ORIGINAL RESEARCH article

Front. Neurol., 13 December 2022

Sec. Pediatric Neurology

Volume 13 - 2022 | https://doi.org/10.3389/fneur.2022.1056947

Tandem mass tag-based quantitative proteomic analysis of effects of multiple sevoflurane exposures on the cerebral cortex of neonatal and adult mice

  • 1. Department of Anesthesiology, Tianjin Medical University General Hospital, Tianjin, China

  • 2. Tianjin Institute of Anesthesiology, Tianjin, China

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Abstract

Introduction:

Sevoflurane is the most commonly used general anesthetic in pediatric surgery, but it has the potential to be neurotoxic. Previous research found that long-term or multiple sevoflurane exposures could cause cognitive deficits in newborn mice but not adult mice, whereas short-term or single inhalations had little effect on cognitive function at both ages. The mechanisms behind these effects, however, are unclear.

Methods:

In the current study, 6- and 60-day-old C57bl mice in the sevoflurane groups were given 3% sevoflurane plus 60% oxygen for three consecutive days, each lasting 2 hours, while those in the control group only got 60% oxygen. The cortex tissues were harvested on the 8th or 62nd day. The tandem mass tags (TMT)pro-based quantitative proteomics combined with liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis, Golgi staining, and western blotting analysis were applied to analyze the influences of multiple sevoflurane anesthesia on the cerebral cortex in mice with various ages. The Morris water maze (MWM) test was performed from postnatal day (P)30 to P36 or P84 to P90 after control or multiple sevoflurane treatment. Sevoflurane anesthesia affected spatial learning and memory and diminished dendritic spines primarily in newborn mice, whereas mature animals exhibited no significant alterations.

Results:

A total of 6247 proteins were measured using the combined quantitative proteomics methods of TMTpro-labeled and LC-MS/MS, 443 of which were associated to the age-dependent neurotoxic mechanism of repeated sevoflurane anesthesia. Furthermore, western blotting research revealed that sevoflurane-induced brain damage in newborn mice may be mediated by increasing the levels of protein expression of CHGB, PTEN, MAP2c, or decreasing the level of SOD2 protein expression.

Conclusion:

Our findings would help to further the mechanistic study of age-dependent anesthetic neurotoxicity and contribute to seek for effective protection in the developing brain under general anesthesia.

1. Introduction

With rapid advances in anesthetic technology, millions of newborns and children worldwide undergo surgical interventions using general anesthesia, rendering child safety a major public health concern (1). Sevoflurane is the most commonly employed inhalational anesthetic in pediatric surgery (2). It has been reported that repeated or long-term sevoflurane exposure prior to 3–4 years of age can increase the potential for future learning and memory challenges (35), although available data remain debatable (6). Furthermore, our previous studies have demonstrated that multiple exposures to inhalational anesthetics, such as sevoflurane, can cause adverse effects, including neuroinflammation, apoptosis, synaptic insufficiency, and cognitive deficits in 6-day-old newborn mice, while 60-day-old adult mice showed no notable damage (711). The mechanisms underlying these age-dependent effects remain elusive.

Quantitative proteomics is a precise method for identifying differentially expressed proteins (DEPs) in biological processes or diseases and predicting therapeutic drug targets and underlying mechanisms (12). The continual development and application of molecular-based technologies have allowed researchers to explore the features of complex regulatory systems (13). Tandem mass tag (TMT)pro-based quantitative proteomics, a quantitative proteomics method, allows a large number of samples to be identified concurrently, thereby reducing batch effects (14). To further investigate the mechanism of age-dependent anesthetic neurotoxicity induced by sevoflurane, we used a combination of TMTpro-labeled quantitative proteomics and liquid chromatography-tandem mass spectrometry (LC-MS/MS) to identify DEPs after multiple inhalations of 3% sevoflurane plus 60% oxygen or 60% oxygen alone in neonatal and adult mice.

2. Materials and methods

2.1. Animals and experimental design

Pregnant mice (gestation days 16–17) and 60-day-old female C57BL/6J mice were purchased from Sibeifu Bioscience Company (license number, SCXK 2019-0010; Beijing, China). The mice were housed under 12 h of natural light and 12 h of darkness at a constant temperature (23 ± 1°C), with unrestricted access to food and water. Female and male newborn mouse pups delivered by pregnant mice were selected for experiments, including proteome analysis and western blotting, whereas only neonatal female mice were selected to undergo behavioral testing and Golgi staining. Mice were randomly allocated to postnatal day (P) 6 + Control, P6 + Sevoflurane, P60 + Control, and P60 + Sevoflurane groups. Twenty mice (n = 5 mice/group) were used for cerebral cortex proteomic analysis, 40 were subjected to the Morris water maze (MWM) test (n = 10 mice/group), 12 underwent Golgi staining (n = 3 mice/group), and 20 were used for western blotting analysis (n = 5 mice/group; Figure 1). All experiments were approved by the Animal Experimental Ethics Committee of Tianjin Medical University General Hospital in Tianjin, China (Approval No. IRB2021-DWFL-210). Every effort was made to reduce the suffering of mice and the number of animals used.

Figure 1

Figure 1

Experimental design. Mice were randomly assigned to four groups: P6 + Control, P6 + Sevoflurane, P60 + Control, and P60 + Sevoflurane. P6 (female plus male) and P60 (female) mice were subjected to 60% O2 + 3% sevoflurane or 60% O2 inhalation for 2 h over 3 consecutive days. Two hours after the last treatment, the cerebral cortex was harvested for TMT-based quantitative proteome analysis and western blotting. After 22 days of treatment, female mice were selected for the Morris water maze (MWM) test and Golgi staining. P6, postnatal day 6; P60, postnatal day 60; TMT, Tandem mass tag.

2.2. Multiple sevoflurane exposures and treatment

As described in our previous study (8), mice in the sevoflurane group were anesthetized using 3% sevoflurane and 60% oxygen at a flow rate of 2 L/min for 2 h per day for three consecutive days; the control group inhalationally administered 60% O2. Mice were exposed to sevoflurane in a transparent chamber (25 × 15 × 10 cm) connected with a sevoflurane-specific vaporizer. During treatment, the sevoflurane concentration was monitored using a gas monitor (Vamos/Vamos Plus; Draeger, Germany). The rectal temperature of mice was maintained at 37 ± 0.5°C using a heating blanket.

2.3. MWM

MWM trials were performed as described in our previous study (9). A circular pool (120 cm diameter × 60 cm height) was filled with opaque water using ~0.5 g/L titanium dioxide powder. The hidden white platform (diameter, 10 cm) was positioned in the center of the first quadrant, submerged 1.0 cm below the water surface. The water temperature in the pool was maintained at 23 ± 1°C. We tested P30 and P84 mice for 7 days (P30–P36; P84–P90), with four trials performed daily in the morning (from 8 to 12 am). The swimming behavior of mice was monitored using an automatic tracking system (Xinruan Information Technology Co. Ltd, Shanghai, China). On successfully locating the hidden platform within 90 s, the stopwatch was automatically stopped, and mice were maintained on the platform for 10 s. If a mouse failed to find the platform within 90 s, the animal was manually guided to the platform and then maintained on the platform for 15 s. To determine the spatial learning and memory performance of mice, we analyzed data related to escape latency during the training stage and platform crossing times in the probe test on P36 or P90. Mice were allowed a 30 min rest interval between each trial for daily training. After each training session, a heating pad was used to maintain a stable body temperature for 10 min.

2.4. Golgi staining and dendritic spine density analysis

The dendritic spine density of cortical neurons was identified using the FD Rapid GolgiStain Kit (Cat#: PK401, FD Neuro Technologies, USA). Mice were well-sedated for 4 min with 3% sevoflurane before decapitation on P30 or P84. Brains were subsequently dissected and immersed in a solution of mercuric chloride, potassium dichromate, and potassium chromate at room temperature for 14 days in the dark. The mixed solution was replaced the next day. Brain tissues were transferred to Solution C at room temperature in the dark for 96–120 h, and Solution C was replaced the following day. The impregnated brains were embedded in 4% agarose and sectioned at 120–150 μm using a Leica Vibratome. The slides were immersed in solutions D and E and Milli-Q water mixes. After careful washing with Milli-Q water, the slices were dehydrated with graded alcohol (50, 75, 95, and 100% ethanol in Milli-Q water) and cleared with xylene. Finally, the slides were sealed with neutral gum and analyzed under a bright field using a Nikon Eclipse TE2000U microscope. Ten pyramidal neurons from each mouse were selected in layers 4/5 of the cerebral cortex, and the dendritic spine density was counted using 10 secondary or third intermediate dendrites of 10-μm length under an oil immersion 100× objective. Thirty dendritic segments from each group were quantified using ImageJ2 (version 2.3, National Institutes of Health, USA). Dendritic spine density was calculated and expressed as the mean number of spines per 10 μm dendritic length.

2.5. Sample collection

Twenty mice were briefly anesthetized with sevoflurane 2 h after the end of treatment and decapitated. The cerebral cortex of each mouse was collected in independent cryogenic vials and stored in liquid nitrogen for rapid freezing. Samples were stored at −80°C until subsequent analysis. We selected TMTpro (16plek) based on 20 samples to reduce the loss of quantification data and counts of experimental batches. Two additional internal standards (IS) were introduced into our experiment as an independent group to reduce the impact of various batches. Both IS were mixtures of TMTpro-labeled peptides from 20 samples. Finally, TMT-based quantitative proteomic analysis with five biological replicates was performed on six groups of 22 samples.

2.6. Cortex homogenization and protein digestion

All tissue samples were homogenized on ice using lysis buffer (4% sodium dodecyl sulfate (SDS), 1 mM DTT, 100 mM Tris-HCl [pH 7.6], and protease inhibitor cocktail), and proteins were measured using the BCA protein assay kit (Bio-Rad Laboratories, USA). Briefly, samples were combined with 30 l SDT buffer (4% SDS, 100 mM DTT, 150 mM Tris-HCl, pH 8.0) for protein digestion. The detergent and DTT were subsequently removed using a mixture of uric acid (UA) buffer (8 M urea, 150 mM Tris-HCl, pH 8.0) and repeated ultrafiltration (Microcon units, 10 kD). Iodoacetamide [IAA; 100 μL iodoacetamide (100 mM IAA in UA buffer)] was added to the samples to block reduced cysteine residues, and samples were incubated in the dark for 30 min. The filters were then thrice washed with 100 μL UA buffer and twice with 100 μL 25 mM NH4HCO3 buffer. The peptides were collected as a filtrate after digestion with 4 g trypsin (Promega) in 40 μL 25 mM NH4HCO3 buffer overnight at 37°C. The peptides were desalted using C18 Cartridges [Sigma-Aldrich, USA, EmporeTM SPE Cartridges C18 (standard density) bed I.D. 7 mm, volume 3 mL], vacuum centrifuged, and reconstituted in 40 μL of 0.1% (v/v) formic acid. The extinction coefficient of 1.1 in the 0.1% (g/l) solution was calculated by considering the frequency of tryptophan and tyrosine in vertebrate proteins to estimate the ultraviolet (UV) light spectral density of peptides at 280 nm.

