ORIGINAL RESEARCH article

Front. Microbiol., 31 August 2022

Sec. Microbe and Virus Interactions with Plants

Volume 13 - 2022 | https://doi.org/10.3389/fmicb.2022.970731

Morphology and multigene phylogeny reveal a new order and a new species of wood-inhabiting basidiomycete fungi (Agaricomycetes)

  • 1. Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, China

  • 2. Yunnan Key Laboratory of Plateau Wetland Conservation, Restoration and Ecological Services, Southwest Forestry University, Kunming, China

  • 3. College of Biodiversity Conservation, Southwest Forestry University, Kunming, China

  • 4. Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Science, Kunming, China

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Abstract

Dead wood-associated fungi play an important role in wood degradation and the recycling of organic matter in the forest ecological system. Xenasmataceae is a cosmopolitan group of wood-rotting fungi that grows on tropical, subtropical, temperate, and boreal vegetation. In this study, a new fungal order, Xenasmatales, is introduced based on both morphology and multigene phylogeny to accommodate Xenasmataceae. According to the internal transcribed spacer and nuclear large subunit (ITS+nLSU) and nLSU-only analyses of 13 orders, Xenasmatales formed a single lineage and then grouped with orders Atheliales, Boletales, and Hymenochaetales. The ITS dataset revealed that the new taxon Xenasmatella nigroidea clustered into Xenasmatella and was closely grouped with Xenasmatella vaga. In the present study, Xenasmatella nigroidea collected from Southern China is proposed as a new taxon, based on a combination of morphology and phylogeny. Additionally, a key to the Xenasmatella worldwide is provided.

Introduction

Among eukaryotic microorganisms, wood-decaying fungi interact positively with dead wood, playing a fundamental ecological role as decomposers of plants in the fungal tree of life (James et al., 2020). Wood-associated fungi are cosmopolitan and rich in diversity since they grow on tropical, subtropical, temperate, and boreal vegetation (Gilbertson and Ryvarden, 1987; Núñez and Ryvarden, 2001; Bernicchia and Gorjón, 2010; Dai, 2012; Ryvarden and Melo, 2014; Dai et al., 2015, 2021; Wu et al., 2020).

Xenasmataceae Oberw., a typical wood-associated fungal group mainly distributed in the tropics was discovered by Oberwinkler (1966), and typified by Xenasma Donk. Three genera, namely, Xenasma, Xenasmatella Oberw., and Xenosperma Oberw., have been accommodated in this family, however, higher-level classification of the order has not been designated. The tenth edition of the Dictionary of the Fungi showed that Xenasmataceae belongs to Polyporales Gäum., and consists of three genera (Kirk et al., 2008). MycoBank indicates that Xenasmataceae has a higher classification within Polyporales, although the Index Fungorum shows that Xenasmataceae belongs to the order Russulales.

High phylogenetic diversity among corticioid homobasidiomycetes suggests a close relationship among Radulomyces M.P. Christ., Xenasmatella, and Coronicium J. Erikss. and Ryvarden. Xenasma pseudotsugae (Burt) J. Erikss. nested into the euagarics clade, in which it grouped with Coronicium and Radulomyces. The three taxa of Radulomyces grouped together with Phlebiella pseudotsugae (Burt) K.H. Larss. and Hjortstam and Coronicium alboglaucum (Bourdot and Galzin) Jülich, and were composed of a rather confusing group with no obvious morphological features or ecological specialization to tie these three genera together (Larsson et al., 2004). The classification of corticioid fungi with 50 putative families from published preliminary analyses and phylogenies of sequence data showed that three species of Xenasmatella formed a single lineage with strong support within the unplaced Phlebiella family, in which this clade was unclaimed to any orders (Larsson, 2007). A higher-level phylogenetic classification of the Kingdom Fungi revealed that the Phlebiella clade and Jaapia clade do not show affinities within any orders (Hibbett et al., 2007). An outline of all genera of Basidiomycota with combined SSU, ITS, LSU, tef1, rpb1, and rpb2 datasets showed that Xenasmatella was assigned to Xenasmataceae within the order Russulales (He et al., 2019). Therefore, there is debate on the classification at the order level for the Xenasmataceae.

Recently, Xenasmatella has been studied deeply on the basis of morphology and phylogeny. Phlebiella P. Karst. was deemed to have not been legitimately published previously, and the name Xenasmatella was accepted (Duhem, 2010; Larsson et al., 2020; Maekawa, 2021). Molecular systematics involving Xenasmatella was carried out recently. On the basis of morphological and molecular identification, Zong et al. (2021) studied the sequences of 27 fungal specimens representing 24 species between the Xenasmatella clade and related orders; and the Xenasmatella clade formed a single lineage and three new species, namely, X. rhizomorpha C.L. Zhao, X. tenuis C.L. Zhao, and X. xinpingensis C.L. Zhao. Both the MycoBank database (http://www.MycoBank.org) and Index Fungorum (http://www.indexfungorum.org, accessed on June 20, 2022) have recorded 41 specific and infraspecific names in Xenasmatella. To date, the number of Xenasmatella species accepted worldwide has reached 25 (Oberwinkler, 1966; Stalpers, 1996; Hjortstam and Ryvarden, 2005; Bernicchia and Gorjón, 2010; Duhem, 2010; Larsson et al., 2020; Maekawa, 2021), of which, nine species have been found in China (Dai et al., 2004; Dai, 2011; Huang et al., 2019; Zong and Zhao, 2021; Zong et al., 2021).

In the present study, we verified the taxonomy and phylogeny of Xenasmataceae. In addition, we analyzed the species diversity of Xenasmataceae and constructed a phylogeny to the order level of this family on the basis of large subunit nuclear ribosomal RNA gene (nLSU) sequences, the internal transcribed spacer (ITS) regions, and ITS+nLSU analyses. Based on both morphology and phylogeny, we propose a new fungal order, Xenasmatales and a new species, Xenasmatella nigroidea. A key to the 25 accepted species of Xenasmatella worldwide is also provided.

The accepted species list

Xenasma Donk (1957).

  • Xenasma Aculeatum C.E. Gómez (1972).

  • Xenasma Amylosporum Parmasto (1968).

  • Xenasma Longicystidiatum Boidin and Gilles (2000).

  • Xenasma Parvisporum Pouzar (1982).

  • Xenasma Praeteritum (H.S. Jacks.) Donk (1957).

  • Xenasma Pruinosum (Pat.) Donk (1957).

  • Xenasma Pulverulentum (H.S. Jacks.) Donk (1957).

  • Xenasma Rimicola (P. Karst.) Donk (1957).

  • Xenasma Subclematidis S.S. Rattan (1977).

  • Xenasma Tulasnelloideum (Höhn. and Litsch.) Donk (1957).

  • Xenasma Vassilievae Parmasto (1965).

Xenasmatella Oberwinkler (1966).

  • Xenasmatella Ailaoshanensis C.L. Zhao ex C.L. Zhao and T.K. Zong (2021).

  • Xenasmatella Alnicola (Bourdot and Galzin) K.H. Larss. and Ryvarden (2020).

  • Xenasmatella Ardosiaca (Bourdot and Galzin) Stalpers (1996).

  • Xenasmatella Athelioidea (N. Maek.) N. Maek. (2021).

  • Xenasmatella Bicornis (Boidin and Gilles) Piatek (2005).

  • Xenasmatella Borealis (K.H. Larss. and Hjortstam) Duhem (2010).

  • Xenasmatella Caricis-Pendulae (P. Roberts) Duhem (2010).

  • Xenasmatella Christiansenii (Parmasto) Stalpers (1996).

  • Xenasmatella Cinnamomea (Burds. and Nakasone) Stalpers (1996).

  • Xenasmatella Fibrillosa (Hallenb.) Stalpers (1996).

  • Xenasmatella Globigera (Hjortstam and Ryvarden) Duhem (2010).

  • Xenasmatella Gossypina (C.L. Zhao) G. Gruhn and Trichies (2021).

  • Xenasmatella Inopinata (H.S. Jacks.) Hjortstam and Ryvarden (1979).

  • Xenasmatella Insperata (H.S. Jacks.) Jülich (1979).

  • Xenasmatella Nasti Boidin and Gilles ex Stalpers (1996).

  • Xenasmatella Odontioidea Ryvarden and Liberta (1978).

  • Xenasmatella Palmicola (Hjortstam and Ryvarden) Duhem (2010).

  • Xenasmatella Rhizomorpha C.L. Zhao (2021).

  • Xenasmatella Romellii Hjortstam (1983).

  • Xenasmatella Sanguinescens Svrček (1973).

  • Xenasmatella Subflavidogrisea (Litsch.) Oberw. ex Jülich (1979).

  • Xenasmatella Tenuis C.L. Zhao (2021).

  • Xenasmatella Vaga (Fr.) Stalpers (1996).

