Frontiers in Microbiology

Original Research

Published on 08 Oct 2026

Phenotypic and genotypic characterization of listeria monocytogenes strains isolated from meat industries

in Food Microbiology

Despina Vougiouklaki
Markos Dalezios
Konstantina Kyriakou
Marios Papaparaskevas
Marina Siouti
Simen Akkermans
Jan F. M. Impe
Efstathia Tsakali
Dimitra Houhoula

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1922185

518 views

General Commentary

Published on 08 Oct 2026

Commentary: Resistance breakers: a novel approach to tackle biofilm associated infections and antimicrobial resistance

in Antimicrobials, Resistance and Chemotherapy

Wenjie Guo
Ke Xue

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1976224

123 views

Original Research

Published on 08 Oct 2026

Metagenomic and culture-dependent characterization of between-field variation in phosphorus-cycling microbial communities and functional potential across tobacco–safflower rotation fields

in Terrestrial Microbiology

You Luo
Yu Wang
Zhufeng Shi
Zilin Li
Te Pu
Yanni Wang
Ming Ni
Xun He
Jing Li
Chenying Li

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1983930

156 views

Original Research

Published on 08 Oct 2026

Integrated gut microbiome and serum metabolomics identify candidate metabolic signatures of uric acid nephropathy

in Microorganisms in Vertebrate Digestive Systems

Min Cui
Sheng Li
Chenyu Wang
Jingxiu Dou
Yunyun Zhu
Qin Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1941602

Original Research

Published on 08 Oct 2026

Metagenomic and metabolomic analysis of the early gut microbiota development in Nipponia nippon

in Microorganisms in Vertebrate Digestive Systems

Hongqing Bai
Guoqiang Qiu
Jian Shi
Yu Xue
Wenwen Dai
Qian Liu
Xiaolong Zhou
Ke He

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1909232

210 views

Original Research

Published on 08 Oct 2026

Rapid restructuring of surface-water bacterial communities across the spring-to-early-summer transition in a water-conservancy reservoir

in Aquatic Microbiology

Ding Li
Yijun Liu
Xiaoping Wu
Yulin Lu
Xinyu Wu
Xiyao Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1992256

122 views

Original Research

Published on 08 Oct 2026

Pathway-level analysis suggests a maintenance-oriented transcriptional response of the ammonia-oxidizing bacterium Nitrosospira sp. NT to acidic pH

in Physiology and Metabolism of Microorganisms

Yuxiang Song
Zhongjun Jia

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1957381

109 views

Original Research

Published on 08 Oct 2026

Diet formulations with graded C:N ratios are associated with intestinal microbiota and health responses in GIFT tilapia (Oreochromis niloticus)

in Microbial Symbioses

Bocheng Huang
Xiangqin Lin
Shuyan Chi
Hongyu Liu
Shiwei Xie
Beiping Tan
Chao Ran
Zhigang Zhou
Junming Deng

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1918261

110 views

Systematic Review

Published on 08 Oct 2026

Global trends in phage-derived depolymerase research for anti-infective applications: a bibliometric analysis

in Phage Biology

Guanglin Li
Junhui Li
Xiao Ma
Peipei Zhang
Jiye Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1947768

174 views

Original Research

Published on 08 Oct 2026

Long-term organic fertilization enhances paddy soil nitrogen availability through direct nutrient stimulation and complementary diazotroph-mediated pathway

in Terrestrial Microbiology

Li Wen
Chao Li
Kaikai Cheng
Lihong Shi
Lingling Liu
Shijie Qin
Ke Wang
Peng Jiang
Haiming Tang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1923757

298 views

Original Research

Published on 08 Oct 2026

Soluble prebiotic fiber and glucono-δ-lactone blends integrate compatible effects to modulate microbiota composition and metabolism ex vivo

in Microorganisms in Vertebrate Digestive Systems

Damien Truffin
Caroline Perreau
Liam Jenkins Sánchez
Jasmine Heyse
Aurélien Baudot
Lam Dai Vu
Emma De Beul
Pieter Van den Abbeele