2.7. TMT labeling

For each sample, 100 μg of the peptide mixture was labeled using the TMTpro 16plek label reagent (Cat#: A44520, Thermo Fisher Scientific, USA) according to the manufacturer's instructions. The experiments were conducted in two batches. One batch comprised a set of peptides from the control group (10 samples) and IS, while the other consisted of peptides from sevoflurane groups (10 samples) and IS. The values of each batch were corrected using batch-specific IS. The samples were labeled using 11 of 16 TMTpro labels, including TMTpro-126, TMTpro-127C, TMTpro-127N, TMTpro-128C, TMTpro-128N, TMTpro-129C, TMTpro-129N, TMTpro-130C, TMTpro-130N, TMTpro-131C, and TMTpro-131N.

2.8. High-pH reversed-phase (RP) fractionation

Labeled peptides were fractionated to increase proteome coverage using a high-pH RP Peptide Fractionation Kit (Cat#:84868, Thermo Fisher Scientific, USA). The peptides were vacuum-dried prior to acidification with 0.1% trifluoroacetic acid (TFA) solution, followed by loading onto an equilibrated, high-pH, RP fractionation spin column. Peptides were bound to the hydrophobic resin under aqueous conditions and then desalted by washing the column with water using low-speed centrifugation at 5,000 × g for 2 min. After removing the solution and packing the resin, the liquid was discarded. To elute bound peptides into 10 separate fractions, a stepwise gradient of increasing acetonitrile (ACN) concentrations in a volatile high-pH elution solution was applied to columns recovered by centrifugation. The recovered fractions were desalted on C18 Cartridges (Cat#: EmporeTM SPE Cartridges C18 (standard density) bed I.D. 7 mm, volume 3 ml, Sigma-Aldrich, MO, USA) and vacuum centrifuged. The lyophilized peptide was re-dissolved in 12 μL of 0.1% formic acid solution (FA). The peptide concentration was measured at an optical density of 280 nm (OD280).

2.9. LC-MS/MS analysis

After loading into a reverse-phase trap column (Thermo Fisher Scientific, 100 m 2 cm) linked to a C18 RP analytical column (10 cm, ID75 μm, 3 μm resin), lyophilized peptides were resuspended in buffer A (0.1% FA). The tagged peptides were separated using an IntelliFlow-controlled linear gradient of buffer B (84% ACN and 0.1% FA) at a flow rate of 30 NL/min.

For LC-MS/MS analysis, we used a Q-Exactive mass spectrometer (Thermo Fisher Scientific) and an Easy nLC system. MS data were collected at 70,000 resolutions and 200 m/z in a scan range of 300–1,800 m/z in positive ion mode to detect intact peptides. The AGC goal was set at 1e6, the maximum inject time was 10 ms, and the dynamic exclusion duration was 40.0 s. In total, 20 MS2 scans were obtained based on the following settings to capture the mass-charge ratios of the polypeptide and polypeptide fragments for each entire scan: MS2 was activated with HCD, the isolation window was set to 2 m/z, the resolution of the HCD spectra was set to 17,500 at 200 m/z, the normalized collision energy was 30 eV, and the underfill ratio was 0.1%.

2.10. Protein identification and quantification

The raw data for each sample were processed using Proteome Discover software (version 1.4, Thermo Fisher Scientific) and the MASCOT engine (version 2.2, Matrix Science, London, UK) to match with the Uniport mouse database (“Swissprot_Mus_musculus_17063_20210106.fasta” downloaded from1 on January 6, 2021, and included 17,063 protein sequences). The following search parameters were entered: Mas missed cleavages: 2; peptide mass tolerance: ± 20 ppm; fragment mass tolerance: 0.1 Da; enzyme: Trypsin; Carbamidomethyl (C), TMT 6/10/16 plex (N-term), TMT 6/10/16 plex (K) are fixed modifications, and oxidation (M) is a variable modification. Decoy is a database pattern. Effective peptides had a false discovery rate of <0.01. Protein ratios were determined as the median of distinct peptides used to measure proteins. To account for experimental bias, all protein ratios were standardized using the mean protein ratio. The mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE partner repository with the dataset identifier PXD037294.

2.11. Western blot

On completing the sevoflurane treatment, mice were decapitated, and the cerebral cortex was extracted after short-term anesthesia with 3% sevoflurane for 5 min. RIPA buffer (Cat#: R0020, Solarbio, China) and protease inhibitors (Cat#: HY-K0010, MedChemExpress, China) were used for tissue lysis. The extracted proteins were examined to assess the expression of the following proteins and confirm proteomic data: chromogranin B (CHGB), secretogranin-2 (SCG2), phosphatase and tensin homolog (PTEN), microtubule-associated protein 2c (MAP2c), and mitochondrial superoxide dismutase 2 (MSOD2) (SOD2). The protein concentration was measured using a BCA protein assay kit (Cat#: CW0014S, CWBIO, China). Identical protein amounts were loaded onto 4–12% SDS- polyacrylamide gel electrophoresis gels (Cat#: M00652, Gennscript, China), and proteins were transferred to polyvinylidene fluoride membranes (Cat#: IPVH00010, Millipore, US) and blocked with SuperBlock (TBS) Blocking Buffer (Cat#:37536, Thermo Fisher Scientific, USA) for 30 min. Membranes were incubated with the following primary antibodies: CHGB (1:1000; Cat#: ab150354, Abcam, UK), SCG2 (1:800; Cat#: NO.20357-1-AP, ProteinTech, USA), PTEN (1:100; Santa Cruz Biotechnology, USA), MAP2 (1:1000; Cat#: NO. 17490-1-AP, Proteintech, USA), SCG2 (1:1000; Cat#: NO. 24127-1-AP, ProteinTech, USA), and GAPDH (1:5000; Cat#: T0004, Affinity Biosciences, USA) at 4°C overnight. After washing five times with TBST (1× Tris-buffered saline with 0.1% Tween-20), membranes were then incubated with the horseradish peroxidase (HRP)-conjugated goat anti-mouse (1:5000; Cat#: S0002 Affinity Biosciences, USA) or rabbit secondary antibody (1:5000; Cat#: S0001 Affinity Biosciences, USA) at room temperature for 1.5 h, following washing mentioned above. Finally, the protein bands were visualized with ECL solution, and after obtaining images, the primary and secondary antibodies of the membrane were stripped by western blot stripping buffer (Cat#: 21059, ThermoFisher Scientific, USA) for 30–60 min at 37°C, depending on antibody affinity. The next target protein was incubated on the stripped membrane with primary and secondary antibodies, as described previously. ImageJ2 was used to qualify the protein bands (version 2.3, National Institutes of Health, USA). The protein expression levels of CHGB, SCG2, MAP2c, PTEN, and SOD2 were normalized to GAPDH levels. The experiment was performed in triplicate.

2.12. Statistical analysis

Data analyses were performed using GraphPad Prism version 9.0 (GraphPad Software Inc., La Jolla, CA, USA). The results of biochemical experiments are presented as mean ± standard deviation (SD). Values of MWM escape latency are presented as the mean ± standard error of the mean (SEM), and platform crossing numbers are expressed as the median and interquartile range.

A normality test was used to determine whether data values were normally distributed. Two-way repeated-measures ANOVA was used to compare escape latency in behavioral data. The Mann-Whitney test was used to assess the number of platform crossings between the control and sevoflurane anesthesia groups. Two-way ANOVA was performed to examine the influence of age (6-day-old vs. 60-day-old), treatment (control vs. sevoflurane treatment), and the interaction between age and treatment on protein expression levels (CHGB, PTEN, MAP2c, and SOD2). One-way ANOVA was used to examine differences in the relative density of the proteins described above, as well as the density of dendritic spines. P < 0.05 was deemed as a statistically significant difference.

3. Results

3.1. Multiple sevoflurane inhalations induce future spatial learning and memory deficits in newborn but not in adult mice

Data on escape latency and platform crossing numbers were collected throughout the positional navigation training and spatial exploration assessments. Considering the escape latency in the positioning navigation stage, pubertal mice subjected to multiple 3% sevoflurane anesthesia throughout neonatal development exhibited impaired spatial learning (P < 0.05), with no statistical difference observed between the P60 + Control and P60 + Sevoflurane groups (Figure 2A). Furthermore, sevoflurane anesthesia decreased the platform crossing number of adolescent mice when compared with that of control mice (P < 0.05), with no notable difference observed in the adult groups (Figure 2B). These results suggested that multiple sevoflurane doses could impair the spatial learning and memory function of newborn mice during puberty, with no significant effect observed in adult mice.

Figure 2

Figure 2

Effects of multiple exposures to sevoflurane anesthesia to neonatal and adult mice on future spatial cognitive function in the test. (A) Swimming escape latency and (B) platform crossing number. n = 10 mice/group. Escape latency results are presented as mean ± standard error of the mean (SEM); the platform crossing number is expressed as median and interquartile range. *P < 0.05 vs. P6 + Control. MWM, Morris water maze; P6, postnatal day 6.

3.2. Changes in dendritic spine density in cerebral cortex

Based on Golgi-Cox staining of the cerebral cortex harvested 22 days post-treatment, pyramidal neurons in layer 4/5 of the P6+Sevoflurane group had a lower dendritic spine density than those of the P6+Control group; multiple sevoflurane exposures did not affect future dendritic spine density in adult mice. The above results were compatible with the behavioral test results (*P <0.05, P6 + Control, Figure 3).

Figure 3

Figure 3

The results of Golgi-Cox staining on the dendrites of pyramidal neurons of cerebral cortex in layers 4/5. (A) Representative photomicrographs of Golgi-Cox-stained dendrites (scale bar, 1 μm). (B) The dendritic spine density (numbers of dendritic spine/10 μm). n = 20 dendrites/mice. *P < 0.05 vs. P6 + Control. P6, postnatal day 6.

3.3. Protein quantitative characterization and DEP screening

A TMT-based quantitative proteomics technique was used to examine the cerebral cortex proteome of different groups. Our findings indicated that 6,861 proteins were discovered, with 6,247 proteins presenting quantitative values and annotation words. In the present study, proteins whose quantitative levels increased or decreased 1.2-fold were deemed DEPs.