  • Xenasmatella Wuliangshanensis (C.L. Zhao) G. Gruhn and Trichies (2021).

  • Xenasmatella Xinpingensis C.L. Zhao (2021).

Xenosperma Oberw. (1966).

  • Xenosperma Hexagonosporum Boidin and Gilles (1989).

  • Xenosperma Ludibundum (D.P. Rogers and Liberta) Oberw. ex Jülich (1979).

  • Xenosperma Murrillii Gilb. and M. Blackw. (1987).

  • Xenosperma Pravum Boidin and Gilles (1989).

Materials and methods

Sample collection and herbarium specimen preparation

Fresh fruit bodies of fungi growing on the stumps of angiosperms were collected from Honghe, Yunnan Province, P.R. China. The samples were photographed in situ, and macroscopic details were recorded. Field photographs were taken by a Jianeng 80D camera. All photographs were focus stacked and merged using Helicon Focus software. Once the macroscopic details were recorded, the specimens were transported to a field station where they were dried on an electronic food dryer at 45°C. Once dried, the specimens were labeled and sealed in envelopes and plastic bags. The dried specimens were deposited in the herbarium of the Southwest Forestry University (SWFC), Kunming, Yunnan Province, P.R. China.

Morphology

The macromorphological descriptions were based on field notes and photos captured in the field and laboratory. The color, texture, taste, and odor of fruit bodies were mostly based on the authors' field trip investigations. Rayner (1970) and Petersen (1996) were used for the color terms. All materials were examined under a Nikon 80i microscope. Drawings were made with the aid of a drawing tube. The measurements and drawings were made from slide preparations stained with cotton blue (0.1 mg aniline blue dissolved in 60 g pure lactic acid), melzer's reagent (1.5 g potassium iodide, 0.5 g crystalline iodine, 22 g chloral hydrate, and aq. dest. 20 ml), and 5% potassium hydroxide. Spores were measured from the sections of the tubes; and when presenting spore size data, 5% of the measurements excluded from each end of the range are shown in parentheses (Wu et al., 2022). The following abbreviations were used: KOH = 5% potassium hydroxide water solution, CB = cotton clue, CB– = acyanophilous, IKI = Melzer's reagent, IKI– = both inamyloid and indextrinoid, L = means spore length (arithmetic average for all spores), W = means spore width (arithmetic average for all spores), Q = variation in the L/W ratios between the specimens studied, and n = a/b (number of spores (a) measured from given number (b) of specimens).

Molecular phylogeny

The CTAB rapid plant genome extraction kit-DN14 (Aidlab Biotechnologies Co., Ltd., Beijing, P.R. China) was used to obtain genomic DNA from the dried specimens following the manufacturer's instructions (Zhao and Wu, 2017). The nuclear ribosomal ITS region was amplified with the primers ITS5 and ITS4 (White et al., 1990). The nuclear nLSU region was amplified with the primer pairs LR0R and LR7 (http://lutzonilab.org/nuclear-ribosomal-dna/, accessed on September 12, 2021). The PCR procedure used for ITS was as follows: initial denaturation at 95°C for 3 min, followed by 35 cycles at 94°C for 40 s, 58°C for 45 s, and 72°C for 1 min, and a final extension of 72°C for 10 min. The PCR procedure used for nLSU was as follows: initial denaturation at 94°C for 1 min, followed by 35 cycles at 94°C for 30 s, 48°C for 1 min, and 72°C for 1.5 min, and a final extension of 72°C for 10 min. The PCR products were purified and sequenced at Kunming Tsingke Biological Technology Limited Company (Yunnan Province, P.R. China). All the newly generated sequences were deposited in the National Center for Biotechnology Information (NCBI) GenBank (https://www.ncbi.nlm.nih.gov/genbank/, accessed on September 12, 2021) (Table 1).

Table 1

Species NameSpecimen No.GenBank Accession No.References
ITSnLSU
Albatrellus confluensPV 10193AF506393Larsson et al., 2004
Aleurobotrys botryosusCBS 336.66MH858812MH870451Vu et al., 2019
Amaurodon viridisTAA 149664AY463374AY586625Larsson et al., 2004
Amphinema byssoidesEL 1198AY586626Larsson et al., 2004
Amylostereum areolatumNH 8041AF506405Larsson and Larsson, 2003
Aphanobasidium pseudotsugaeNH 10396AY586696Larsson et al., 2004
Auriscalpium vulgareEL 3395AF506375Larsson and Larsson, 2003
Athelia epiphyllaEL 1298AY463382AY586633Larsson et al., 2004
Athelopsis subinconspicuaKHL 8490AY463383AY586634Larsson et al., 2004
Bondarzewia dickinsiiLi 150909/19KX263721KX263723Unpublished
Candelabrochaete septocystidiaAS 95EU118609Larsson, 2007
Chaetodermella lunaNH 8482EU118615Larsson, 2007
C. lunaCBS 305.65MH870216Vu et al., 2019
Chondrostereum purpureumEL 5997AY586644Larsson et al., 2004
Clavulicium delectabileKHL 11147AY586688Larsson et al., 2004
Clavulina cristataEL 9597AY463398AY586648Larsson et al., 2004
Columnocystis abietinaKHL 12474EU118619Larsson, 2007
Coronicium alboglaucumNH 4208AY586650Larsson et al., 2004
Cystostereum murrayiKHL 12496EU118623Larsson, 2007
Dacrymyces stillatusCBS 195.48MH856306MH867857Vu et al., 2019
Dacryopinax spathulariaMiettinen 20559MW191976MW159092Unpublished
Erythricium laetumNH 14530AY463407AY586655Larsson et al., 2004
Exidia recisaSL Lindberg 180317MT664783Unpublished
Exidiopsis calceaKHL 11075AY586654Larsson et al., 2004
Gloeocystidiellum porosumFCUG 1933AF310094Larsson and Hallenberg, 2001
Haplotrichum conspersumKHL 11063AY463409AY586657Larsson et al., 2004
Hydnocristella himantiaKUC 20131001-35KJ668382Unpublished
Hydnomerulius pinastri412AF352044Jarosch and Besl, 2001
Hydnum repandum420526MF0827MG712372Unpublished
Hygrophoropsis aurantiacaEL 4299AY586659Larsson et al., 2004
Hymenochaete cinnamomeaEL 699AY463416AY586664Larsson et al., 2004
Hyphodermella corrugateKHL 3663EU118630Larsson, 2007
Hyphodontia asperaKHL 8530AY463427AY586675Larsson et al., 2004
Inonotus radiatusTW 704AF311018Wagner and Fischer, 2001
Junghuhnia nitidaCBS 45950MH868226Vu et al., 2019
Kavinia alboviridisEL 1698AY463434Larsson et al., 2004
Kavinia himantiaLL 98AY463435AY586682Larsson et al., 2004
Lactarius volemusKHL 8267AF506414Larsson and Larsson, 2003
Laetisaria fuciformisCBS 18249MH868023Vu et al., 2019
Lentaria dendroideaSJ 98012EU118640EU118641Larsson, 2007
Lignosus hainanensisDai 10670NR154112GU580886Cui et al., 2011
Merulicium fusisporumHjm s.n.EU118647Larsson, 2007
Mycoaciella bisporaEL 1399AY586692Larsson et al., 2004
Peniophora piniHjm 18143EU118651Larsson, 2007
Phanerochaete sordidaKHL 12054EU118653Larsson, 2007
Phellinus chrysolomaTN 4008AF311026Wagner and Fischer, 2001
Phlebia nitidulaNystroem 020830EU118655Larsson, 2007
Podoscypha multizonataCBS 66384MH873501Vu et al., 2019
Polyporus tubiformisWD 1839AB587634AB368101Sotome et al., 2011
Porpomyces mucidusKHL 11062AF347091Unpublished
P. mucidusDai 10726KT157839Wu et al., 2015
Pseudomerulius aureusBN 99AY586701Larsson et al., 2004
Punctularia strigosozonataLR 40885AY463456AY586702Larsson et al., 2004
Rickenella fibulaAD 86033AY586710Larsson et al., 2004
Russula violaceaSJ 93009AF506465AF506465Larsson and Larsson, 2003
Scopuloides hydnoidesWEI 17569MZ637283Chen et al., 2021
Sistotrema alboluteumTAA 167982AY463467AY586713Larsson et al., 2004
Sistotremastrum niveocremeumMAFungi 12915JX310442Telleria et al., 2013
Sistotremastrum suecicumKHL 11849EU118667Larsson, 2007
Sphaerobasidium minutumKHL 11714DQ873653Larsson et al., 2006
Stereum hirsutumNH 7960AF506479Larsson and Larsson, 2003
Tomentellopsis echinosporaKHL 8459AY463472AY586718Larsson et al., 2004
Trametes suaveolensCBS 279.28MH855012MH866480Vu et al., 2019
Trechispora farinaceaKHL 8793AF347089Larsson et al., 2004
T. farinaceaMAFungi 79474JX392856Telleria et al., 2013
Tubulicrinis subulatusKHL 11079AY463478AY586722Larsson et al., 2004
Veluticeps abietinaHHB 13663KJ141191Unpublished
Veluticeps berkeleyiHHB 8594HM536081Garcia-Sandoval et al., 2010
Vuilleminia comedensEL 199AY463482AY586725Larsson et al., 2004
Wrightoporia lentaKN 150311AF506489Larsson and Larsson, 2003
Xerocomus chrysenteronEL 3999AF347103Larsson et al., 2004
Xenasma praeteritumACD 0185OM009268Unpublished
Xenasma pruinosumOTU 1299MT594801Unpublished
Xenasma rimicolaNLB 1571MT571671Unpublished
X. rimicolaNLB 1449MT537020Unpublished
Xenasmatella ailaoshanensisCLZhao 3895MN487105Huang et al., 2019
X. ailaoshanensisCLZhao 4839MN487106Huang et al., 2019
Xenasmatella ardosiacaCBS 126045MH864060MH875515Vu et al., 2019
Xenasmatella borealisUC 2022974KP814210Rosenthal et al., 2017
X. borealisUC 2023132KP814274Rosenthal et al., 2017
Xenasmatella christianseniiTASM YGG 26MT526341Gafforov et al., 2020
X. christianseniiTASM YGG 36MT526342Gafforov et al., 2020
Xenasmatella gossypinaCLZhao 4149MW545958Zong and Zhao, 2021
X. gossypinaCLZhao 8233MW545957Zong and Zhao, 2021
Xenasmatella nigroideaCLZhao 18300OK045679OK045677Present study
X. nigroideaCLZhao 18333 *OK045680OK045678Present study
Xenasmatella rhizomorphaCLZhao 9156MT832954Zong et al., 2021
X. rhizomorphaCLZhao 9847MT832953Zong et al., 2021
Xenasmatella tenuisCLZhao 4528MT832960Zong et al., 2021
X. tenuisCLZhao 11258MT832959Zong et al., 2021
Xenasmatella vagaKHL 11065EU118660EU118661Larsson, 2007
X. vagaBHI-F 160aMF161185Haelewaters et al., 2018
Xenasmatella wuliangshanensisCLZhao 4080MW545962Zong and Zhao, 2021
X. wuliangshanensisCLZhao 4308MW545963Zong and Zhao, 2021
Xenasmatella xinpingensisCLZhao 2216MT832961Zong et al., 2021
X. xinpingensisCLZhao 2467MT832962Zong et al., 2021

