Frontiers in Microbiology

Original Research

Published on 28 Jan 2026

Genomic-based biosurveillance for avian influenza: whole genome sequencing from wild mallards sampled during autumn migration in 2022–2023 reveals a high co-infection rate on migration stopover site in Georgia

in Virology

Ana Papkiauri
Lela Urushadze
Tea Tevdoradze
Ketevan Sidamonidze
Giorgi Tomashvili
Mari Gavashelidze
Levan Ninua
Ivane Daraselia
Sopio Kiknavelidze
Nika Melikishvili

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1735728

225 views

Original Research

Published on 28 Jan 2026

Genomic analysis of non-carbapenem drug-resistant Gram-negative bacteria from advanced chronic liver disease (ACLD) patients suggests no evidence for in-house transmissions

in Infectious Agents and Disease

Christopher D. Best
Zahra Nemati
Tilman Schultze
Michael Hogardt
Camilla Cadoli
Marcus M. Mücke
Toska Wiedemann
Hans-Peter Erasmus
Christoph Welsch
Volkhard A. J. Kempf

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1740272

181 views

Original Research

Published on 28 Jan 2026

Exploring the bacterial diversity and its antibiotic resistance in Kabru Glacier ice cores, Sikkim Himalaya

in Extreme Microbiology

Sonia Tamang
Mingma Thundu Sherpa
Santosh Kumar
Ishfaq Nabi Najar
Prayatna Sharma
Sayak Das
Namrata Jiya
Avinash Sharma
Piyush Pandey
Nagendra Thakur

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1672943

365 views

Original Research

Published on 28 Jan 2026

Diversity of DNA viruses in the atmosphere of sub-Antarctic South Georgia

in Extreme Microbiology

Ritam Das
Lucie Malard
David A. Pearce
Peter Convey
Janina Rahlff

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1726848

471 views

Original Research

Published on 28 Jan 2026

Dissecting Zika virus transmission by Aedes aegypti and Culex quinquefasciatus mosquitoes to a vertebrate host and its coinfection with Mayaro virus

in Virology

Larissa Krokovsky
Carlos Ralph Batista Lins
Duschinka Ribeiro Duarte Guedes
Gabriel da Luz Wallau
Constância Flávia Junqueira Ayres
Marcelo Henrique Santos Paiva

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1724153

435 views

Original Research

Published on 28 Jan 2026

Accumulation of 2-methylcitrate induces metabolic imbalance in Bacillus thuringiensis, revealing a detoxification strategy mediated by an internal promoter

in Microbial Physiology and Metabolism

Cuiying Du
Lanteng Zheng
Ke Fu
Rui Wang
Zhuofan Liu
Fengxian Liang
Chenyi Zeng
Xuanmingyue Zhou
Tingting Yang
Yujun Dai

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1675856

163 views

Review

Published on 28 Jan 2026

Targeting vaginal dysbiosis: prospects for the application of live biotherapeutics products

in Microorganisms in Vertebrate Digestive Systems

Qiongqiong Zhang
Xiaoxiao Zhao
Zhangran Chen
Rui Chen
Xiong Lin
Lei Zhang
Kangning Li
Min Wang
Yanmin Liu
Huan Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1749581

151 views

Original Research

Published on 28 Jan 2026

CRISPR-Cas9-driven genome editing in Bacillus methanolicus MGA3

in Microbiotechnology

May L. K. Khider
Marta Irla
Marina Gil López
Anna Gispert
Thomas Konjetzko
Meliawati Meliawati
Jochen Schmid
Trygve Brautaset
Luciana Fernandes Brito

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1728984

628 views

Original Research

Published on 28 Jan 2026

Metabolic interplay in a synthetic consortium: insights into the mediating role of a minority species

in Microbial Physiology and Metabolism

Cassandra Backes
David Ranava
Pascale Infossi
Louis Delecourt
Magali Roger
Marie-Thérése Giudici-Orticoni

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1682391

125 views

Original Research

Published on 28 Jan 2026

Spatial heterogeneity of soil phosphorus influencing bacterial functional adaptations in alkaline calcareous soils

in Terrestrial Microbiology

Saira Tabbasum
Mahreen Yahya
Munir Zia
Midrar ul Haq
Samina Anwar
Usama Azeem Khan
Naima Mahreen
Khansa Ejaz
Mika Tapio Tarkka
Sumera Yasmin