Four groups were used for pairwise comparisons. DEPs derived from sevoflurane-induced neurotoxicity in newborn mice met at least one of three criteria: (1) in neonatal mice, sevoflurane caused the differential expression of proteins (DEPs in the P6 + Sevoflurane/P6 + Control), while age induced differential protein expression in control group mice (DEPs in the P60 + Control/P6 + Control). Discrepancies in DEP changes between the two groups implied that sevoflurane anesthesia might suppress age-induced DEPs, therefore promoting neurotoxic vulnerability in young mice (Table 1); (2) sevoflurane caused DEPs in newborn groups (DEPs in the P6 + Sevoflurane/P6 + Control), but age had no effect on the expression of these proteins in the sevoflurane treatment group (non-DEPs in the P60 + Sevoflurane/P6 + Sevoflurane). This finding suggests that these proteins could be intervention targets for sevoflurane-induced developmental neurotoxicity and are not associated with age. The therapeutic potential of these proteins could be exploited using selective inhibitors to prevent damage associated with multiple sevoflurane inhalations at a young age (Table 2); (3) Multiple sevoflurane inhalation induced statistically significant differences in protein expression in the neonatal group (DEPs in the P6 + Sevoflurane/P6 + Control), whereas age could also induce these proteins to produce significant differential expression in the sevoflurane group (DEPs in the P60 + Sevoflurane/P6 + Sevoflurane group). This finding revealed that targets of sevoflurane-induced neurotoxicity in neonatal mice matched those of age-dependent DEPs exposed to several sevoflurane doses (Table 3). Based on the above criteria, 443 proteins were filtered out to evaluate the potential mechanisms of sevoflurane-induced developmental neurotoxicity.

Table 1

Protein namesProteins IDsGene nameP6S/P6CPP60S/6SP
PhospholemmanQ9Z239Fxyd12.83P < 0.050.68P < 0.05
Intersectin-2Q9Z0R6Itsn21.41P < 0.050.69P < 0.05
NPC intracellular cholesterol transporter 2Q9Z0J0Npc20.78P < 0.051.22P < 0.05
A-kinase anchor protein 12Q9WTQ5Akap120.74P < 0.051.34P < 0.05
KH domain-containing, RNA-binding, signal transduction-associated protein 3Q9R226Khdrbs30.76P < 0.051.51P < 0.05
Serine racemaseQ9QZX7Srr1.30P < 0.050.66P < 0.05
Tubulin alpha-8 chainQ9JJZ2Tuba81.47P < 0.050.58P < 0.05
Transcription and mRNA export factor ENY2Q9JIX0Eny20.81P < 0.051.32P < 0.05
Fructosamine-3-kinaseQ9ER35Fn3k2.00P < 0.050.83P < 0.05
Transcription factor 20Q9EPQ8Tcf200.65P < 0.051.64P < 0.05
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrialQ9DCT2Ndufs31.59P < 0.050.83P < 0.05
Methyltransferase-like 26Q9DCS2Mettl261.22P < 0.050.69P < 0.05
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrialQ9DC69Ndufa91.67P < 0.050.83P < 0.05
Ubiquitin carboxyl-terminal hydrolase 12Q9D9M2Usp121.53P < 0.050.82P < 0.05
Synaptojanin-2-binding proteinQ9D6K5Synj2bp1.54P < 0.050.73P < 0.05
1-acyl-sn-glycerol-3-phosphate acyltransferase gammaQ9D517Agpat31.25P < 0.050.64P < 0.05
Protein tweety homolog 1Q9D3A9Ttyh11.88P < 0.050.82P < 0.05
Heterogeneous nuclear ribonucleoprotein A0Q9CX86Hnrnpa00.57P < 0.051.41P < 0.05
ATP synthase subunit s, mitochondrialQ9CRA7Dmac2l1.49P < 0.050.78P < 0.05
Josephin-2Q9CR30Josd22.44P < 0.050.75P < 0.05
Acetyl-coenzyme A transporter 1Q99J27Slc33a11.53P < 0.050.68P < 0.05
Calcium/calmodulin-dependent protein kinase type II subunit gammaQ923T9Camk2g1.45P < 0.050.83P < 0.05
ADP-ribose glycohydrolase MACROD1Q922B1Macrod11.28P < 0.050.80P < 0.05
Prostaglandin reductase 2Q8VDQ1Ptgr21.50P < 0.050.63P < 0.05
Small glutamine-rich tetratricopeptide repeat-containing protein betaQ8VD33Sgtb1.24P < 0.050.73P < 0.05
Cytochrome b-c1 complex subunit 9Q8R1I1Uqcr101.60P < 0.050.59P < 0.05
Synaptogyrin-3Q8R191Syngr31.31P < 0.050.68P < 0.05
ATP-binding cassette sub-family F member 3Q8K268Abcf30.82P < 0.051.53P < 0.05
COX assembly mitochondrial protein 2 homologQ8K199Cmc21.20P < 0.050.81P < 0.05
Zinc finger protein 536Q8K083Znf5360.52P < 0.051.60P < 0.05
Adhesion G protein-coupled receptor A1Q8C4G9Adgra11.42P < 0.050.60P < 0.05
Copine-1Q8C166Cpne11.29P < 0.050.81P < 0.05
Coronin-2AQ8C0P5Coro2a1.45P < 0.050.57P < 0.05
Choline transporter-like protein 2Q8BY89Slc44a21.24P < 0.050.79P < 0.05
Uncharacterized protein KIAA1671Q8BRV5Kiaa16711.45P < 0.050.81P < 0.05
Ubiquinone biosynthesis O-methyltransferase, mitochondrialQ8BMS4Coq31.43P < 0.050.75P < 0.05
PI-PLC X domain-containing protein 3Q8BLJ3Plcxd31.26P < 0.050.73P < 0.05
Serine/arginine-rich splicing factor 7Q8BL97Srsf70.63P < 0.051.21P < 0.05
Potassium voltage-gated channel subfamily F member 1Q7TSH7Kcnf11.46P < 0.050.71P < 0.05
MICOS complex subunit Mic10Q7TNS2Micos101.60P < 0.050.77P < 0.05
WD repeat-containing protein 43Q6ZQL4Wdr430.81P < 0.051.28P < 0.05
FK506-binding protein 15Q6P9Q6Fkbp150.83P < 0.051.21P < 0.05
Structure-specific endonuclease subunit SLX4Q6P1D7Slx40.76P < 0.051.30P < 0.05
Centrosomal protein of 170 kDaQ6A065Cep1700.74P < 0.051.21P < 0.05
Long-chain fatty acid transport protein 1Q60714Slc27a11.23P < 0.050.80P < 0.05
Laminin subunit alpha-2Q60675Lama21.29P < 0.050.67P < 0.05
Corticotropin-releasing factor-binding proteinQ60571Crhbp1.21P < 0.050.77P < 0.05
Leucine-rich repeat serine/threonine-protein kinase 2Q5S006Lrrk21.52P < 0.050.67P < 0.05
Extracellular serine/threonine protein kinase FAM20CQ5MJS3Fam20c0.74P < 0.051.25P < 0.05
Zinc transporter ZIP12Q5FWH7Slc39a121.26P < 0.050.65P < 0.05
Sodium channel subunit beta-2Q56A07Scn2b2.71P < 0.050.49P < 0.05
Optic atrophy 3 protein homologQ505D7Opa31.25P < 0.050.71P < 0.05
BMP/retinoic acid-inducible neural-specific protein 3Q499E0Brinp31.21P < 0.050.68P < 0.05
Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphataseQ3TWL2Pip4p11.33P < 0.050.74P < 0.05
Coiled-coil domain-containing protein 127Q3TC33Ccdc1271.49P < 0.050.72P < 0.05
Cyclin-dependent kinase 16Q04735Cdk161.41P < 0.050.71P < 0.05
Isochorismatase domain-containing protein 2AP85094Isoc2a2.13P < 0.050.74P < 0.05
Cellular retinoic acid-binding protein 1P62965Crabp10.67P < 0.051.34P < 0.05
Mitochondrial import inner membrane translocase subunit Tim13P62075Timm131.25P < 0.050.72P < 0.05
WolframinP56695Wfs11.44P < 0.050.68P < 0.05
Arylsulfatase AP50428Arsa1.23P < 0.050.77P < 0.05
Tropomodulin-1P49813Tmod12.07P < 0.050.64P < 0.05
Glutamate decarboxylase 1P48318Gad11.43P < 0.050.73P < 0.05
Ras-specific guanine nucleotide-releasing factor 1P27671Rasgrf11.33P < 0.050.67P < 0.05
Splicing factor U2AF 65 kDa subunitP26369U2af20.61P < 0.051.79P < 0.05
Gap junction alpha-1 proteinP23242Gja11.62P < 0.050.74P < 0.05
Cytochrome c oxidase subunit 7C, mitochondrialP17665Cox7c1.42P < 0.050.74P < 0.05
Integrin beta-2P11835Itgb21.61P < 0.050.52P < 0.05
Superoxide dismutase [Mn], mitochondrialP09671Sod21.59P < 0.050.74P < 0.05
Major prion proteinP04925Prnp1.42P < 0.050.76P < 0.05
NADH-ubiquinone oxidoreductase chain 4P03911Mtnd41.28P < 0.050.78P < 0.05
Protein WizO88286Wiz0.72P < 0.051.27P < 0.05
Transcription factor Sp3O70494Sp30.71P < 0.051.23P < 0.05
ATPase GET3O54984Get31.29P < 0.050.70P < 0.05
DnaJ homolog subfamily B member 6O54946Dnajb61.21P < 0.050.73P < 0.05
YjeF N-terminal domain-containing protein 3F6W8I0Yjefn31.78P < 0.050.70P < 0.05
Glutamate-rich protein 6D3Z6S9Erich61.34P < 0.050.76P < 0.05
Damage-control phosphatase ARMT1A6H630Armt11.48P < 0.050.79P < 0.05
Apical junction component 1 homologA2AJA9Ajm11.54P < 0.050.75P < 0.05
Oxysterol-binding protein-related protein 9A2A8Z1Osbpl90.79P < 0.051.29P < 0.05

List of the several sevoflurane-related significantly differential proteins in condition 1.