The list of species, specimens, and GenBank accession numbers of sequences used in this study.

*

Indicates type materials.

The sequences and alignment were adjusted manually using AliView version 1.27 (Larsson, 2014). The datasets were aligned with Mesquite version 3.51. The ITS+nLSU dataset and the nLSU-only sequence dataset were used to position a new order, Xenasmatales, and the ITS-only dataset was used to position a new species among the Xenasmatella-related taxa. Sequences of Dacrymyces stillatus and Dacryopinax spathularia retrieved from GenBank were used as the outgroup for the ITS+nLSU sequences (Figure 1) (He et al., 2019); sequences of Exidia recisa and Exidiopsis calcea retrieved from GenBank were used as the outgroup for the nLSU sequences (Figure 2) (Larsson, 2007); and the sequence of Trametes suaveolens was used as the outgroup for the ITS-only sequences (Figure 3) (Zong and Zhao, 2021).

Figure 1

Figure 1

A maximum parsimony strict consensus tree illustrating the phylogeny of the new order Xenasmatales and related order in the class Agaricomycetes based on ITS+nLSU sequences. The orders represented by each color are indicated in the upper left of the phylogenetic tree. Branches are labeled with a maximum likelihood bootstrap value ≥ 70%, and a parsimony bootstrap value ≥ 50, respectively.

Figure 2

Figure 2

A maximum parsimony strict consensus tree illustrating the phylogeny of the new order Xenasmatales and related order in the class Agaricomycetes based on nLSU sequences. The orders represented by each color are indicated in the upper left of the phylogenetic tree. Branches are labeled with a maximum likelihood bootstrap value ≥ 70%, a parsimony bootstrap value ≥ 50%, and Bayesian posterior probabilities ≥ 0.95, respectively.

Figure 3

Figure 3

A maximum parsimony strict consensus tree illustrating the phylogeny of a new species and related species in Xenasmatella and Xenasma based on ITS sequences. Branches are labeled with a maximum likelihood bootstrap value ≥ 70%, a parsimony bootstrap value ≥ 50%, and Bayesian posterior probabilities ≥ 0.95, respectively. The new species are in bold.

The three combined datasets were analyzed using maximum parsimony (MP), maximum likelihood (ML), and Bayesian inference (BI), according to Zhao and Wu (2017), and the tree was constructed using PAUP* version 4.0b10 (Swofford, 2002). All characters were equally weighted and gaps were treated as missing data. Trees were inferred using the heuristic search option with TBR branch swapping and 1,000 random sequence additions. Max-trees were set to 5,000, branches of zero length were collapsed, and all parsimonious trees were saved. Clade robustness was assessed using the bootstrap (BT) analysis with 1,000 replicates (Felsenstein, 1985). Descriptive tree statistics—tree length (TL), consistency index (CI), retention index (RI), rescaled consistency index (RC), and homoplasy index (HI)—were calculated for each maximum parsimonious tree generated. In addition, multiple sequence alignment was analyzed using ML in RAxML-HPC2 through the Cipres Science Gateway (Miller et al., 2012). Branch support (BS) for ML analysis was determined by 1,000 bootstrap replicates.

MrModeltest 2.3 (Nylander, 2004) was used to determine the best-fit evolution model for each dataset of BI, which was performed using MrBayes 3.2.7a with a GTR+I+G model of DNA substitution and a gamma distribution rate variation across sites (Ronquist et al., 2012). A total of 4 Markov chains were run for 2 runs from random starting trees for 1 million generations for the ITS+nLSU dataset (Figure 1), 1.4 million generations for the nLSU-only sequences (Figure 2), and 0.5 million generations for the ITS-only sequences (Figure 3), with trees and parameters sampled every 1,000 generations. The first one-fourth of all generations was discarded as a burn-in. The majority rule consensus tree of all remaining trees was calculated. Branches were considered significantly supported if they received a maximum likelihood bootstrap value (BS) ≥70%, a maximum parsimony bootstrap value (BT) ≥70%, or Bayesian posterior probabilities (BPP) ≥0.95.

Results

Phylogenetic analyses

The ITS+nLSU dataset (Figure 1) included sequences from 45 fungal specimens representing 45 species. The dataset had an aligned length of 3,095 characters, of which 1,910 characters are constant, 353 are variable and parsimony uninformative, and 832 are parsimony informative. Maximum parsimony analysis yielded 45 equally parsimonious trees (TL = 3,984, CI = 0.4666, HI = 0.5334, RI = 0.3909, and RC = 0.1824). The best model was GTR+I+G [lset nst = 6, rates = invgamma; prset statefreqpr = dirichlet (1,1,1,1)]. Bayesian and ML analyses showed a topology similar to that of MP analysis with split frequencies equal to 0.009126 (BI), and the effective sample size (ESS) across the two runs is double that of the average ESS (avg ESS) = 250.5.

The ITS+nLSU rDNA gene regions (Figure 1) were based on 13 orders, namely, Agaricales Underw., Atheliales Jülich, Boletales E.J. Gilbert, Cantharellales Gäum., Corticiales K.H. Larss., Gloeophyllales Thorn, Gomphales Jülich, Hymenochaetales Oberw., Polyporales, Russulales, Thelephorales Corner ex Oberw., Trechisporales, and Xenasmatales, while Xenasmatella was separated from the other orders.

The nLSU-alone dataset (Figure 2) included sequences from 58 fungal specimens representing 58 species. The dataset had an aligned length of 1,343 characters, of which 726 characters are constant, 176 are variable and parsimony-uninformative, and 441 are parsimony-informative. Maximum parsimony analysis yielded 3 equally parsimonious trees (TL = 2,864, CI = 0.3209, HI = 0.6791, RI = 0.4476, and RC = 0.1436). The best model for the ITS dataset estimated and applied in the Bayesian analysis was GTR+I+G [lset nst = 6, rates = invgamma; prset statefreqpr = dirichlet (1,1,1,1)]. The Bayesian and ML analyses resulted in a topology similar to that of MP analysis with split frequencies equal to 0.009830 (BI), and the effective sample size (ESS) across the two runs is double that of the average ESS (avg ESS) = 402.

