4orf3, APMAP, STOML1). Functional analysis highlighted molecular signatures linked to neuronal changing, axonal transport, and protein homeostasis. Conclusion Our findings demonstrate stage-specific morphometric differences and molecular signatures associated with different stages of ischemic stroke, highlighting regionally distinct structural and transcriptomic associations. These insights may facilitate targeted interventions aimed at improving functional outcomes across different stages of stroke.

Keywords: ischemic stroke, Morphometric similarity networks, cortical difference, Gene Expression, stroke recovery

Received: 10 Jun 2025; Accepted: 28 Oct 2025.

Copyright: © 2025 Xiuen, Jialan, Chengdi, Zhilin, Ziming, Chao and Yanyan. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence:
Qin Chao, mdqc2019@126.com
Tang Yanyan, yuji0301@126.com

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.