Table 2

Protein namesProteins IDsGene nameP6S/P6CPP60S/6SP
Oxysterol-binding protein-related protein 10S4R1M9Osbpl100.79P < 0.050.85P > 0.05
Protein sel-1 homolog 1Q9Z2G6Sel1l0.82P < 0.051.02P > 0.05
Protein fem-1 homolog A-AQ9Z2G1Fem1aa0.80P < 0.051.07P > 0.05
Disintegrin and metalloproteinase domain-containing protein 17Q9Z0F8Adam171.28P < 0.051.06P > 0.05
Beta-crystallin B1Q9WVJ5Crybb10.82P < 0.050.93P > 0.05
Ribosomal protein S6 kinase alpha-2Q9WUT3Rps6ka20.78P < 0.051.01P > 0.05
YLP motif-containing protein 1Q9R0I7Ylpm11.21P < 0.050.97P > 0.05
Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialQ9QZH6Ecsit0.81P < 0.050.99P > 0.05
DCN1-like protein 1Q9QZ73Dcun1d10.74P < 0.050.92P > 0.05
ProSAASQ9QXV0Pcsk1n1.20P < 0.051.06P > 0.05
Amyloid-beta A4 precursor protein-binding family B member 1Q9QXJ1Apbb11.41P < 0.050.90P > 0.05
Trafficking protein particle complex subunit 2-like proteinQ9JME7Trappc2l0.82P < 0.050.98P > 0.05
VPS10 domain-containing receptor SorCS1Q9JLC4Sorcs11.26P < 0.051.01P > 0.05
CCR4-NOT transcription complex subunit 9Q9JKY0Cnot90.81P < 0.050.92P > 0.05
Syntaxin-6Q9JKK1Stx60.77P < 0.050.89P > 0.05
Kv channel-interacting protein 2Q9JJ69Kcnip20.71P < 0.050.89P > 0.05
Coatomer subunit betaQ9JIF7Copb10.77P < 0.050.87P > 0.05
Progressive ankylosis proteinQ9JHZ2Ankh1.28P < 0.051.05P > 0.05
Transcription factor 20Q9EPQ8Tcf201.64P < 0.051.03P > 0.05
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1Q9EPQ2Rpgrip10.46P < 0.050.83P > 0.05
STARD3 N-terminal-like proteinQ9DCI3Stard3nl1.70P < 0.050.88P > 0.05
Protein-associating with the carboxyl-terminal domain of ezrinQ9DBQ7Scyl31.51P < 0.050.98P > 0.05
Vesicular integral-membrane protein VIP36Q9DBH5Lman20.80P < 0.050.81P > 0.05
Ubiquitin carboxyl-terminal hydrolase 12Q9D9M2Usp120.82P < 0.051.11P > 0.05
TP53-regulated inhibitor of apoptosis 1Q9D8Z2Triap10.74P < 0.050.85P > 0.05
SRA stem-loop-interacting RNA-binding protein, mitochondrialQ9D8T7Slirp0.75P < 0.050.92P > 0.05
Protein FAM241BQ9D882Fam241b1.32P < 0.050.96P > 0.05
Protein FAM162AQ9D6U8Fam162a0.73P < 0.050.91P > 0.05
Clavesin-1Q9D4C9Clvs10.80P < 0.051.02P > 0.05
Epoxide hydrolase 1Q9D379Ephx10.71P < 0.050.96P > 0.05
ArpinQ9D0A3Arpin1.37P < 0.050.93P > 0.05
Ras-related protein Rab-3BQ9CZT8Rab3b0.82P < 0.050.86P > 0.05
Succinate dehydrogenase cytochrome b560 subunit, mitochondrialQ9CZB0Sdhc0.78P < 0.050.92P > 0.05
Probable ATP-dependent RNA helicase DDX47Q9CWX9Ddx471.32P < 0.050.99P > 0.05
ATP synthase subunit s, mitochondrialQ9CRA7Dmac2l0.78P < 0.050.96P > 0.05
Calcium-regulated heat stable protein 1Q9CR86Carhsp11.48P < 0.051.01P > 0.05
Transmembrane protein 33Q9CR67Tmem330.63P < 0.050.97P > 0.05
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferaseQ9CQF6Aasdhppt0.55P < 0.050.82P > 0.05
Ubiquilin-4Q99NB8Ubqln41.57P < 0.050.94P > 0.05
39S ribosomal protein L9, mitochondrialQ99N94Mrpl91.65P < 0.051.08P > 0.05
39S ribosomal protein L16, mitochondrialQ99N93Mrpl160.77P < 0.050.87P > 0.05
RING finger protein 141Q99MB7Rnf1410.81P < 0.050.93P > 0.05
CDK5 regulatory subunit-associated protein 3Q99LM2Cdk5rap32.06P < 0.051.15P > 0.05
Chloride channel CLIC-like protein 1Q99LI2Clcc11.35P < 0.050.94P > 0.05
Ras-related GTP-binding protein CQ99K70Rragc0.80P < 0.050.86P > 0.05
AlsinQ920R0Als20.83P < 0.050.93P > 0.05
GTP-binding protein Di-Ras1Q91Z61Diras10.80P < 0.051.00P > 0.05
Thymocyte nuclear protein 1Q91YJ3Thyn10.76P < 0.050.83P > 0.05
Oxysterol-binding protein-related protein 1Q91XL9Osbpl1a0.78P < 0.050.88P > 0.05
SNF-related serine/threonine-protein kinaseQ8VDU5Snrk1.21P < 0.051.03P > 0.05
Small glutamine-rich tetratricopeptide repeat-containing protein betaQ8VD33Sgtb0.73P < 0.050.88P > 0.05
Alpha/beta hydrolase domain-containing protein 17CQ8VCV1Abhd17c0.82P < 0.050.93P > 0.05
UBX domain-containing protein 4Q8VCH8Ubxn41.55P < 0.050.93P > 0.05
Netrin-G1Q8R4G0Ntng10.72P < 0.050.84P > 0.05
COMM domain-containing protein 5Q8R395Commd50.66P < 0.051.12P > 0.05
Rab11 family-interacting protein 5Q8R361Rab11fip51.24P < 0.051.01P > 0.05
Synaptogyrin-3Q8R191Syngr30.68P < 0.050.87P > 0.05
OptineurinQ8K3K8Optn0.72P < 0.050.95P > 0.05
Netrin receptor UNC5AQ8K1S4Unc5a1.78P < 0.051.02P > 0.05
COMM domain-containing protein 10Q8JZY2Commd101.27P < 0.051.07P > 0.05
Long-chain-fatty-acid–CoA ligase 5Q8JZR0Acsl50.78P < 0.050.86P > 0.05
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1Q8CF89Tab10.71P < 0.051.05P > 0.05
von Willebrand factor A domain-containing protein 8Q8CC88Vwa80.80P < 0.051.08P > 0.05
ConsortinQ8CBC4Cnst0.71P < 0.050.86P > 0.05
Prenylcysteine oxidase-likeQ8C7K6Pcyox1l1.23P < 0.051.00P > 0.05
RNA-binding protein 14Q8C2Q3Rbm141.20P < 0.050.95P > 0.05
Copine-1Q8C166Cpne10.81P < 0.050.98P > 0.05
Autophagy-related protein 16-1Q8C0J2Atg16l10.83P < 0.050.97P > 0.05
Pogo transposable element with ZNF domainQ8BZH4Pogz1.21P < 0.050.95P > 0.05
Calcium/calmodulin-dependent protein kinase type 1DQ8BW96Camk1d0.80P < 0.050.90P > 0.05
Uncharacterized protein KIAA1671Q8BRV5Kiaa16710.81P < 0.051.19P > 0.05
Paralemmin-2Q8BR92Palm21.24P < 0.051.06P > 0.05
IQ calmodulin-binding motif-containing protein 1Q8BP00Iqcb10.77P < 0.051.04P > 0.05
PI-PLC X domain-containing protein 3Q8BLJ3Plcxd30.73P < 0.050.89P > 0.05
RNA binding protein fox-1 homolog 3Q8BIF2Rbfox30.75P < 0.050.81P > 0.05
Atlastin-1Q8BH66Atl10.83P < 0.050.97P > 0.05
Enolase-phosphatase E1Q8BGB7Enoph10.83P < 0.050.90P > 0.05
Protein ZNF365Q8BG89Znf3650.71P < 0.050.97P > 0.05
Coiled-coil domain-containing protein 50Q810U5Ccdc500.72P < 0.050.81P > 0.05
Tetratricopeptide repeat protein 9CQ810A3Ttc9c0.75P < 0.050.99P > 0.05
Sperm-associated antigen 1Q80ZX8Spag11.75P < 0.050.99P > 0.05
Death-associated protein kinase 1Q80YE7Dapk10.75P < 0.051.04P > 0.05
Rabenosyn-5Q80Y56Rbsn0.77P < 0.050.82P > 0.05
MICOS complex subunit Mic10Q7TNS2Micos100.77P < 0.051.20P > 0.05
L-fucose kinaseQ7TMC8Fcsk0.70P < 0.050.97P > 0.05
Small integral membrane protein 12Q78RX3Smim120.68P < 0.050.85P > 0.05
T-lymphoma invasion and metastasis-inducing protein 2Q6ZPF3Tiam21.33P < 0.051.07P > 0.05
Diacylglycerol lipase-alphaQ6WQJ1Dagla0.78P < 0.051.14P > 0.05
WASH complex subunit 2Q6PGL7Washc21.50P < 0.050.96P > 0.05
Palmitoyl-protein thioesterase ABHD10, mitochondrialQ6PE15Abhd100.81P < 0.050.83P > 0.05
Myogenesis-regulating glycosidaseQ69ZQ1Myorg1.27P < 0.051.00P > 0.05
Serine/threonine-protein kinase BRSK2Q69Z98Brsk21.25P < 0.050.89P > 0.05
Apoptosis-stimulating of p53 protein 1Q62415Ppp1r13b0.76P < 0.050.98P > 0.05
Macrophage mannose receptor 1Q61830Mrc10.73P < 0.050.81P > 0.05
Zinc finger protein 638Q61464Znf6381.21P < 0.050.92P > 0.05
Immunoglobulin-binding protein 1Q61249Igbp11.23P < 0.050.94P > 0.05
Dual specificity tyrosine-phosphorylation-regulated kinase 1AQ61214Dyrk1a1.26P < 0.051.06P > 0.05
ELAV-like protein 2Q60899Elavl22.20P < 0.051.20P > 0.05
Long-chain fatty acid transport protein 1Q60714Slc27a10.80P < 0.051.06P > 0.05
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1Q60710Samhd11.71P < 0.051.01P > 0.05
Laminin subunit alpha-2Q60675Lama20.67P < 0.050.98P > 0.05
Corticotropin-releasing factor-binding proteinQ60571Crhbp0.77P < 0.050.95P > 0.05
Protein jagunal homolog 1Q5XKN4Jagn10.66P < 0.050.91P > 0.05
WD repeat-containing protein 81Q5ND34Wdr810.76P < 0.050.97P > 0.05
Extracellular serine/threonine protein kinase FAM20CQ5MJS3Fam20c1.25P < 0.050.97P > 0.05
Epimerase family protein SDR39U1Q5M8N4Sdr39u10.71P < 0.051.05P > 0.05
Volume-regulated anion channel subunit LRRC8BQ5DU41Lrrc8b1.35P < 0.050.94P > 0.05
Optic atrophy 3 protein homologQ505D7Opa30.71P < 0.050.96P > 0.05
Testis-expressed protein 10Q3URQ0Tex101.60P < 0.050.95P > 0.05
G protein-regulated inducer of neurite outgrowth 1Q3UNH4Gprin11.23P < 0.051.02P > 0.05
Glucose-fructose oxidoreductase domain-containing protein 1Q3UHD2Gfod10.81P < 0.051.09P > 0.05
Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphataseQ3TWL2Pip4p10.74P < 0.050.92P > 0.05
Keratin, type II cytoskeletal 2 epidermalQ3TTY5Krt20.76P < 0.050.83P > 0.05
Patatin-like phospholipase domain-containing protein 6Q3TRM4Pnpla60.74P < 0.050.97P > 0.05
Coiled-coil domain-containing protein 127Q3TC33Ccdc1270.72P < 0.051.13P > 0.05
Mitogen-activated protein kinase kinase kinase 13Q1HKZ5Map3k130.69P < 0.050.98P > 0.05
Insulin-like growth factor-binding protein 5Q07079Igfbp51.22P < 0.050.86P > 0.05
Glutamate receptor ionotropic, NMDA 2DQ03391Grin2d0.62P < 0.050.94P > 0.05
Junction plakoglobinQ02257Jup0.82P < 0.050.93P > 0.05
Peroxiredoxin-5, mitochondrialP99029Prdx51.22P < 0.050.93P > 0.05
Amyloid-beta A4 precursor protein-binding family A member 2P98084Apba21.34P < 0.050.91P > 0.05
Adenylate cyclase type 8P97490Adcy80.60P < 0.050.89P > 0.05
Eukaryotic translation initiation factor 4E-binding protein 2P70445Eif4ebp21.21P < 0.051.02P > 0.05
Pituitary adenylate cyclase-activating polypeptide type I receptorP70205Adcyap1r11.52P < 0.051.01P > 0.05
Ran-binding protein 9P69566Ranbp90.79P < 0.050.93P > 0.05
SUMO-conjugating enzyme UBC9P63280Ube2i0.76P < 0.050.93P > 0.05
Mitochondrial import inner membrane translocase subunit Tim13P62075Timm130.72P < 0.050.98P > 0.05
AP-1 complex subunit sigma-1AP61967Ap1s10.80P < 0.050.91P > 0.05
Nuclear protein localization protein 4 homologP60670Nploc41.37P < 0.051.11P > 0.05
Ubiquitin carboxyl-terminal hydrolase 25P57080Usp250.68P < 0.050.92P > 0.05
WolframinP56695Wfs10.68P < 0.051.08P > 0.05
Protoporphyrinogen oxidaseP51175Ppox0.81P < 0.050.82P > 0.05
CalpastatinP51125Cast1.24P < 0.051.09P > 0.05
Arylsulfatase AP50428Arsa0.77P < 0.050.97P > 0.05
Hematopoietic lineage cell-specific proteinP49710Hcls10.77P < 0.051.02P > 0.05
Signal transducer and activator of transcription 3P42227Stat30.79P < 0.050.97P > 0.05
RadixinP26043Rdx1.33P < 0.051.10P > 0.05
Lysosomal acid phosphataseP24638Acp20.78P < 0.050.91P > 0.05
Cytochrome P450 2D11P24457Cyp2d111.93P < 0.051.09P > 0.05
Microtubule-associated protein 2P20357Map21.22P < 0.051.06P > 0.05
Secretogranin-1P16014Chgb1.38P < 0.051.02P > 0.05
DystrophinP11531Dmd0.79P < 0.050.82P > 0.05
Complement factor HP06909Cfh1.36P < 0.051.14P > 0.05
Major prion proteinP04925Prnp0.76P < 0.051.00P > 0.05
Serine/threonine-protein kinase A-RafP04627Araf0.75P < 0.051.00P > 0.05
Keratin, type II cytoskeletal 1P04104Krt10.73P < 0.051.17P > 0.05
NADH-ubiquinone oxidoreductase chain 4P03911Mtnd40.78P < 0.050.94P > 0.05
AfaminO89020Afm1.26P < 0.050.81P > 0.05
Sortilin-related receptorO88307Sorl10.68P < 0.050.80P > 0.05
Protein WizO88286Wiz1.27P < 0.051.03P > 0.05
Protein tyrosine phosphatase type IVA 2O70274Ptp4a20.73P < 0.050.95P > 0.05
ATPase GET3O54984Get30.70P < 0.050.98P > 0.05
Caveolae-associated protein 1O54724Cavin10.78P < 0.050.86P > 0.05
Sialidase-1O35657Neu11.35P < 0.051.06P > 0.05
Glutamate carboxypeptidase 2O35409Folh12.18P < 0.051.06P > 0.05
3-hydroxyacyl-CoA dehydrogenase type-2O08756Hsd17b100.78P < 0.050.90P > 0.05
DNA-directed RNA polymerase II subunit RPB11O08740Polr2j1.65P < 0.050.94P > 0.05
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTENO08586Pten1.30P < 0.051.00P > 0.05
Rab11 family-interacting protein 2G3XA57Rab11fip20.69P < 0.051.03P > 0.05
Glutamate-rich protein 6D3Z6S9Erich60.76P < 0.051.15P > 0.05
Ryanodine receptor 3A2AGL3Ryr30.66P < 0.050.86P > 0.05