The nLSU regions (Figure 2) were based on 13 orders, namely, Agaricales, Atheliales, Boletales, Cantharellales, Corticiales, Gloeophyllales, Gomphales, Hymenochaetales, Polyporales, Russulales, Thelephorales, Trechisporales, and Xenasmatales, while Xenasmatella was separated from the other orders.

The ITS-alone dataset (Figure 3) included sequences from 26 fungal specimens representing 15 species belonging to Xenasma and Xenasmatella. The dataset had an aligned length of 598 characters, of which 267 characters are constant, 74 are variable and parsimony-uninformative, and 257 are parsimony-informative. Maximum parsimony analysis yielded 1 equally parsimonious tree (TL = 629, CI = 0.7329, HI = 0.2671, RI = 0.8301, and RC = 0.6084). The best model for the ITS dataset estimated and applied in the Bayesian analysis was GTR+I+G [lset nst = 6, rates = invgamma; prset statefreqpr = dirichlet (1,1,1,1)]. The Bayesian and ML analyses resulted in a topology similar to MP analysis with split frequencies equal to 0.007632 (BI), and the effective sample size (ESS) across the two runs is double that of the average ESS (avg ESS) = 300.5.

In the ITS sequence analysis (Figure 3), a previously undescribed species was grouped into Xenasmatella with a sister group to X. vaga (Fr.) Stalpers.

Taxonomy

  • Xenasmatales K.Y. Luo and C.L. Zhao, ord. nov.

  • MycoBank no.: MB 842882

  • Type family: Xenasmataceae Oberw.

Basidiomata resupinate. Hyphal systems are monomitic, generative hyphae with clamp connections. Basidia pleural. Basidiospores are colorless.

  • Xenasmataceae Oberw., Sydowia 19(1–6): 25 (1966).

  • MycoBank no.: MB 81527

  • Type genus: Xenasma Donk

Basidiomata resupinate, ceraceous to geletinous. Hyphal systems are monomitic, generative hyphae with clamp connections. Basidia pleural usually with 4 sterigmata and a basal clamp connection. Basidiospores are colorless.

  • Xenasma Donk, Fungus, Wageningen 27: 25 (1957).

  • MycoBank no.: MB 18755

  • Type species: Xenasma rimicola (P. Karst.) Donk.

Basidiomata resupinate, adnate, are ceraceous to gelatinous when fresh, membranaceous when dry, and have a hymenophore smooth. Hyphal system are monomitic, generative hyphae with clamp connections. Cystidia and cystidioles are present. Basidia are cylindrical to subclavate, pleural, usually with 4 sterigmata and a basal clamp connection. Basidiospores are globose to cylindrical, colorless, thin-walled, warted to striate, non-amyloid, and weakly dextrinoid.

  • Xenosperma Oberw., Sydowia 19(1–6): 45 (1966).

  • MycoBank no.: MB 18759

  • Type species: Xenosperma ludibundum (D.P. Rogers and Liberta) Oberw.

Basidiomata resupinate, closely adnate to the substratum, are gelatinous when fresh and pruinose when dry. Hyphal systems are monomitic, generative hyphae with clamp connections. Cystidia are absent. Basidia pleural, usually with 2–4 sterigmata and a basal clamp connection. Basidiospores are angular, colorless, thin-walled, tetrahedral, with some protuberances, IKI–, and CB–.

  • Xenasmatella Oberw., Sydowia 19(1–6): 28 (1966).

  • MycoBank no.: MB 18756

  • Type species: Xenasmatella subflavidogrisea (Litsch.) Oberw. ex Jülich.

Basidiomata resupinate with a gelatinous. Hyphal system with clamped generative hyphae. Cystidia are absent. Basidia pleural, usually with 4 sterigmata and a basal clamp connection. Basidiospores are hyaline, thin-walled, warted, IKI–, and CB–.

  • Xenasmatella nigroidea K.Y. Luo and C.L. Zhao, sp. nov.

  • MycoBank no.: MB 842470, Figures 4, 5.

Figure 4

Figure 4

Basidiomata of Xenasmatella nigroidea (holotype). Bars: (A) 1 cm; (B) 1 mm.

Figure 5

Figure 5

Microscopic structures of Xenasmatella nigroidea (drawn from the holotype). (A) Basidiospores. (B) Basidia and basidioles. (C) A section of hymenium. Bars: (A) 5 μm; (B,C) 10 μm.

Holotype—China. Yunnan Province, Honghe, Pingbian County, Daweishan National Nature Reserve, GPS coordinates 23°42′ N, 103°32′ E, altitude 1,500 m asl., on angiosperm stump, leg. C.L. Zhao, August 3, 2019, CLZhao 18333 (SWFC).

Etymology—nigroidea (Lat.): refers to the black hymenial surface.

Basidiomata: Basidiomata are annuals, resupinate, thin, very hard to separate from substrate, odorless or tasteless when fresh, grayish when fresh, gray to black and brittle when dry, up to 7.5 cm long, 3.5 cm wide, 70–150 μm thick. Hymenial is surface smooth, and byssaceous to reticulate under the lens. Sterile margin indistinct, black, up to 1 mm wide.

Hyphal system: monomitic, generative hyphae with clamp connections, thick-walled, unbranched, 2.5–4 μm in diameter, IKI–, CB–, and tissues unchanged in KOH.

Hymenium: cystidia and cystidioles are absent; basidia are pleural, clavate, with 4 sterigmata and a basal clamp connection, 12.0–18.0 × 4.5–6 μm; basidioles are shaped similar to basidia but slightly smaller.

Basidiospores: ellipsoid, colorless, thin-walled, warted throughout, asperulate with blunt spines up to 0.2 μm long, with one oil drop inside, IKI–, CB–, 3.5–4.5 × 2.5–3.5 μm, L = 4.07 μm, W = 2.87 μm, Q = 1.38–1.45 (n = 60/2).

Type of rot: White rot.

Additional specimen examined: CHINA, Yunnan Province, Honghe, Pingbian County, Daweishan National Nature Reserve, GPS coordinates 23°40′ N, 103°31′ E, altitude 1,500 m asl., on the angiosperm stump, leg. C.L. Zhao, August 3, 2019, CLZhao 18300 (SWFC).

Discussion

There have been debates among mycologists regarding the order level taxonomic status of the Xenasmataceae. Corticioid homobasidiomycetes have a high phylogenetic diversity. Thus, an accurate place for the taxa of Xenasmataceae has not been decided. However, it was only assigned to euagarics clade (Larsson et al., 2004). Later, the Phlebiella family was proposed by Larsson (2007) on the basis of corticioid fungi; however, this group was not placed under any order. Recently, Xenasmataceae was placed under Russulales by He et al. (2019). Zong et al. (2021) studied the specimens and sequences from China and treated this group as Xenasmatella as the phylogenetic datasets showed that this clade does not belong to any order. In the present study (Figure 1), the ITS+nLSU analyses of 13 orders, namely, Agaricales, Atheliales, Boletales, Cantharellales, Corticiales, Gloeophyllales, Gomphales, Hymenochaetales, Polyporales, Russulales, Thelephorales, Trechisporales, and Xenasmatales showed that the taxa of Xenasmataceae form a single lineage with the sequences of Hymenochaetales and Atheliales; and this is similar to the results of Larsson (2007). In the present study (Figure 2), the nLSU analysis showed that the taxa of Xenasmataceae form a single lineage with the sequences of Hymenochaetales and Boletales; and this is similar to the results of Larsson (2007). In the present study (Table 2), we have enumerated morphological differences among the related orders. Therefore, a new fungal order, Xenasmatales, is proposed on the basis of morphological and molecular identification.