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1720323

278 views

Original Research

Published on 28 Jan 2026

Comprehensive genomic analysis of multidrug-resistant Pseudomonas aeruginosa isolates from companion animals in Germany

in Antimicrobials, Resistance and Chemotherapy

Marwa Bassiouny
Hanka Brangsch
Ivonne Stamm
Peter A. Kopp
Heinrich Neubauer
Lisa D. Sprague

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1754860

105 views

Original Research

Published on 28 Jan 2026

Molecular epidemiology and genetic evolution of PRRSV ORF5 in Sichuan, Southwest China

in Infectious Agents and Disease

Jifeng Yu
Runmin Kang
Yi Qing
Qingsong Xu
Jing Xie
Ye Cao
Yonggang Ye
Lu Xiao
Lei Xie
Xiaoxue Xiang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1753001

151 views

Original Research

Accepted on 27 Jan 2026

Advancing Aquafeed: Prebiotic, Antimicrobial, Antioxidant and Immunomodulatory Benefits of Innovative Ingredients from Farming Systems

in Aquatic Microbiology

Mariana Girão
Diogo Amaral
Gabriel Campos
Ralph Urbatzka
Helena Peres
Rodrigo Ozorio
Maria Fátima Carvalho

Frontiers in Microbiology

Perspective

Accepted on 27 Jan 2026

Probiotic-Based Therapeutics for a One Health Future: Redefining Antibiotic Dependency to Combat Antimicrobial Resistance

in Antimicrobials, Resistance and Chemotherapy

Dr. Veilumuthu Pattapulavar
Sanjai Kumar S
Sathiyabama Ramanujam
Dr. Saranyadevi S
John Godwin Christopher

Frontiers in Microbiology

Original Research

Accepted on 27 Jan 2026

Comparative Phylogenetic, Antimicrobial Resistance, and Clinical Characterization of Human Spondylodiscitis-Associated Staphylococcus pseudintermedius

in Infectious Agents and Disease

Jakob Douan
Christian Kohler
Lyubomir Haralambiev
Evgeny A. Idelevich
Karsten Becker

Frontiers in Microbiology

216 views

Original Research

Accepted on 27 Jan 2026

Lactobacillus rhamnosus MY-1 alleviates deoxynivalenol-induced oxidative stress, inflammation, and gut microbiota dysbiosis both in vivo and In vitro

in Microorganisms in Vertebrate Digestive Systems

Yukai Lin
Ruibiao Wang
Jie Yao
Hanqing Zhao
Zuhua Yu
Bo Wen
Yan Yan Jia
Chengshui Liao
Rongxian Guo
Lei Wang

Frontiers in Microbiology

Original Research

Accepted on 27 Jan 2026

Integrative Analysis of Gut Microbiota, Plasma Metabolome, and 1 Gene Expression Identifies Causal Mediators in Graves' Disease 2 Pathogenesis

in Systems Microbiology

Yuying Zhang
Jine Li
Yunfei Luo
Shuang Liu
Jianping Liu

Frontiers in Microbiology

Original Research

Accepted on 27 Jan 2026

Restaurant occupational exposure affects the profiles of oral and gut pathobiomes and resistomes

in Antimicrobials, Resistance and Chemotherapy

Mengyu Wang
Xueqin Li
Xiao Liu
Ying Ye
Peng Zhou
Yifan Liu
Liudan Zhu
Wei Wei
Zhenpeng Li
Zhe Li

Frontiers in Microbiology

Original Research

Accepted on 27 Jan 2026

Genome-Based Taxonomic Classification of Listeria phage and Diversity Analysis of Major Capsid Protein, Receptor-Binding Protein and Endolysin

in Phage Biology

Jinni Chen
Hao Zhou
Lingyun Liu
Pan Mao
Lingling Li
Xuefang Xu
Ji Pu
Jing Yang
Hui Sun
Xia Luo

Frontiers in Microbiology

Original Research

Accepted on 27 Jan 2026

Online parrot trade as a source of Psittacosis caused by a novel Chlamydia psittaci ST388

in Infectious Agents and Disease

Wenwu YAO
Guoxiang Shi
Kai Song
Lingbo Wang
Zhuoying Wu
Qijie Zhao
Zhouwei Chen
Zhifang Kong
Yajun Song
Beibei Wu