List of the several sevoflurane-related significantly differential proteins in condition 2.

Table 3

Protein namesProteins IDsGene nameP6S/6CPP60S/P6SP
Retinaldehyde-binding protein 1Q9Z275Rlbp10.61P < 0.050.49P < 0.05
PhospholemmanQ9Z239Fxyd10.68P < 0.054.96P < 0.05
NPC intracellular cholesterol transporter 2Q9Z0J0Npc21.22P < 0.050.78P < 0.05
Histone-arginine methyltransferase CARM1Q9WVG6Carm10.83P < 0.050.75P < 0.05
RanBP-type and C3HC4-type zinc finger-containing protein 1Q9WUB0Rbck11.30P < 0.051.25P < 0.05
Prefoldin subunit 5Q9WU28Pfdn50.72P < 0.050.61P < 0.05
V-type proton ATPase subunit G 2Q9WTT4Atp6v1g21.41P < 0.052.48P < 0.05
Mitochondrial import inner membrane translocase subunit Tim23Q9WTQ8Timm230.78P < 0.050.71P < 0.05
A-kinase anchor protein 12Q9WTQ5Akap121.34P < 0.050.70P < 0.05
V-type proton ATPase subunit S1Q9R1Q9Atp6ap10.67P < 0.050.61P < 0.05
Diacylglycerol kinase epsilonQ9R1C6Dgke0.82P < 0.051.21P < 0.05
Synaptotagmin-11Q9R0N3Syt110.82P < 0.050.69P < 0.05
Zinc finger E-box-binding homeobox 2Q9R0G7Zeb20.80P < 0.050.72P < 0.05
Serine racemaseQ9QZX7Srr0.66P < 0.051.64P < 0.05
DnaJ homolog subfamily A member 2Q9QYJ0Dnaja20.78P < 0.050.75P < 0.05
Activating signal cointegrator 1Q9QXN3Trip40.82P < 0.050.80P < 0.05
Alpha-N-acetylgalactosaminidaseQ9QWR8Naga0.71P < 0.050.49P < 0.05
Tubulin alpha-8 chainQ9JJZ2Tuba80.58P < 0.052.02P < 0.05
Phosphorylated adapter RNA export proteinQ9JJT9Phax0.82P < 0.050.71P < 0.05
Ribosomal oxygenase 1Q9JJF3Riox10.81P < 0.050.79P < 0.05
Transcription and mRNA export factor ENY2Q9JIX0Eny21.32P < 0.050.69P < 0.05
Solute carrier family 12 member 4Q9JIS8Slc12a41.26P < 0.051.21P < 0.05
Protein arginine N-methyltransferase 1Q9JIF0Prmt10.82P < 0.050.60P < 0.05
PalmdelphinQ9JHU2Palmd0.55P < 0.050.71P < 0.05
Acidic leucine-rich nuclear phosphoprotein 32 family member BQ9EST5Anp32b0.81P < 0.050.63P < 0.05
Tuftelin-interacting protein 11Q9ERA6Tfip110.77P < 0.050.65P < 0.05
Fructosamine-3-kinaseQ9ER35Fn3k0.83P < 0.051.88P < 0.05
Regulating synaptic membrane exocytosis protein 2Q9EQZ7Rims21.30P < 0.051.47P < 0.05
39S ribosomal protein L46, mitochondrialQ9EQI8Mrpl460.67P < 0.050.53P < 0.05
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrialQ9DCT2Ndufs30.83P < 0.051.48P < 0.05
Methyltransferase-like 26Q9DCS2Mettl260.69P < 0.052.42P < 0.05
Eukaryotic translation initiation factor 3 subunit FQ9DCH4Eif3f0.74P < 0.050.82P < 0.05
28S ribosomal protein S11, mitochondrialQ9DCA2Mrps110.81P < 0.050.68P < 0.05
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrialQ9DC69Ndufa90.83P < 0.051.47P < 0.05
Cytochrome P450 2S1Q9DBX6Cyp2s10.74P < 0.050.80P < 0.05
Protein phosphatase 1 regulatory subunit 12AQ9DBR7Ppp1r12a1.29P < 0.051.54P < 0.05
Alpha-aminoadipic semialdehyde dehydrogenaseQ9DBF1Aldh7a10.77P < 0.051.31P < 0.05
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1Q9DBC3Cmtr10.83P < 0.050.80P < 0.05
Calponin-3Q9DAW9Cnn31.33P < 0.050.70P < 0.05
Glycine amidinotransferase, mitochondrialQ9D964Gatm0.80P < 0.050.70P < 0.05
Signal peptidase complex catalytic subunit SEC11CQ9D8V7Sec11c0.83P < 0.050.68P < 0.05
DENN domain-containing protein 10Q9D8N2Dennd100.64P < 0.050.40P < 0.05
Splicing factor U2AF 35 kDa subunitQ9D883U2af10.73P < 0.050.40P < 0.05
EEF1A lysine methyltransferase 2Q9D853Eef1akmt21.33P < 0.051.29P < 0.05
Phospholysine phosphohistidine inorganic pyrophosphate phosphataseQ9D7I5Lhpp0.68P < 0.050.64P < 0.05
Ribose-phosphate pyrophosphokinase 1Q9D7G0Prps10.78P < 0.051.38P < 0.05
Isobutyryl-CoA dehydrogenase, mitochondrialQ9D7B6Acad80.81P < 0.051.30P < 0.05
Synaptojanin-2-binding proteinQ9D6K5Synj2bp0.73P < 0.051.73P < 0.05
PHD finger protein 6Q9D4J7Phf60.75P < 0.050.56P < 0.05
Protein tweety homolog 1Q9D3A9Ttyh10.82P < 0.051.69P < 0.05
ADP-ribosylation factor-like protein 2-binding proteinQ9D385Arl2bp0.78P < 0.050.51P < 0.05
28S ribosomal protein S25, mitochondrialQ9D125Mrps250.67P < 0.050.51P < 0.05
5-methylcytosine rRNA methyltransferase NSUN4Q9CZ57Nsun40.81P < 0.050.82P < 0.05
Peroxiredoxin-like 2AQ9CYH2Prxl2a0.75P < 0.050.77P < 0.05
Heterogeneous nuclear ribonucleoprotein A0Q9CX86Hnrnpa01.41P < 0.050.71P < 0.05
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4Q9CWW6Pin40.76P < 0.050.51P < 0.05
Mitochondrial fission process protein 1Q9CRB8Mtfp11.29P < 0.051.69P < 0.05
Methylsterol monooxygenase 1Q9CRA4Msmo10.64P < 0.050.49P < 0.05
Josephin-2Q9CR30Josd20.75P < 0.051.52P < 0.05
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6Q9CQZ5Ndufa61.28P < 0.051.59P < 0.05
Protein RER1Q9CQU3Rer10.70P < 0.050.57P < 0.05
Thioredoxin domain-containing protein 12Q9CQU0Txndc120.75P < 0.050.56P < 0.05
Protein transport protein Sec61 subunit betaQ9CQS8Sec61b0.58P < 0.050.38P < 0.05
Solute carrier family 25 member 46Q9CQS4Slc25a460.81P < 0.051.38P < 0.05
Coactosin-like proteinQ9CQI6Cotl10.80P < 0.050.54P < 0.05
CDGSH iron-sulfur domain-containing protein 2Q9CQB5Cisd20.81P < 0.050.81P < 0.05
39S ribosomal protein L49, mitochondrialQ9CQ40Mrpl490.79P < 0.050.70P < 0.05
EKC/KEOPS complex subunit Tp53rkQ99PW4Tp53rk0.67P < 0.050.33P < 0.05
Long-chain-fatty-acid–CoA ligase ACSBG1Q99PU5Acsbg11.22P < 0.051.32P < 0.05
Tripartite motif-containing protein 12AQ99PQ1Trim12a1.29P < 0.050.70P < 0.05
Acyl-CoA desaturase 3Q99PL7Scd30.71P < 0.050.67P < 0.05
RAF proto-oncogene serine/threonine-protein kinaseQ99N57Raf11.43P < 0.051.44P < 0.05
BRCA1-associated proteinQ99MP8Brap0.82P < 0.050.70P < 0.05
Protein dpy-30 homologQ99LT0Dpy300.76P < 0.050.42P < 0.05
Translation initiation factor eIF-2B subunit betaQ99LD9Eif2b20.64P < 0.050.39P < 0.05
ER membrane protein complex subunit 3Q99KI3Emc30.81P < 0.050.73P < 0.05
Ubiquitin carboxyl-terminal hydrolase 11Q99K46Usp111.31P < 0.050.81P < 0.05
Diphosphomevalonate decarboxylaseQ99JF5Mvd0.75P < 0.050.33P < 0.05
G-protein coupled receptor family C group 5 member BQ923Z0Gprc5b1.26P < 0.051.25P < 0.05
Calcium/calmodulin-dependent protein kinase type II subunit gammaQ923T9Camk2g0.83P < 0.051.35P < 0.05
tRNA modification GTPase GTPBP3, mitochondrialQ923K4Gtpbp31.57P < 0.050.68P < 0.05
Protein arginine N-methyltransferase 3Q922H1Prmt30.78P < 0.051.33P < 0.05
ADP-ribose glycohydrolase MACROD1Q922B1Macrod10.80P < 0.051.31P < 0.05
Gap junction gamma-3 proteinQ921C1Gjc32.02P < 0.052.61P < 0.05