Table 2

Order NameMorphological characteristicsReferences
AgaricalesHymenophore type gilled, poroid, ridged, veined, spinose, papillate, and smooth; spore deposit color white, pink, brown, purple-brown and blackFries, 1821–1832, 1828, 1857–1863, 1874
AthelialesGenerally corticioid and athelioid, producing effused, crust like fruiting bodies that are loosely attached to the substrate and with non-differentiated marginsEriksson et al., 1978, 1981, 1984
BoletalesIncludes conspicuous stipitate-pileate forms that mainly have tubular and sometimes lamellate hymenophores or intermediates that show transitions between the two types of hymenophores. Also includes gasteromycetes (puffball-like forms), resupinate or crust-like fungi that produce smooth, merulioid (wrinkled to warted), or hydnoid (toothed) hymenophores, and a single polypore-like species, Bondarcevomyces taxiGilbert, 1931; Besl and Bresinsky, 1997; Jarosch, 2001; Larsson et al., 2004
CorticialesBasidiomata resupinata, effuso-reflexa vel discoidea; hymenophora laevia; systema hypharum monomiticum; dendrohyphidia raro absentia; basidia saepe e probasidiis oriuntur. Cystidia presentia vel absentia. Sporae hyalinae, tenuitunicatae, albae vel aggregatae roseae.Hibbett et al., 2007
GloeophyllalesBasidiomata annua vel perennia, resupinata, effuso-reflexa, dimidiata vel pileata; hymenophora laevia, merulioidea, odontioidea vel poroidea. Systema hypharum monomiticum, dimiticum vel trimiticum. Hyphae generativae fibulatae vel efibulatae. Leptocystidia ex trama in hymenium projecta, hyalina vel brunnea, tenuitunicata vel crassitunicata. Basidiosporae laeves, hyalinae, tenuitunicatae, ellipsoideae vel cylindricae vel allantoideae, inamyloideae. Lignum decompositum brunneum vel album.Hibbett et al., 2007
GomphalesBasidiomata can be coralloid, unipileate or merismatoid (having a pileus divided into many smaller pilei); the pileus, if present, can be fan- to funnel-shapedGonzalez-Avila et al., 2017
HymenochaetalesHymenial structure (corticioid, hydnoid or poroid) and basidiocarps (resupinate, pileate or stipitate); the main characters are the xanthochroic reaction, the lack of clamps, the frequent occurrence of setaeTobias and Michael, 2002
ThelephoralesBasidiospores tuberosae spinosaeque plus minusve colorataeOberwinkler, 1975
TrechisporalesBasidiomata resupinata, stipitata vel clavarioidea. Hymenophora laevia, grandinioidea, hydnoidea vel poroidea. Systema hypharum monomiticum vel dimiticum. Hyphae fibulatae, septa hypharum interdum inflata (ampullata). Cystidia praesentia vel absentia. Basidia 4-6 sterigmata formantia. Sporae laeves vel ornatae. Species lignicolae vel terricolae.Hibbett et al., 2007
XenasmatalesBasidiomata resupinate. Hyphal system monomitic, generative hyphae with clamp connections. Basidia pleural. Basidiospores colorless.Present study

Morphological characteristics of the relevant orders used in this study.

Phlebiella was not deemed to be a legitimately published genus (Duhem, 2010), and transferring to Xenasmatella was proposed. Later, Larsson et al. (2020) studied corticioid fungi (Basidiomycota and Agaricomycetes) and agreed with Duhem (2010), who suggested accepting the genus Xenasmatella. Recently, several mycologists have suggested the replacement of the invalid genus Phlebiella with Xenasmatella on the basis of morphology and molecular analyses (Maekawa, 2021; Zong et al., 2021).

On the basis of ITS dataset, a previous study showed that nine species of Xenasmatella have been reported, of which 6 new species were found in China, namely, X. ailaoshanensis C.L. Zhao ex C.L. Zhao and T.K. Zong, X. gossypina, X. rhizomorpha, X. tenuis, X. wuliangshanensis, and X. xinpingensis. According to our sequence data, Xenasmatella nigroidea was nested into Xenasmatella with strong statistical support (Figure 3), and formed a sister group with X. vaga. However, X. nigroidea is morphologically distinguished from X. vaga by larger basidiospores (5–5.5 × 4–4.5 μm). In addition, it turns dark red or purplish with KOH (Bernicchia and Gorjón, 2010).

Morphological comparisons of Xenasmatella nigroidea and other species are included in Table 3. Xenasmatella nigroidea is similar to X. christiansenii (Parmasto) Stalpers, X. fibrillosa (Hallenb.) Stalpers, X. gossypina, and X. rhizomorpha C.L. Zhao by having gossypine, byssaceous to reticulate hymenial surface, however, X. christiansenii is distinguished from X. nigroidea by its larger basidiospores (6–7 × 4–4.5 μm) and asperulate with blunt spines (up to 1 μm long; Bernicchia and Gorjón, 2010). Xenasmatella fibrillosa differs from X. nigroidea due to the presence of a white to pale yellowish white hymenial surface and longer basidiospores (4.5–5.5 μm; Bernicchia and Gorjón, 2010). Xenasmatella gossypina can be distinguished from X. nigroidea because it has cotton to flocculent basidiomata with a cream to buff hymenial surface and subglobose to globose basidiospores (Zong and Zhao, 2021). Xenasmatella rhizomorpha is separated from X. nigroidea by the clay-buff to cinnamon hymenial surface and the presence of the rhizomorphs (Zong et al., 2021).

Table 3

Species nameBasidiomataHymenial surfaceBasidiaBasidiosporesReferences
Xenasmatella nigroideaThin, very hard to separate from substrateSmooth, byssaceous to reticulate under the lens12–18 × 4.5–6 μmEllipsoid, 3.5–4.5 × 2.5–3.5 μm; asperulate with blunt spines up to 0.2 μm longPresent study
X. christianseniiFragileSmooth, pruinose to farinaceous or more or less reticulate6–7 × 4–4.5 μmEllipsoid, 6–7 × 4–4.5 μm; asperulate with blunt spines up to 1 μm longBernicchia and Gorjón, 2010
X. fibrillosaThin, fragilePorulose to reticulate or formed by radially arranged, white to pale yellowish white12–15 × 4–5 μmEllipsoid, 4.5–5.5 × 3–3.5 μmBernicchia and Gorjón, 2010
X. gaspesicaSmall spots and becoming a closed coating, firmly attachedResh smooth and somewhat gelatinous, light gray, dry waxy, white gray7–11 × 4–4.5 μmEllipsoid, 8–10 × 2–2.5 μmGrosse-Brauckmann and Kummer, 2004
X. gossypinaCotton to flocculentCream to buff14–23.5 × 4–7 μmSubglobose to globose, 3.3–4.4 × 2.8–4 μmZong and Zhao, 2021
X. odontioideaColliculosaCeraceo-membranacea17.5–20 × 4.5–5 μmOvale-ellipsoid, 2.5–3.5 μmRyvarden and Liberta, 1978
X. rhizomorphaPresence of the rhizomorphClay-buff to cinnamon10.5–17.5 × 3.5–6.5 μmEllipsoid, 3.1–4.9 × 2.3–3.3 μmZong et al., 2021
X. subflavidogriseaThinWhite to grayish10–12 × 4–5 μmEllipsoid, 3.5–4.5 × 2–2.5 μmBernicchia and Gorjón, 2010
X. vagaDetachableGrandinioid15–20 × 5–6 μmEllipsoid, 5–5.5 × 4–4.5 μmBernicchia and Gorjón, 2010

Morphological characteristic comparison of Xenasmatella nigroidea and other species.

Xenasmatella nigroidea is similar to X. gaspesica (Liberta) Hjortstam, X. odontioidea Ryvarden & Liberta, X. subflavidogrisea (Litsch.) Oberw. ex Jülich, and X. vaga (Fr.) Stalpers due to the presence of the ellipsoid or narrowly ellipsoid basidiospores. However, X. gaspesica differs from X. nigroidea because it has smaller basidia (7–11 × 4–4.5 μm) and larger basidiospores (8–10 × 2–2.5 μm; Grosse-Brauckmann and Kummer, 2004). Xenasmatella odontioidea can be distinguished from X. nigroidea by its colliculosa hymenial surface and shorter basidiospores (2.5–3.5 μm; Ryvarden and Liberta, 1978). Xenasmatella subflavidogrisea is separated from X. nigroidea due to the presence of a white to grayish hymenial surface, turning dark reddish brown in KOH and narrower basidiospores (2–2.5 μm; Bernicchia and Gorjón, 2010). Xenasmatella vaga differs from X. nigroidea due to its grandinioid hymenial surface and larger basidiospores (5–5.5 × 4–4.5 μm; Bernicchia and Gorjón, 2010).

Based on the geographical distribution in America, Asia, and Europe, and ecological habits, white-rot causing Xenasmataceae have been reported in angiosperms and gymnosperms (Figure 6 and Table 4) (Stalpers, 1996; Dai et al., 2004; Hjortstam and Ryvarden, 2005; Bernicchia and Gorjón, 2010; Duhem, 2010; Dai, 2011; Huang et al., 2019; Larsson et al., 2020; Maekawa, 2021; Zong and Zhao, 2021; Zong et al., 2021). Key to 25 accepted species of Xenasmatella worldwide in Table 5. Many wood-decaying fungi have been recently reported worldwide (Zhu et al., 2019; Angelini et al., 2020; Gafforov et al., 2020; Zhao and Zhao, 2021). According to the results of our study on Xenasmatella, all these fungi can be classified into a new taxon (Figure 3). In addition, this study contributes to the knowledge of the fungal diversity in Asia.

Figure 6

Figure 6

The geographic distribution of Xenasmataceae species (holotype) worldwide.