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1923298

259 views

Original Research

Published on 08 Oct 2026

Determinants of bacteriophage Qβ survival under ionizing radiation: roles of hydration, mineral matrices, and viral features

in Extreme Microbiology

Alicia Rodríguez-Moreno
Kristina Beblo-Vranesevic
Ester Lázaro

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1958185

234 views

Original Research

Published on 08 Oct 2026

Integrative phenotypic and transcriptomic validation of an alveolar-like macrophage model reveals early host–pathogen dynamics during Aspergillus fumigatus infection

in Infectious Agents and Disease

Jeany Söhnlein
Sascha Schäuble
Juan Prada Salcedo
Zahraa Abboud
Dalia Sheta
Kerstin Hünniger-Ast
Michelle Seif
Hermann Einsele
Thomas Dandekar
Gianni Panagiotou

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1922948

195 views

Original Research

Published on 08 Oct 2026

Microbial quotient responses to altitudinal and edaphic variability in Himalayan apple orchard soil

in Terrestrial Microbiology

Stanzin Khenrab
Sarabdeep Kour
Vikas Sharma
Tsering Lanzes
Tsewang Dolma
Disket Dolkar
Mohd Rafee
Sourav Singh
Manjot Singh Sidhu
Jigmet Namgial

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1957054

513 views

Original Research

Published on 08 Oct 2026

Colonization, growth-promoting effect, control efficacy against tobacco black shank, and mechanism of action of the tobacco endophyte Microbacterium foliorum 5SY32

in Microbe and Virus Interactions with Plants

Wei Zheng
Haibang Du
Dongling Wu
Jianqiang Xu
Yebin Kang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1887697

495 views

Original Research

Published on 08 Oct 2026

A novel multiplex assay for species-level identification of non-tuberculous mycobacteria in culture-positive respiratory specimens based on capillary electrophoresis: development and clinical validation

in Infectious Agents and Disease

Zhen Li
Yaocheng Wang
Li Lai
Yi Huang
Li Li

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1966137

139 views

Editorial

Published on 08 Oct 2026

Editorial: Green biomanufacturing by industrial microorganisms: precise regulation and system optimization

in Microbiotechnology

Xiang Zhou
Hongzhen Luo
Jun Liu
Shuo Han

Frontiers in Microbiology

doi 10.3389/fmicb.2026.2007772

136 views

Original Research

Published on 08 Oct 2026

Clinical factors associated with carbapenem resistance and in-hospital mortality in Klebsiella pneumoniae bloodstream infection: a 7-year retrospective cohort study

in Antimicrobials, Resistance and Chemotherapy

Na Xu
Yi Liang
Wen Zhu
Feng Lin
Yang Zhang
Jia Li

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1872672

191 views

Original Research

Published on 08 Oct 2026

Nitrogen addition alters soil microbial community structure and decrease nitrogen cycling gene abundance in acidic macadamia orchard soils

in Terrestrial Microbiology

Linyu Qu
Tinghong Ye
Xiyong He
Liping Yang
Xiaorong Huang
Zhe Chen
Haiqing Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1878175

215 views

Original Research

Accepted on 07 Oct 2026

Host species identity outweighs life form in shaping the root endophytic bacterial communities of ten Cymbidium species grown under uniform conditions

in Microbe and Virus Interactions with Plants

Xueda Chen
Rui Fang
Tinghua Zhang
Guanfei Zhao
Fang Wang

Frontiers in Microbiology

Original Research

Accepted on 07 Oct 2026

Temporal enrichment of bacterial monoamine oxidase gene aboard the International Space Station and neuromodulator impacts of dopamine-driven ammonium formed by space isolate Leifsonia virtsii on Caenorhabditis elegans

in Extreme Microbiology

Naikap Mayuri
Honagodu Ravichandra Dhanyashree
Rajesh P Shastry
Kasthuri Venkateswaran
Georgios Miliotis
Nitin Kumar Singh
Paul Stothard
Ananthapadmanabha Bhagwath Arun
Asif Hameed