Vang-like protein 2Q91ZD4Vangl20.81P < 0.050.64P < 0.05
Egl nine homolog 1Q91YE3Egln10.82P < 0.050.57P < 0.05
ATP-dependent DNA helicase Q5Q8VID5Recql50.70P < 0.050.42P < 0.05
Voltage-dependent calcium channel gamma-8 subunitQ8VHW2Cacng81.21P < 0.051.74P < 0.05
Transcription initiation factor TFIID subunit 12Q8VE65Taf120.56P < 0.050.30P < 0.05
Ganglioside-induced differentiation-associated protein 1-like 1Q8VE33Gdap1l10.81P < 0.050.73P < 0.05
Purine-rich element-binding protein gammaQ8R4E6Purg0.80P < 0.050.78P < 0.05
Heparan sulfate 2-O-sulfotransferase 1Q8R3H7Hs2st10.81P < 0.050.58P < 0.05
Protein C1orf43 homologQ8R0920.75P < 0.050.77P < 0.05
Complement C1q tumor necrosis factor-related protein 4Q8R066C1qtnf40.75P < 0.050.66P < 0.05
Microtubule-associated protein RP/EB family member 2Q8R001Mapre20.83P < 0.050.74P < 0.05
Protein LZICQ8K3C3Lzic0.74P < 0.050.43P < 0.05
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3Q8K2C9Hacd30.77P < 0.050.69P < 0.05
Membrane magnesium transporter 1Q8K273Mmgt10.77P < 0.050.62P < 0.05
COX assembly mitochondrial protein 2 homologQ8K199Cmc20.81P < 0.051.28P < 0.05
Hydroxymethylglutaryl-CoA synthase, cytoplasmicQ8JZK9Hmgcs10.76P < 0.050.39P < 0.05
DNA polymerase thetaQ8CGS6Polq0.82P < 0.051.83P < 0.05
Guanine nucleotide-binding protein G(olf) subunit alphaQ8CGK7Gnal1.55P < 0.052.59P < 0.05
Retinol dehydrogenase 13Q8CEE7Rdh130.60P < 0.050.33P < 0.05
Septin-10Q8C650Septin100.47P < 0.050.22P < 0.05
Calmodulin-regulated spectrin-associated protein 2Q8C1B1Camsap20.77P < 0.050.74P < 0.05
Rho-related GTP-binding protein RhoFQ8BYP3Rhof0.73P < 0.050.48P < 0.05
Choline transporter-like protein 2Q8BY89Slc44a20.79P < 0.051.41P < 0.05
Ethanolamine-phosphate phospho-lyaseQ8BWU8Etnppl1.33P < 0.051.80P < 0.05
Gamma-secretase subunit APH-1AQ8BVF7Aph1a0.79P < 0.050.31P < 0.05
Lipid droplet-associated hydrolaseQ8BVA5Ldah0.62P < 0.050.48P < 0.05
Ubiquitin carboxyl-terminal hydrolase 43Q8BUM9Usp430.82P < 0.050.70P < 0.05
Cilia- and flagella-associated protein 20Q8BTU1Cfap200.81P < 0.050.54P < 0.05
Inactive C-alpha-formylglycine-generating enzyme 2Q8BPG6Sumf20.82P < 0.051.46P < 0.05
Protein DPCDQ8BPA8Dpcd0.67P < 0.050.34P < 0.05
Protein FRA10AC1 homologQ8BP78Fra10ac10.81P < 0.050.80P < 0.05
Lysophosphatidic acid phosphatase type 6Q8BP40Acp61.55P < 0.051.46P < 0.05
Ubiquinone biosynthesis O-methyltransferase, mitochondrialQ8BMS4Coq30.75P < 0.051.84P < 0.05
Eukaryotic translation initiation factor 4E type 2Q8BMB3Eif4e21.43P < 0.050.53P < 0.05
Heat shock 70 kDa protein 13Q8BM72Hspa130.70P < 0.050.64P < 0.05
Serine/arginine-rich splicing factor 7Q8BL97Srsf71.21P < 0.050.65P < 0.05
Serine/threonine-protein kinase SMG1Q8BKX6Smg11.65P < 0.050.56P < 0.05
Pumilio homolog 3Q8BKS9Pum30.75P < 0.050.69P < 0.05
Zinc finger CCCH domain-containing protein 14Q8BJ05Zc3h140.18P < 0.050.60P < 0.05
TBC1 domain family member 10BQ8BHL3Tbc1d10b1.21P < 0.051.28P < 0.05
Probable asparagine–tRNA ligase, mitochondrialQ8BGV0Nars20.70P < 0.050.60P < 0.05
NIPA-like protein 3Q8BGN5Nipal30.69P < 0.052.19P < 0.05
Glycerophosphocholine cholinephosphodiesterase ENPP6Q8BGN3Enpp61.77P < 0.052.12P < 0.05
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoformQ8BG02Ppp2r2c0.77P < 0.050.65P < 0.05
Beta-actin-like protein 2Q8BFZ3Actbl21.31P < 0.050.69P < 0.05
WD repeat-containing protein 82Q8BFQ4Wdr820.83P < 0.050.66P < 0.05
Mitofusin-1Q811U4Mfn10.82P < 0.050.78P < 0.05
U3 small nucleolar ribonucleoprotein protein MPP10Q810V0Mphosph100.73P < 0.050.37P < 0.05
28S ribosomal protein S10, mitochondrialQ80ZK0Mrps100.72P < 0.050.76P < 0.05
Sorting nexin-32Q80ZJ7Snx320.82P < 0.050.80P < 0.05
MyomegalinQ80YT7Pde4dip0.81P < 0.050.44P < 0.05
Serine/threonine-protein phosphatase 1 regulatory subunit 10Q80W00Ppp1r100.59P < 0.050.41P < 0.05
Aldehyde dehydrogenase family 3 member B1Q80VQ0Aldh3b11.47P < 0.051.79P < 0.05
Tectonin beta-propeller repeat-containing protein 1Q80VP0Tecpr11.22P < 0.051.31P < 0.05
Sodium-dependent phosphate transporter 2Q80UP8Slc20a21.85P < 0.051.52P < 0.05
Ubiquitin-protein ligase E3CQ80U95Ube3c0.83P < 0.050.83P < 0.05
Cullin-9Q80TT8Cul91.29P < 0.050.73P < 0.05
DnaJ homolog subfamily C member 16Q80TN4Dnajc160.75P < 0.050.67P < 0.05
NischarinQ80TM9Nisch1.21P < 0.051.29P < 0.05
Leucine-rich repeat and fibronectin type-III domain-containing protein 2Q80TG9Lrfn20.71P < 0.050.72P < 0.05
Synaptic vesicle membrane protein VAT-1 homolog-likeQ80TB8Vat1l1.22P < 0.051.34P < 0.05
CUB and sushi domain-containing protein 3Q80T79Csmd30.69P < 0.050.36P < 0.05
Pleckstrin homology domain-containing family A member 6Q7TQG1Plekha61.27P < 0.051.35P < 0.05
Tubulin polymerization-promoting proteinQ7TQD2Tppp1.24P < 0.052.68P < 0.05
Nucleosome assembly protein 1-like 4Q78ZA7Nap1l40.83P < 0.050.66P < 0.05
Purkinje cell protein 4-like protein 1Q6W8Q3Pcp4l11.20P < 0.052.61P < 0.05
F-box only protein 42Q6PDJ6Fbxo421.64P < 0.051.61P < 0.05
Armadillo-like helical domain-containing protein 3Q6PD19Armh30.81P < 0.050.78P < 0.05
Inositol hexakisphosphate kinase 1Q6PD10Ip6k10.77P < 0.050.71P < 0.05
Protein MTSS 2Q6P9S0Mtss21.31P < 0.051.28P < 0.05
FK506-binding protein 15Q6P9Q6Fkbp151.21P < 0.050.75P < 0.05
Structure-specific endonuclease subunit SLX4Q6P1D7Slx41.30P < 0.050.41P < 0.05
PILR alpha-associated neural proteinQ6P1B3Pianp1.51P < 0.051.70P < 0.05
Rho GTPase-activating protein 21Q6DFV3Arhgap210.82P < 0.051.26P < 0.05
SID1 transmembrane family member 1Q6AXF6Sidt11.31P < 0.051.50P < 0.05
Centrosomal protein of 170 kDaQ6A065Cep1701.21P < 0.050.74P < 0.05
Pre-mRNA-splicing factor ISY1 homologQ69ZQ2Isy10.80P < 0.050.69P < 0.05
COMM domain-containing protein 3Q63829Commd30.83P < 0.050.80P < 0.05
Tumor protein D52Q62393Tpd521.44P < 0.051.33P < 0.05
Replication protein A 32 kDa subunitQ62193Rpa20.71P < 0.050.54P < 0.05
Translocon-associated protein subunit deltaQ62186Ssr41.35P < 0.050.74P < 0.05
DystroglycanQ62165Dag10.83P < 0.050.70P < 0.05
Serum paraoxonase/arylesterase 2Q62086Pon20.49P < 0.050.25P < 0.05
28S ribosomal protein S31, mitochondrialQ61733Mrps310.74P < 0.050.77P < 0.05
Inter-alpha-trypsin inhibitor heavy chain H2Q61703Itih20.82P < 0.050.77P < 0.05
E3 ubiquitin/ISG15 ligase TRIM25Q61510Trim250.69P < 0.050.68P < 0.05