Table 4

Species nameGeographic distributionHost-substratumReferences
Xenasma aculeatumArgentinaOn fructifications of HypoxylonGómez, 1972
X. amylosporumPrimoryeOn rotten trunk of Picea jezoensisParmasto, 1968
X. longicystidiatumRéunionOn Rubus alcaefoliusBoidin and Gilles, 2000
X. parvisporumCzech RepublicOn fallen branch of Quercus petraeaPouzar, 1982
X. praeteritumOntarioOn woodDonk, 1957
X. pruinosumTunisiaOn oak tree, bared and rottenDonk, 1957
X. pulverulentumAustriaOn rotten woodDonk, 1957
X. rimicolaFinlandOn cracks in barkDonk, 1957
X. subclematidisJammu-KashmirOn logRattan, 1977
X. tulasnelloideumAmericaOn very rotten woodHöhnel and Litschauer, 1908
X. vassilievaeKhabarovskOn fallen trunk of Taxus cuspidataParmasto, 1965
Xenasmatella ailaoshanensisYunnanOn trunk of AngiospermaeHuang et al., 2019
X. alnicolaAllierSur bois humides, aune, saule blaneBourdot and Galzin, 1928
X. ardosiacaFranceOn decayed woodBourdot and Galzin, 1928
X. athelioideaJapanOn rotten trunk of QuercusMaekawa, 2021
X. bicornisGabonAmong shrubs on shoreBoidin and Gilles, 2004
X. borealisNorwayOn rotten Pinus sylvestrisHjortstam and Larsson, 1987
X. caricis-pendulaeGreat BritainOn dead attached leaf of Carex pendulaRoberts, 2007
X. christianseniiKamchatkaOn fallen branch of Larix kurilensis var. glabraParmasto, 1965
X. cinnamomeaFloridaOn MagnoliaBurdsall and Nakasone, 1981
X. fibrillosaIranOn decayed woodHallenberg, 1978
X. globigeraVenezuelaOn hardwoodHjortstam and Ryvarden, 2005
X. gossypinaYunnanOn trunk of AngiospermaeZong and Zhao, 2021
X. inopinataOntarioOn Tsuga canadensisJackson, 1950
X. insperataOntarioOn barkJackson, 1950
X. nastiReunionUnder Nastus borbonicusStalpers, 1996
X. odontioideaCanaryOn decayed woodRyvarden and Liberta, 1978
X. palmicolaVenezuelaOn palmHjortstam and Ryvarden, 2007
X. rhizomorphaYunnanOn trunk of AngiospermaeZong et al., 2021
X. romelliiSwedenOn deciduous woodHjortstam, 1983
X. sanguinescensCzech RepublicOn decayed woodSvrcek, 1973
X. subflavidogriseaSwedenOn rotten wood of Pinus sylvestrisJülich, 1979
X. tenuisYunnanOn trunk of AngiospermaeZong et al., 2021
X. vagaItalyOn Robinia pseudoacaciaStalpers, 1996
X. wuliangshanensisYunnanOn trunk of AngiospermaeZong and Zhao, 2021
X. xinpingensisYunnanOn trunk of AngiospermaeZong et al., 2021
Xenosperma hexagonosporumFranceOn wood of Platanus acerifoliaBoidin and Gilles, 1989
X. ludibundumMassachusettsOn bark of Quercus and decayed wood of Chamaecyparis thyoidesJülich, 1979
X. murrilliiFloridaOn branch of Juniperus virginianaGilbertson and Blackwell, 1987
X. pravumRéunionOn dead branchBoidin and Gilles, 1989

The geographic distribution and host-substratum of Xenasmataceae species (holotype).

Table 5

1. Gloeocystidia presentX. inopinata
1. Cystidia absent2
2. Basidia with 2, 3 sterigmataX. bicornis
2. Basidia with 4 sterigmata3
3. Basidia sterigmata > 5 μm in lengthX. nasti
3. Basidia sterigmata < 5 μm in length4
4. Basidiospores > 5 μm in length5
4. Basidiospores < 5 μm in length12
5. Basidiospores > 4 μm in width6
5. Basidiospores < 4 μm in width9
6. Basidiospores globoseX. ardosiaca
6. Basidiospores ellipsoid7
7. Basidia < 6 μm in widthX. vaga
7. Basidia > 6 μm in width8
8. Growth on dead angiospermX. caricis-pendulae
8. Growth on the trunk of gymnospermX. christiansenii
9. Basidiospores < 2 μm in widthX. athelioidea
9. Basidiospores > 2 μm in width10
10. Hymenial margin with fimbriaeX. romellii
10. Hymenial margin without fimbriae11
11. Hymenial surface arachnoid or byssoidX. borealis
11. Hymenial surface smoothX. insperata
12. Basidiospores subglobose to globose13
12. Basidiospores ellipsoid to subcylindrical17
13. Basidiospores thick-walledX. globigera
13. Basidiospores thin-walled14
14. Hymenial surface clay-pink to saffronX. wuliangshanensis
14. Hymenial surface white to grayish or cream to buff15
15. Generative hyphae thick-walled, unbranchedX. xinpingensis
15. Generative hyphae thin-walled, branched16
16. Hymenial surface gossypine to byssaceousX. gossypina
16. Hymenial surface pruinose to farinaceousX. ailaoshanensis
17. Generative hyphae thick-walled18
17. Generative hyphae thin-walled19
18. Hymenial surface gray to blackX. nigroidea
18. Hymenial surface clay-buff to cinnamonX. rhizomorpha
19. Growth on palmX. palmicola
19. Growth on other plant20
20. Growth on the bark of magnoliaX. cinnamomea
20. Growth on other wood21
21. Basidiospores slightly thick-walledX. alnicola
21. Basidiospores thin-walled22
22. Basidia barrel-shapedX. tenuis
22. Basidia cylindrical23
23. Basidiomata ochreousX. odontioidea
23. Basidiomata white to gray24
24. Basidiospores > 3 μm in widthX. fibrillosa
24. Basidiospores < 3 μm in widthX. subflavidogrisea

Key to 25 accepted species of Xenasmatella worldwide.

Funding

The research was supported by the National Natural Science Foundation of China (Project No. 32170004, U2102220) to C-LZ, the Yunnan Fundamental Research Project (Grant No. 202001AS070043) to C-LZ, the High-level Talents Program of Yunnan Province (YNQR-QNRC-2018-111) to C-LZ, and the Yunnan Key Laboratory of Plateau Wetland Conservation, Restoration, and Ecological Services (202105AG070002) to K-YL.

Publisher's note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

Statements

Data availability statement

The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/supplementary material.

Author contributions

C-LZ: conceptualization, resources, supervision, project administration, and funding acquisition. C-LZ and K-YL: methodology, software, validation, formal analysis, investigation, writing—original draft preparation, writing—review and editing, and visualization. Both authors have read and agreed to the published version of the manuscript.

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

References

  • 1

    AngeliniC.VizziniA.JustoA.BizziA.KayaE. (2020). First report of a neotropical agaric (lepiota spiculata, agaricales, basidiomycota) containing lethal α-amanitin at toxicologically relevant levels. Front. Microbiol.11, 1833. 10.3389/fmicb.2020.01833

  • 2

    BernicchiaA.GorjónS. P. (2010). Fungi Europaei 12: Corticiaceae s.l.Alassio: Edizioni Candusso.

  • 3

    BeslH.BresinskyA. (1997). Chemosystematics of suillaceae and gomphidiaceae (suborder Suillineae). Plant Syst. Evol.206, 223242. 10.1007/BF00987949

  • 4

    BoidinJ.GillesG. (1989). Les Corticiés pleurobasidiés (Basidiomycotina) en France. Cryptogamic Bot.1, 7079.

  • 5

    BoidinJ.GillesG. (2000). Basidiomycètes Aphyllophorales de l'ile de La Reunion. XXI - Suite. Mycotaxon75, 357387.

  • 6

    BoidinJ.GillesG. (2004). Homobasidiomycètes Aphyllophorales non porés à basides dominantes à 2 (3) stérigmates. Bull. Trimest. Soc. Mycol. Fr.119, 117.

  • 7

    BourdotH.GalzinA. (1928). Hyménomycètes de France : Hétérobasidiés. Homobasidiés gymnocarpes / par MM. l'abbé H. Bourdot et A. Galzin.Paris: Bibliothèque nationale de France, département Sciences et techniques, 786.

  • 8

    BurdsallH. H.NakasoneK. K. (1981). New or little known lignicolous aphyllophorales (Basidiomycotina) from southeastern United States. Mycologia73, 454476. 10.1080/00275514.1981.12021368

  • 9

    ChenC. C.ChenC. Y.WuS. H. (2021). Species diversity, taxonomy and multi-gene phylogeny of phlebioid clade (Phanerochaetaceae, Irpicaceae, Meruliaceae) of polyporales. Fungal Divers.111, 1106. 10.1007/s13225-021-00490-w

  • 10

    CuiB. K.DuP.DaiY. C. (2011). Three new species of Inonotus (Basidiomycota, Hymenochaetaceae) from China. Mycol. Prog.10, 107114. 10.1007/s11557-010-0681-6

  • 11

    DaiY. C. (2011). A revised checklist of corticioid and hydnoid fungi in China for 2010. Mycoscience52, 6979. 10.1007/S10267-010-0068-1

  • 12

    DaiY. C. (2012). Polypore diversity in China with an annotated checklist of Chinese polypores. Mycoscience53, 4980. 10.1007/s10267-011-0134-3

  • 13

    DaiY. C.CuiB. K.SiJ.HeS. H.HydeK. D.YuanH. S.et al. (2015). Dynamics of the worldwide number of fungi with emphasis on fungal diversity in China. Mycol. Prog.14, 62. 10.1007/s11557-015-1084-5

  • 14

    DaiY. C.WeiY. L.ZhangX. Q. (2004). An annotated checklist of non-poroid Aphyllophorales in China. Ann. Bot. Fennici41, 233247.