Frontiers in Microbiology

Original Research

Accepted on 07 Oct 2026

Salvianolic acid C from the traditional Chinese medicine Salvia miltiorrhiza Bunge: a potential drug targeting influenza virus neuraminidase

in Virology

Ziqing Luo
Sha Li
Lijuan Qiu
Xiangfei Zhu
Xingjian Liu
Caijing Zou
Geng Li

Frontiers in Microbiology

Original Research

Accepted on 07 Oct 2026

Fish-derived Loigolactobacillus coryniformis LJR-37 enhances growth performance and disease resistance in tench in association with altered gut microbial ecology and predicted metabolic potential

in Microorganisms in Vertebrate Digestive Systems

Jiarui Lin
Sibo Liu
Donghui Tang
Guanhua Zhu
Yinghui He
Nuo Xu
Kuo Wang
Wanli Sha
Baishuang Yin
Wenlong Dong

Frontiers in Microbiology

Review

Accepted on 07 Oct 2026

Beneficial Microbes in Plant Salt Stress Tolerance: Mechanisms, Antioxidant Defense, and Multi-Omics Insights

in Microbe and Virus Interactions with Plants

Shubhangi Shree
Anjali Chaudhary
Subhash Kumar
Kunal Singh
Namo Dubey

Frontiers in Microbiology

42,064 articles

articles

Phenotypic and genotypic characterization of listeria monocytogenes strains isolated from meat industries

Commentary: Resistance breakers: a novel approach to tackle biofilm associated infections and antimicrobial resistance

Metagenomic and culture-dependent characterization of between-field variation in phosphorus-cycling microbial communities and functional potential across tobacco–safflower rotation fields

Integrated gut microbiome and serum metabolomics identify candidate metabolic signatures of uric acid nephropathy

Metagenomic and metabolomic analysis of the early gut microbiota development in Nipponia nippon

Rapid restructuring of surface-water bacterial communities across the spring-to-early-summer transition in a water-conservancy reservoir

Pathway-level analysis suggests a maintenance-oriented transcriptional response of the ammonia-oxidizing bacterium Nitrosospira sp. NT to acidic pH

Diet formulations with graded C:N ratios are associated with intestinal microbiota and health responses in GIFT tilapia (Oreochromis niloticus)

Global trends in phage-derived depolymerase research for anti-infective applications: a bibliometric analysis

Long-term organic fertilization enhances paddy soil nitrogen availability through direct nutrient stimulation and complementary diazotroph-mediated pathway

Soluble prebiotic fiber and glucono-δ-lactone blends integrate compatible effects to modulate microbiota composition and metabolism ex vivo

Determinants of bacteriophage Qβ survival under ionizing radiation: roles of hydration, mineral matrices, and viral features

Integrative phenotypic and transcriptomic validation of an alveolar-like macrophage model reveals early host–pathogen dynamics during Aspergillus fumigatus infection

Microbial quotient responses to altitudinal and edaphic variability in Himalayan apple orchard soil

Colonization, growth-promoting effect, control efficacy against tobacco black shank, and mechanism of action of the tobacco endophyte Microbacterium foliorum 5SY32

A novel multiplex assay for species-level identification of non-tuberculous mycobacteria in culture-positive respiratory specimens based on capillary electrophoresis: development and clinical validation

Editorial: Green biomanufacturing by industrial microorganisms: precise regulation and system optimization

Clinical factors associated with carbapenem resistance and in-hospital mortality in Klebsiella pneumoniae bloodstream infection: a 7-year retrospective cohort study

Nitrogen addition alters soil microbial community structure and decrease nitrogen cycling gene abundance in acidic macadamia orchard soils

Host species identity outweighs life form in shaping the root endophytic bacterial communities of ten Cymbidium species grown under uniform conditions

Temporal enrichment of bacterial monoamine oxidase gene aboard the International Space Station and neuromodulator impacts of dopamine-driven ammonium formed by space isolate Leifsonia virtsii on Caenorhabditis elegans

Salvianolic acid C from the traditional Chinese medicine Salvia miltiorrhiza Bunge: a potential drug targeting influenza virus neuraminidase

Fish-derived Loigolactobacillus coryniformis LJR-37 enhances growth performance and disease resistance in tench in association with altered gut microbial ecology and predicted metabolic potential

Beneficial Microbes in Plant Salt Stress Tolerance: Mechanisms, Antioxidant Defense, and Multi-Omics Insights