Protein phosphatase 1 regulatory subunit 1BQ60829Ppp1r1b1.48P < 0.052.61P < 0.05
RAC-beta serine/threonine-protein kinaseQ60823Akt20.65P < 0.050.49P < 0.05
Src substrate cortactinQ60598Cttn1.31P < 0.051.46P < 0.05
G-protein coupled receptor-associated sorting protein 1Q5U4C1Gprasp11.25P < 0.050.73P < 0.05
DBF4-type zinc finger-containing protein 2 homologQ5SS00Zdbf20.58P < 0.050.22P < 0.05
Echinoderm microtubule-associated protein-like 6Q5SQM0Eml60.72P < 0.051.68P < 0.05
RNA-binding protein 27Q5SFM8Rbm271.50P < 0.050.76P < 0.05
Capping protein inhibiting regulator of actin dynamicsQ5PR69Crad0.82P < 0.050.51P < 0.05
Neuralized-like protein 4Q5NCX5Neurl40.65P < 0.050.54P < 0.05
Sodium channel subunit beta-2Q56A07Scn2b0.49P < 0.054.21P < 0.05
Capping protein, Arp2/3 and myosin-I linker protein 2Q3V3V9Carmil21.22P < 0.051.76P < 0.05
Transmembrane protein 237Q3V0J1Tmem2370.60P < 0.050.62P < 0.05
Tau-tubulin kinase 2Q3UVR3Ttbk20.74P < 0.050.67P < 0.05
Protein FAM91A1Q3UVG3Fam91a10.77P < 0.050.75P < 0.05
Methyltransferase-like protein 17, mitochondrialQ3U2U7Mettl171.41P < 0.051.45P < 0.05
Ubiquitin-conjugating enzyme E2 variant 3Q3U1V6Uevld0.74P < 0.050.77P < 0.05
UDP-N-acetylhexosamine pyrophosphorylase-like protein 1Q3TW96Uap1l11.25P < 0.051.24P < 0.05
NLR family member X1Q3TL44Nlrx10.76P < 0.051.46P < 0.05
Son of sevenless homolog 2Q02384Sos20.76P < 0.050.43P < 0.05
Nucleoside diphosphate kinase BQ01768Nme20.79P < 0.050.52P < 0.05
Proteasome subunit beta type-4P99026Psmb40.80P < 0.050.82P < 0.05
Phosphatidate cytidylyltransferase 1P98191Cds10.58P < 0.050.50P < 0.05
40S ribosomal protein S5P97461Rps50.83P < 0.050.73P < 0.05
Four and a half LIM domains protein 1P97447Fhl11.22P < 0.051.22P < 0.05
Lysosomal-trafficking regulatorP97412Lyst1.43P < 0.051.36P < 0.05
DNA replication licensing factor MCM2P97310Mcm20.53P < 0.050.13P < 0.05
Isochorismatase domain-containing protein 2AP85094Isoc2a0.74P < 0.051.90P < 0.05
Syntaxin-4P70452Stx41.32P < 0.051.23P < 0.05
Ena/VASP-like proteinP70429Evl0.78P < 0.050.71P < 0.05
Plexin-A2P70207Plxna20.75P < 0.050.60P < 0.05
Dynein light chain 1, cytoplasmicP63168Dynll10.72P < 0.050.64P < 0.05
Thyroid hormone receptor alphaP63058Thra0.76P < 0.050.64P < 0.05
Calmodulin regulator protein PCP4P63054Pcp41.29P < 0.053.61P < 0.05
Cellular retinoic acid-binding protein 1P62965Crabp11.34P < 0.050.81P < 0.05
60S ribosomal protein L32P62911Rpl320.81P < 0.050.54P < 0.05
60S ribosomal protein L30P62889Rpl300.78P < 0.050.52P < 0.05
60S ribosomal protein L23aP62751Rpl23a0.81P < 0.050.62P < 0.05
Hippocalcin-like protein 1P62748Hpcal11.30P < 0.050.71P < 0.05
Ubiquitin-conjugating enzyme E2 HP62257Ube2h0.61P < 0.050.44P < 0.05
40S ribosomal protein S15aP62245Rps15a0.81P < 0.050.64P < 0.05
60S ribosomal protein L26P61255Rpl260.81P < 0.050.61P < 0.05
40S ribosomal protein S20P60867Rps200.76P < 0.050.55P < 0.05
Myocardin-related transcription factor BP59759Mrtfb1.21P < 0.051.42P < 0.05
SH3 domain-binding protein 1P55194Sh3bp10.74P < 0.051.69P < 0.05
Tropomodulin-1P49813Tmod10.64P < 0.052.65P < 0.05
Glutamate decarboxylase 1P48318Gad10.73P < 0.051.44P < 0.05
60S ribosomal protein L13P47963Rpl130.82P < 0.050.65P < 0.05
60S ribosomal protein L6P47911Rpl60.83P < 0.050.64P < 0.05
Signal transducer and activator of transcription 5BP42232Stat5b0.62P < 0.050.50P < 0.05
Tubulin–tyrosine ligaseP38585Ttl0.60P < 0.050.65P < 0.05
CD81 antigenP35762Cd810.58P < 0.051.55P < 0.05
Ras-related protein Rab-5CP35278Rab5c0.78P < 0.050.63P < 0.05
cAMP-dependent protein kinase type II-beta regulatory subunitP31324Prkar2b0.83P < 0.050.80P < 0.05
ProgranulinP28798Grn1.40P < 0.051.36P < 0.05
X-ray repair cross-complementing protein 5P27641Xrcc50.75P < 0.050.75P < 0.05
26S proteasome non-ATPase regulatory subunit 7P26516Psmd70.77P < 0.050.72P < 0.05
Splicing factor U2AF 65 kDa subunitP26369U2af21.79P < 0.050.53P < 0.05
Neuroendocrine convertase 2P21661Pcsk21.21P < 0.051.25P < 0.05
Neurofilament heavy polypeptideP19246Nefh1.52P < 0.052.05P < 0.05
Complement C1q subcomponent subunit BP14106C1qb1.20P < 0.051.56P < 0.05
Neuroendocrine protein 7B2P12961Scg51.22P < 0.051.26P < 0.05
Integrin beta-2P11835Itgb20.52P < 0.053.11P < 0.05
Cyclin-dependent kinase 1P11440Cdk10.81P < 0.050.62P < 0.05
Elongation factor 1-alpha 1P10126Eef1a10.79P < 0.050.48P < 0.05
Transmembrane protein 254cP0DN91Tmem254c0.69P < 0.050.38P < 0.05
WAS/WASL-interacting protein family member 3P0C7L0Wipf31.27P < 0.051.75P < 0.05
Superoxide dismutase [Mn], mitochondrialP09671Sod20.74P < 0.052.08P < 0.05
Mast/stem cell growth factor receptor KitP05532Kit0.77P < 0.052.37P < 0.05
NADH-ubiquinone oxidoreductase chain 2P03893Mtnd21.47P < 0.052.65P < 0.05
Cytochrome c oxidase subunit 3P00416mt-Co31.32P < 0.051.44P < 0.05
3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7O88736Hsd17b70.76P < 0.050.56P < 0.05
7-dehydrocholesterol reductaseO88455Dhcr70.79P < 0.050.46P < 0.05
Metaxin-2O88441Mtx21.41P < 0.051.60P < 0.05
Electrogenic sodium bicarbonate cotransporter 1O88343Slc4a41.55P < 0.051.74P < 0.05
Transcription factor Sp3O70494Sp31.23P < 0.050.70P < 0.05
Homeobox protein PKNOX1O70477Pknox10.79P < 0.051.38P < 0.05
Tetraspanin-6O70401Tspan60.82P < 0.050.63P < 0.05
Stathmin-3O70166Stmn30.83P < 0.050.59P < 0.05
Transcription elongation factor SPT5O55201Supt5h0.78P < 0.050.69P < 0.05
Barrier-to-autointegration factorO54962Banf10.76P < 0.050.35P < 0.05
Syndecan-4O35988Sdc41.70P < 0.052.53P < 0.05
Cleavage and polyadenylation specificity factor subunit 2O35218Cpsf20.83P < 0.050.55P < 0.05
Lysosomal alpha-mannosidaseO09159Man2b10.82P < 0.051.30P < 0.05
Histone deacetylase 1O09106Hdac10.68P < 0.050.63P < 0.05
60 kDa SS-A/Ro ribonucleoproteinO08848RO600.77P < 0.050.61P < 0.05
YjeF N-terminal domain-containing protein 3F6W8I0Yjefn30.70P < 0.052.54P < 0.05
A-kinase anchor protein 5D3YVF0Akap51.23P < 0.051.51P < 0.05
3'-5' RNA helicase YTHDC2B2RR83Ythdc21.23P < 0.051.22P < 0.05
CDGSH iron-sulfur domain-containing protein 3, mitochondrialB1AR13Cisd31.27P < 0.050.74P < 0.05
Damage-control phosphatase ARMT1A6H630Armt10.79P < 0.051.41P < 0.05
Apical junction component 1 homologA2AJA9Ajm10.75P < 0.051.41P < 0.05
Oxysterol-binding protein-related protein 9A2A8Z1Osbpl91.29P < 0.050.80P < 0.05