  • 15

    DaiY. C.YangZ. L.CuiB. K.WuG.YuanH. S.ZhouL. W.et al. (2021). Diversity and systematics of the important macrofungi in Chinese forests. Mycosystema40, 770805.

  • 16

    DonkM. A. (1957). Notes on resupinate Hymenomycetes IV. Fungus27, 129.

  • 17

    DuhemB. (2010). Deux corticiés nouveaux méditerranéens à spores allantoïdes. Cryptogam. Mycol.31, 143152.

  • 18

    ErikssonJ.HjortstamK.RyvardenL. (1978). Corticiaceae of North Europe Volume 5: Mycoaciella-Phanerochaete. Oslo: Fungiflora.

  • 19

    ErikssonJ.HjortstamK.RyvardenL. (1981). Corticiaceae of North Europe Volume 6: Phlebia-Sarcodontia. Oslo: Fungiflora.

  • 20

    ErikssonJ.HjortstamK.RyvardenL. (1984). Corticiaceae of North Europe Volume 7: Schizopora-Suillosporium. Oslo: Fungiflora.

  • 21

    FelsensteinJ. (1985). Confidence intervals on phylogenetics: an approach using bootstrap. Evolution39, 783791. 10.1111/j.1558-5646.1985.tb00420.x

  • 22

    FriesE. (1821–1832). Systema Mycologicum, Sistens Fungorum Ordines, Generaet Species Hucusque Cognitas. Gryphiswaldiae: Ernestus Mauritius.

  • 23

    FriesE. (1828). Elenchus Fungorum. Vols. I and II. Germany: Greifswald.

  • 24

    FriesE. (1857–1863). Monographia Hymenomycetum Sueciae. Vols. I and II. Leffler, C. A.Uppsala: Nabu Press.

  • 25

    FriesE. (1874). Hymenomycetes Europaei. Berling; Uppsala: Typis descripsip Ed. p. 755.

  • 26

    GafforovY.OrdynetsA.LangerE.YarashevaM.de Mello GugliottaA.SchigelD.et al. (2020). Species diversity with comprehensive annotations of wood-inhabiting poroid and corticioid fungi in Uzbekistan. Front. Microbiol.11, 598321. 10.3389/fmicb.2020.598321

  • 27

    Garcia-SandovalR.WangZ.BinderM.HibbettD. S. (2010). Molecular phylogenetics of the Gloeophyllales and relative ages of clades of Agaricomycotina producing a brown rot. Mycologia103, 510524. 10.3852/10-209

  • 28

    GilbertJ. E. (1931). Les Bolets, in les livres du Mycologue. Paris: Le Village du Livre. p. 254.

  • 29

    GilbertsonR. L.BlackwellM. (1987). Notes on wood-rotting fungi on Junipers in the Gulf Coast region. II. Mycotaxon28, 369402.

  • 30

    GilbertsonR. L.RyvardenL. (1987). North American Polypores 1-2. Fungiflora; Oslo: Lubrecht and Cramer Ltd. p. 1433.

  • 31

    GómezC. E. (1972). Xenasma y géneros afines de los alrededores de Buenos Aires (Aphyllophorales). Bol Soc Argent Bot14, 269281.

  • 32

    Gonzalez-AvilaA.Contreras-MedinaR.EspinosaD.Luna-VegaI. (2017). Track analysis of the order Gomphales (Fungi: Basidiomycota) in Mexico. Phytotaxa316, 2238. 10.11646/phytotaxa.316.1.2

  • 33

    Grosse-BrauckmannH.KummerV. (2004). Fünf bemerkenswerte Funde corticioider Pilze aus Deutschland. Feddes Repert.115, 90101. 10.1002/fedr.200311029

  • 34

    HaelewatersD.DirksA. C.KapplerL. A.MitchellJ. K.QuijadaL.VandegriftR.et al. (2018). A preliminary checklist of fungi at the Boston Harbor Islands. Northeast. Nat.25, 4576. 10.1656/045.025.s904

  • 35

    HallenbergN. (1978). Wood-Fungi (Corticiaceae, Coniophoraceae, Lachnocladiaceae, Thelephoraceae) in N. Iran. I. Iran. J. Plant Pathol. 14, 3887.

  • 36

    HeM. Q.ZhaoR. L.HydeK. D.BegerowD.KemlerM.YurkovA.et al. (2019). Notes, outline and divergence times of Basidiomycota. Fungal Divers.99, 105367. 10.1007/s13225-019-00435-4

  • 37

    HibbettD. S.BinderM.BischoffJ. F.BlackwellM.CannonP. F.ErikssonO. E.et al. (2007). A higher-level phylogenetic classification of the Fungi. Mycol. Res.111, 509547. 10.1016/j.mycres.2007.03.004

  • 38

    HjortstamK. (1983). Notes on Corticiaceae (Basidiomycetes). XII. Mycotaxon17, 577584.

  • 39

    HjortstamK.LarssonK. H. (1987). Additions to Phlebiella (Corticiaceae, Basidiomycetes), with notes on Xenasma and Sistotrema. Mycotaxon29, 315319.

  • 40

    HjortstamK.RyvardenL. (2005). New taxa and new combinations in tropical corticioid fungi, (Basidiomycotina, Aphyllophorales). Synop. Fungorum20, 3341.

  • 41

    HjortstamK.RyvardenL. (2007). Studies in corticioid fungi from Venezuela III (Basidiomycotina, Aphyllophorales). Synop. Fungorum23, 56107.

  • 42

    HöhnelF.LitschauerV. (1908). Beiträge zur Kenntnis der Corticieen: III. Sitz. K. Akad. Wiss. Math. Naturw. Klasse Abt. I.117, 10811124.

  • 43

    HuangR. X.ChenJ. Z.WuJ. R.ZhaoC. L. (2019). Phlebiella ailaoshanensis sp. nov. (Polyporales, Basidiomycota) described from China. Phytotaxa419, 105109. 10.11646/phytotaxa.419.1.8

  • 44

    JacksonH. S. (1950). Studies of Canadian Thelephoraceae. VII. Some new species of Corticium, section Athele. Can. J. Res.28, 716725. 10.1139/cjr50c-045

  • 45

    JamesT. Y.StajichJ. E.HittingerC. T.RokasA. (2020). Toward a fully resolved fungal tree of life. Annu. Rev. Microbiol.74, 291313. 10.1146/annurev-micro-022020-051835

  • 46

    JaroschM. (2001). Zur molekularen systematik der boletales: coniophorineae, paxillineae und suillineae. Bibl. Mycol.191, 1158.

  • 47

    JaroschM.BeslH. (2001). Leucogyrophana, a polyphyletic genus of the order boletales (Basidiomycetes). Plant Biol.3, 443448. 10.1055/s-2001-16455

  • 48

    JülichW. (1979). Studies in resupinate Basidiomycetes - V. On some new taxa. Persoonia10, 325336.

  • 49

    KirkP. M.CannonP. F.DavidJ. C.MinterD. W.StalpersJ. A. (2008). Ainsworth and bisby's dictionary of the fungi. 10th ed. Wallingford, Oxon, UK: CAB International Press, 783.

  • 50

    LarssonA. (2014). AliView: a fast and lightweight alignment viewer and editor for large data sets. Bioinformatics30, 32763278. 10.1093/bioinformatics/btu531

  • 51

    LarssonE.HallenbergN. (2001). Species delimitation in the Gloeocystidiellum Porosum-Clavuligerum complex inferred from compatibility studies and nuclear RDNA sequence data. Mycologia93, 907914. 10.1080/00275514.2001.12063225

  • 52

    LarssonE.LarssonK. H. (2003). Phylogenetic relationships of Russuloid Basidiomycetes with emphasis on Aphyllophoralean taxa. Mycologia95, 10371065. 10.1080/15572536.2004.11833020

  • 53

    LarssonK. H. (2007). Re-thinking the classification of corticioid fungi. Mycol. Res.111, 10401063. 10.1016/j.mycres.2007.08.001

  • 54

    LarssonK. H.LarssonE.KoljalgU. (2004). High phylogenetic diversity among corticioid homobasidiomycetes. Mycol. Res.108, 9831002. 10.1017/S0953756204000851

  • 55

    LarssonK. H.LarssonE.RyvardenL.SpirinV. (2020). Some new combinations of corticioid fungi (Basidiomycota. Agaricomycetes). Synop. Fungorum40, 113117.