Frontiers in Microbiology

Correction

Published on 27 Jan 2026

Correction: Biochar and organic fertilizer drive the bacterial community to improve the productivity and quality of Sophora tonkinensis in cadmium-contaminated soil

in Microbe and Virus Interactions with Plants

Han Liu
Cui Li
Yang Lin
Yi-jian Chen
Zhan-jiang Zhang
Kun-hua Wei
Ming Lei

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1784094

207 views

Editorial

Published on 27 Jan 2026

Editorial: Diagnostic innovations for microbial pathogens in edible plants: cutting-edge technologies for enhanced detection

in Microbe and Virus Interactions with Plants

Ravinder Kumar
Anirban Roy
Ying Zhai

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1777845

408 views

Review

Published on 27 Jan 2026

Microbial dysbiosis in cholangiocarcinoma

in Microorganisms in Vertebrate Digestive Systems

Yunjia Liu
Shaohui Huang
Yang Zhang
Yuankun Zhang
Yunfei Xu
Yongchang Tang
Sen Guo
Zongli Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2026.1727736

303 views

Original Research

Published on 27 Jan 2026

Disease-driven restructuring of the gut microbiome underlies inflammatory bowel disease dysbiosis

in Microorganisms in Vertebrate Digestive Systems

Zixu Ding
Ke Ren
Yixue Xu
Tong Feng
Kuiqing Cui
Qingyou Liu
Cun Liao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1744574

592 views

39,240 articles

articles

Genomic-based biosurveillance for avian influenza: whole genome sequencing from wild mallards sampled during autumn migration in 2022–2023 reveals a high co-infection rate on migration stopover site in Georgia

Genomic analysis of non-carbapenem drug-resistant Gram-negative bacteria from advanced chronic liver disease (ACLD) patients suggests no evidence for in-house transmissions

Exploring the bacterial diversity and its antibiotic resistance in Kabru Glacier ice cores, Sikkim Himalaya

Diversity of DNA viruses in the atmosphere of sub-Antarctic South Georgia

Dissecting Zika virus transmission by Aedes aegypti and Culex quinquefasciatus mosquitoes to a vertebrate host and its coinfection with Mayaro virus

Accumulation of 2-methylcitrate induces metabolic imbalance in Bacillus thuringiensis, revealing a detoxification strategy mediated by an internal promoter

Targeting vaginal dysbiosis: prospects for the application of live biotherapeutics products

CRISPR-Cas9-driven genome editing in Bacillus methanolicus MGA3

Metabolic interplay in a synthetic consortium: insights into the mediating role of a minority species

Spatial heterogeneity of soil phosphorus influencing bacterial functional adaptations in alkaline calcareous soils

Comprehensive genomic analysis of multidrug-resistant Pseudomonas aeruginosa isolates from companion animals in Germany

Molecular epidemiology and genetic evolution of PRRSV ORF5 in Sichuan, Southwest China

Advancing Aquafeed: Prebiotic, Antimicrobial, Antioxidant and Immunomodulatory Benefits of Innovative Ingredients from Farming Systems

Probiotic-Based Therapeutics for a One Health Future: Redefining Antibiotic Dependency to Combat Antimicrobial Resistance

Comparative Phylogenetic, Antimicrobial Resistance, and Clinical Characterization of Human Spondylodiscitis-Associated Staphylococcus pseudintermedius

Lactobacillus rhamnosus MY-1 alleviates deoxynivalenol-induced oxidative stress, inflammation, and gut microbiota dysbiosis both in vivo and In vitro

Integrative Analysis of Gut Microbiota, Plasma Metabolome, and 1 Gene Expression Identifies Causal Mediators in Graves' Disease 2 Pathogenesis

Restaurant occupational exposure affects the profiles of oral and gut pathobiomes and resistomes

Genome-Based Taxonomic Classification of Listeria phage and Diversity Analysis of Major Capsid Protein, Receptor-Binding Protein and Endolysin

Online parrot trade as a source of Psittacosis caused by a novel Chlamydia psittaci ST388

Correction: Biochar and organic fertilizer drive the bacterial community to improve the productivity and quality of Sophora tonkinensis in cadmium-contaminated soil

Editorial: Diagnostic innovations for microbial pathogens in edible plants: cutting-edge technologies for enhanced detection

Microbial dysbiosis in cholangiocarcinoma

Disease-driven restructuring of the gut microbiome underlies inflammatory bowel disease dysbiosis