The field of molecular biology is experiencing a transformative era, driven by the synergistic potential of integrative multi-omics and computational pipelines tailored for precision therapeutics. At the core of physiological and pathological processes, proteins are paramount, yet their complex interactions and multifaceted roles continue to challenge researchers. Despite their central importance, a deep understanding of the comprehensive dynamic interactions and functions of proteins remains elusive. With recent advancements, multi-omics approaches now amalgamate rich datasets from genomics, transcriptomics, proteomics, and metabolomics to provide a panoramic view of cellular functionality. When paired with advanced computational models, such as machine learning and network analysis, these strategies enable precise reconstruction of protein networks, revelation of regulatory pathways, and innovative predictions of protein functions. However, a complete comprehension of protein interactions and their implications in disease remains incomplete.
This Research Topic aims to demystify protein functions and interactions through the seamless integration of multi-omics data with advanced computational methods, crucial for accelerated hit identification and drug discovery. By addressing critical questions regarding the orchestration of cellular processes by protein networks and how their dysregulation culminates in disease, this research avenue aims to significantly deepen our understanding of molecular biology. Moreover, this initiative seeks to advance the predictive potential of computational models by harnessing multi-omics data integration, identifying novel biomarkers, and uncovering new therapeutic targets. We invite contributions from researchers exploring the convergence of diverse omics disciplines with computational advancements to pioneer the next frontiers of protein research.
To gather further insights in this complex research domain, we welcome articles addressing, but not limited to, the following themes:
Computational strategies for the prediction and validation of novel protein functions. Advanced integration techniques for multi-omics datasets to elucidate protein interaction networks. Application of artificial intelligence and machine learning in interpreting complex omics data. Evaluation of protein interactions and their significance in disease pathogenesis and progression. Discovery and clinical validation of novel biomarkers through multi-omics analyses. Innovations in network analysis and structural bioinformatics to visualize and interpret protein dynamics. Target identification and drug discovery. Types of articles accepted for this Research Topic include Original Research, Review Articles, Short Communications, Methodology Articles, Application Notes, Data Resources, Software Articles, Perspective and Opinion, Case Studies, and Editorials. We encourage submissions that highlight state-of-the-art tools, methodologies, and interdisciplinary approaches aimed at elucidating protein biology at the molecular level. Through this collective effort, we aim to foster an enriched understanding of protein functions and expedite translational research, bridging the gap from laboratory to clinical applications.
Article types and fees
This Research Topic accepts the following article types, unless otherwise specified in the Research Topic description:
Brief Research Report
Case Report
Data Report
Editorial
FAIR² Data
General Commentary
Hypothesis and Theory
Methods
Mini Review
Articles that are accepted for publication by our external editors following rigorous peer review incur a publishing fee charged to Authors, institutions, or funders.
Article types
This Research Topic accepts the following article types, unless otherwise specified in the Research Topic description:
Brief Research Report
Case Report
Data Report
Editorial
FAIR² Data
General Commentary
Hypothesis and Theory
Methods
Mini Review
Opinion
Original Research
Perspective
Review
Systematic Review
Technology and Code
Keywords: Multi-omics, Protein function, Protein-protein interaction, Computational biology, Systems biology, Structural bioinformatics, Network biology, Big data analytics, Artificial intelligence, Molecular mechanisms
Important note: All contributions to this Research Topic must be within the scope of the section and journal to which they are submitted, as defined in their mission statements. Frontiers reserves the right to guide an out-of-scope manuscript to a more suitable section or journal at any stage of peer review.