  • 56

    LarssonK. H.ParmastoE.FischerM.LangerE.NakasoneK. K.RedheadS. A. (2006). Hymenochaetales: a molecular phylogeny for the hymenochaetoid clade. Mycologia98, 926936. 10.1080/15572536.2006.11832622

  • 57

    MaekawaN. (2021). Taxonomy of corticioid fungi in Japan: present status and future prospects. Mycoscience62, 345355. 10.47371/mycosci.2021.10.002

  • 58

    MillerM. A.PfeifferW.SchwartzT. (2012). The CIPRES science gateway: enabling high-impact science for phylogenetics researchers with limited resources. Assoc. Comput. Mach.39, 18. 10.1145/2335755.2335836

  • 59

    NúñezM.RyvardenL. (2001). East Asian polypores 2. Synop. Fungorum14, 165522.

  • 60

    NylanderJ. A. A. (2004). MrModeltest v2. Program Distributed by the Author. Uppsala: Evolutionary Biology Centre; Uppsala Univeristy.

  • 61

    OberwinklerF. (1966). Primitive Basidiomyceten. Revision einiger Formenkreise von Basidienpilzen mit plastischer Basidie. Sydowia19, 172.

  • 62

    OberwinklerF. (1975). Eine agaricoide Gattung der Thelephorales. Sydowia28, 359362.

  • 63

    ParmastoE. (1965). Corticiaceae U.R.S.S. I. Descriptiones taxorum novarum. Combinationes novae. Eesti NSV Tead. Akad. TOIM.14, 220233. 10.3176/biol.1965.2.06

  • 64

    ParmastoE. (1968). Conspectus Systematis Corticiacearum. Spain: Euorpa Press. p. 1261.

  • 65

    PetersenJ. H. (1996). Farvekort. The Danish Mycological Society's Colour-Chart.Greve: Foreningen til Svampekundskabens Fremme.

  • 66

    PiatekM. (2005). A note on the genus Xenosmatella (Fungi, Basidiomycetes). Polish Bot. J.50, 1113.

  • 67

    PouzarZ. (1982). Taxonomic studies in resupinate fungi I. Ceská Mykol.36, 141145.

  • 68

    RattanS. S. (1977). The resupinate Aphyllophorales of the North Western Himalayas. Bibl. Mycol.60, 1427.

  • 69

    RaynerR. W. (1970). A Mycological Colour Chart. Commonwealth Mycological Institute, Kew and British Mycological Society, Kew, United Kingdom. p. 134.

  • 70

    RobertsP. J. (2007). Phlebiella caricis-pendulae: A new corticoid fungus from Wales. Synop. Fungorum22, 2526.

  • 71

    RonquistF.TeslenkoM.van der MarkP.AyresD. L.DarlingA.HohnaS.et al. (2012). Mrbayes 3.2: efficient bayesian phylogenetic inference and model choice across a large model space. Syst. Biol.61, 539542. 10.1093/sysbio/sys029

  • 72

    RosenthalL. M.LarssonK. H.BrancoS.ChungJ. A.GlassmanS. I.LiaoH. L.et al. (2017). Survey of corticioid fungi in North American pinaceous forests reveals hyperdi-versity, underpopulated sequence databases, and species that are potentially ectomycorrhizal. Mycologia109, 115127. 10.1080/00275514.2017.1281677

  • 73

    RyvardenL.LibertaA. E. (1978). Contribution to the Aphyllophoralles of the Canary Islands 4. Two new species of Trechispora and Xenmastella. Can. J. Bot.56, 26172619. 10.1139/b78-314

  • 74

    RyvardenL.MeloI. (2014). Poroid fungi of Europe. Synop. Fungorum31, 1455.

  • 75

    SotomeK.HattoriT.OtaY. (2011). Taxonomic study on a threatened polypore, Polyporus pseudobetulinus, and a morphologically similar species, P. subvarius. Mycoscience52, 319326. 10.1007/S10267-011-0111-X

  • 76

    StalpersJ. A. (1996). The aphyllophoraceous fungi II. Keys to the species of the Hericiales. Stud. Mycol.40, 1185.

  • 77

    SvrcekM. (1973). Species novae Corticiacearum e Bohemia. Ceská Mykol. 27, 201206.

  • 78

    SwoffordD. L. (2002). PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods). Version 4.0b10. Sunderland, Massachusetts: Sinauer Associates.

  • 79

    TelleriaM. T.MeloI.DuenasM.LarssonK. H.Paz MartinM. P. (2013). Molecular analyses confirm Brevicellicium in Trechisporales. IMA Fungus4, 2128. 10.5598/imafungus.2013.04.01.03

  • 80

    TobiasW.MichaelF. (2002). Classification and phylogenetic relationships of Hymenochaete and allied genera of the Hymenochaetales, inferred from rDNA sequence data and nuclear behaviour of vegetative mycelium. Mycol. Prog.1, 93104. 10.1007/s11557-006-0008-9

  • 81

    VuD.GroenewaldM.de VriesM.GehrmannT.StielowB.EberhardtU.et al. (2019). Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. Stud. Mycol.92, 135154. 10.1016/j.simyco.2018.05.001

  • 82

    WagnerT.FischerM. (2001). Natural groups and a revised system for the European poroid Hymenochaetales (Basidiomycota) supported by nLSU rDNA sequence data. Mycol. Res.105, 773782. 10.1017/S0953756201004257

  • 83

    WhiteT. J.BrunsT.LeeS.TaylorJ. (1990). “Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics,” in PCR protocols: A Guide to Methods And Applications, eds InnisM. A.GelfandD. H.SninskyJ. J.WhiteT. J. (San Diego, CA: Academic Press), 315322.

  • 84

    WuF.YuanH. S.ZhouL. W.YuanY.CuiB. K.DaiY. C. (2020). Polypore diversity in South China. Mycosystema39, 653682.

  • 85

    WuF.YuanY.ZhaoC. L. (2015). Porpomyces submucidus (Hydnodontaceae, Basidiomycota), a new species from tropical China based on morphological and molecular evidence. Phytotaxa230, 6168. 10.11646/phytotaxa.230.1.5

  • 86

    WuF.ZhouL. W.VlasákJ.DaiY. C. (2022). Global diversity and systematics of Hymenochaetaceae with poroid hymenophore. Fungal Divers.113, 1192. 10.1007/s13225-021-00496-4

  • 87

    ZhaoC. L.WuZ. Q. (2017). Ceriporiopsis kunmingensis sp. nov. (Polyporales, Basidiomycota) evidenced by morphological characters and phylogenetic analysis. Mycol. Prog.16, 93100. 10.1007/s11557-016-1259-8

  • 88

    ZhaoW.ZhaoC. L. (2021). The phylogenetic relationship revealed three new wood-inhabiting fungal species from genus Trechispora. Front. Microbiol.12, 650195. 10.3389/fmicb.2021.650195

  • 89

    ZhuL.SongJ.ZhouJ. L.SiJ.CuiB. K. (2019). Species diversity, phylogeny, divergence time and biogeography of the genus Sanghuangporus (Basidiomycota). Front. Microbiol.10, 812. 10.3389/fmicb.2019.00812

  • 90

    ZongT. K.WuJ. R.ZhaoC. L. (2021). Three new Xenasmatella (Polyporales, Basidiomycota) species from China. Phytotaxa489, 111120. 10.11646/phytotaxa.489.2.1

  • 91

    ZongT. K.ZhaoC. L. (2021). Morphological and molecular identification of two new species of Phlebiella (Polyporales, Basidiomycota) from southern China. Nova Hedwig.112, 501514. 10.1127/nova_hedwigia/2021/0628

Summary

Keywords

biodiversity, fungal systematics, ITS, LSU, new taxa, wood-decaying fungi, Xenasmatales, Xenasmatella nigroidea

Citation

Luo K-Y and Zhao C-L (2022) Morphology and multigene phylogeny reveal a new order and a new species of wood-inhabiting basidiomycete fungi (Agaricomycetes). Front. Microbiol. 13:970731. doi: 10.3389/fmicb.2022.970731

Received

16 June 2022

Accepted

08 August 2022

Published

31 August 2022

Volume

13 - 2022

Edited by

Samantha Chandranath Karunarathna, Qujing Normal University, China

Reviewed by

Yusufjon Gafforov, Academy of Science of the Republic of Uzbekistan, Uzbekistan; Kalani Hapuarachchi, Guizhou University, China

Updates

Copyright

*Correspondence: Chang-Lin Zhao

This article was submitted to Microbe and Virus Interactions with Plants, a section of the journal Frontiers in Microbiology

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All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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