List of the several sevoflurane-related significantly differential proteins in condition 3.

3.4. Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analysis of sevoflurane-related proteins

We used the DAVID database (https://david.ncifcrf.gov/home.jsp) for bioinformatics research, including GO and KEGG, to further determine the role of DEPs. The GO term is a collection of three primary ontologies: biological process (BP), molecular function (MF), and cellular component (CC), and GO functions of all DEPs have been annotated. We also performed a KEGG pathway analysis to identify the most important biochemical functions of identified DEPs.

For BP terms, the first three terms were lipid metabolic process (7.2%), translation (4.3%), and response to oxidative (2.3%), according to the percentage. The top 11 significantly enriched BP terms were translation, lipid metabolic process, cytoplasmic translation, regulation of neuron projection development, regulation of Golgi organization, response to oxidative stress, regulation of protein kinase A signaling, positive regulation of protein kinase activity, mitochondrial translation, modulation of synaptic transmission, and aerobic respiration (Figure 4A).

Figure 4

Figure 4

GO and KEGG functional enrichment analyses of 433 differentially expressed proteins. (A) The first 11 enriched GO terms of biological process. (B) The first 10 enriched GO terms of molecular functions. (C) The first 10 enriched GO terms of cellular components. (D) Differentially expressed protein pathway enriched by KEGG pathway analysis. n = 5 mice/group. GO, Gene Ontology; KEGG, Kyoto Encyclopedia of Genes and Genomes.

For MF terms, protein binding (34.3%), nucleotide binding (13.9%), and RNA binding (8.3%) were ranked first. The top 10 significantly enriched MF terms were enzyme binding, structural constituent of ribosome, protein binding, nucleotide binding, tubulin binding, calmodulin binding, RNA binding, protein kinase binding, small GTPase binding, and ATP binding (Figure 4B).

For CC terms, we discovered that cytoplasm (47.6%), membrane (40.6%), and cytosol (29.7%) were the three most significant ratios. The top 10 CC terms that were significantly enriched were as follows: mitochondrion, cytoplasm, mitochondrial inner membrane, cytosol, ribosome, intracellular membrane-bounded organelle, endoplasmic reticulum, membrane, endosome, and lamellipodium (Figure 4C).

The top six enriched pathways with significant differences were as follows: Parkinson's disease, Alzheimer's disease, chemical carcinogenesis, reactive oxygen species (ROS), oxidative phosphorylation, pathways of neurodegeneration, multiple diseases, and ribosomes (Figure 4D).

3.5. Validation of CHGB, PTEN, MAP2c, and SOD2

We performed western blotting to validate the findings of the quantitative proteomics analysis (Figure 4). CHGB, PTEN, MAP2c, and SOD2 were selected based on their biological function (Supplementary Tables 14) and antibody availability. Compared with neonatal mice treated with oxygen, newborn mice subjected to multiple exposures of sevoflurane anesthesia exhibited elevated expression levels of CHGB, PTEN, and MAP2c protein in the cortex, whereas that of SOD2 was notably reduced (*P < 0.05, vs. P6 + control group). No statistically significant difference was detected between the adult groups (Figure 5).

Figure 5

Figure 5

Differences in the expression of CHGB, PTEN, MAP2c, and SOD2 proteins in the cerebral cortex of neonatal and adult mice after multiple exposures to sevoflurane anesthesia. (A) Differences in the relative expression levels of (B) CHGB, (C) PTEN, (D) MAP2c, and (E) SOD2 in mice cerebral cortex at various ages and treatments. n = 5 mice/group. Results are expressed as mean ± standard deviation (SD). *P < 0.05 vs. P6 + control group, #P < 0.05 vs. P6 + Sevoflurane group. P6, postnatal day 6.

4. Discussion

Based on previous research (711), we discovered that newborn mice exhibit neurotoxicity after multiple exposures to sevoflurane anesthesia. In the current study, we employed quantitative proteomic analysis using TMTpro(16-plek) tagging and LC-MS/MS to identify 443 DEPs. Moreover, we confirmed that these DEPs are related to unique mechanisms induced following multiple sevoflurane exposure-induced neurotoxicity during development. It is important to emphasize that we selected TMTpro as a label owing to the benefit of concurrent measurement across numerous samples, which markedly minimized batch effects (15).

The DAVID database was used to annotate and evaluate the functions and pathways of the DEPs. Herein, sevoflurane could induce neurotoxicity by influencing major mechanisms of mitochondrial energy metabolism (16), tau phosphorylation (8), and neuroinflammation (17). Our results corroborate those of previous reports, as determined using the GO/KEGG analysis. KEGG pathway analysis revealed that pathways of neurodegenerative diseases, including Parkinson's disease and Alzheimer's disease, were significantly enriched. Moreover, ROS- and oxidative phosphorylation-related pathways play a pivotal role in developmental neurotoxicity induced by multiple exposures to sevoflurane anesthesia. ROS is a toxic byproduct of aerobic metabolism and an indicator of oxidative stress-induced cellular damage. Typically, ROS are produced by mitochondria within the cell, and mitochondrial dysfunction elevates ROS levels to enhance inflammatory processes. Electron transport in the respiratory chain mediates oxidative phosphorylation. Sevoflurane inhibits the mitochondrial complex of the electron transport chain (18), facilitating the generation of oversized ROS. Using the GO analysis, we also identified mitochondrion-related enriched terms. These results indicate that the disrupted mitochondrial energy metabolism plays a significant role in sevoflurane-induced developmental neurotoxicity.

Considering the availability of antibodies and the biological functions of the protein (Supplementary Table 1), we selected four DEPs for verification: CHGB, PTEN, MAP2c, and SOD2. Herein, we noted that expression levels of CHGB, PTEN, and MAP2c increased, whereas those of SOD2 decreased. The results of the western blotting analysis were consistent with the trends predicted by proteome analysis, which demonstrated the reliability of TMT-based quantitative proteomics analysis.

CHGB is known to be associated with neurodegenerative diseases, including schizophrenia and Parkinson's disease (19, 20). As a type of neuroendocrine secretory granule protein, CHGB plays a key role in the regulated secretory pathway, impacting the secretion of trophic factors that modulate synaptic maturation of developing neurons (21), and is involved in the regulation of synaptic plasticity, which is related to memory formation (22). Combined with our findings exhibited in the BP of enriched GO terms (Figure 4A), multiple exposures to sevoflurane anesthesia could induce dysfunctional synaptic transmission in neonatal mice by increasing CHGB expression. PTEN protein is known to play a potential role in regulating the structure and plasticity of neurons, which hinders the Akt/mTOR signaling pathway to decrease the growth and proliferation of neurons and the activation of autophagy. In neonatal mice exposed to sevoflurane anesthesia, elevated PTEN expression may indicate neuronal loss in key brain regions that mediate cognitive function during neurodevelopment, and excessive activation of autophagy leads to autophagic programmed cell death (23, 24). The observed alterations in PTEN expression are consistent with several previous studies (25, 26). MAP2 exhibits microtubule stabilization activities that involve neurogenesis, morphogenesis, and migration for the development of axons and dendrites. MAP2 has three phenotypes: MAP2c (70 kDa), MAP2a, and MAP2b (both 280 kDa). MAP2a and MAP2b are expressed in the brains of adult mice but not newborn pups, and neonatal mice exhibit low MAP2b expression and abundant levels of MAP2c. MAP2c continues to decrease in abundance until adulthood (27). We selected MAP2c to verify quantitative proteomics owing to its specific expression during the newborn stage. Tau is expressed abundantly in neonatal mice when compared with that in adult mice, and some key phosphorylated-tau sites that detach from microtubules are increased in newborn mice exposed to sevoflurane anesthesia (8, 28). MAP2c and tau compete for binding sites, which is mediated by several factors (29). Therefore, under sevoflurane anesthesia, increased MAP2c brain expression may be influenced by elevated tau in neonatal mice, which could be a compensatory mechanism to maintain microtubule stability. SOD2, an enzyme belonging to the iron/manganese superoxide dismutase family and involved in the mitochondrial catabolic pathway, converts the superoxide anion to hydrogen peroxide, and the former is a potentially damaging product to the brain. The loss of SOD2 plays a critical role in the progression of neurodegenerative diseases (30, 31). Herein (32), the protein expression of SOD2 was attenuated in the hippocampus of neonatal mice exposed to 3% sevoflurane for 4 h. In addition, mitochondrion-related mechanisms are highly associated with sevoflurane-induced developmental neurotoxicity. Consequently, reduced SOD2 protein expression in newborn pups with multiple exposures to sevoflurane may result in elevated superoxide anion oxidation and oxidative stress damage in the brain.

In summary, we examined the mechanism underlying sevoflurane-induced neurotoxicity in newborn mice using TMT labeling and LS-MS/MS. Bioinformatic analysis was applied to identify DEPs, and we underlined the possibility of DNA damage through the mRNA surveillance pathway as a mechanism of sevoflurane-induced developmental neurotoxicity. Multiple sevoflurane exposures can cause brain damage and cognitive deficits in newborn mice, mediated via elevated levels of CHGB, PTEN, and MAP2c protein expression and reduced SOD2 expression. Our findings shed light on the mechanisms underlying the neurotoxicity induced by multiple exposures to sevoflurane anesthesia during development.

Statements

Data availability statement

The original contributions presented in the study are publicly available. This data can be found at: ProteomeXchange, http://www.proteomexchange.org/, PXD037294.

Ethics statement

All studies were approved by the Animal Experimental Ethics Committee at Tianjin Medical University General Hospital in Tianjin, China (Approval No. IRB2021-DWFL-210).

Author contributions

JF, HL, and YZ performing all experiments, analyzing the data, and writing the original draft. YYa and XZ prepared the figures. YaYu conceived the study and reviewed the manuscript. YoYu supervised the study. All authors have read and approved the final version of the manuscript.

Funding

This study was supported by the National Natural Science Foundation of China (Grant Numbers 82001149 and 82072150), Tianjin Natural Science Foundation (Grant Number 20JCQNJC01050), Tianjin Education Commission for Higher Education Science and Technology Development Fund (Grant Number 2019KJ201), and Tianjin Research Innovation Project for Postgraduate Students (Grant Number 2021YJSS158).

Acknowledgments

We would like to give our sincere gratitude to the editor and reviewers for their constructive comments.

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

Supplementary material

The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fneur.2022.1056947/full#supplementary-material

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Summary

Keywords

sevoflurane, developing brain, neurotoxicity, TMT-based quantitative proteomic analysis, anesthetic toxicity

Citation

Feng J, Lin H, Zhao Y, Yang Y, Zhuang X, Yu Y and Yu Y (2022) Tandem mass tag-based quantitative proteomic analysis of effects of multiple sevoflurane exposures on the cerebral cortex of neonatal and adult mice. Front. Neurol. 13:1056947. doi: 10.3389/fneur.2022.1056947

Received

29 September 2022

Accepted

28 November 2022

Published

13 December 2022

Volume

13 - 2022

Edited by

Hong Ni, Children's Hospital of Soochow University, China

Reviewed by

Jia Yan, Shanghai Jiao Tong University, China; Xueyuan Hu, Qingdao Agricultural University, China

Updates

Copyright

*Correspondence: Yang Yu Yonghao Yu

†These authors have contributed equally to this work

This article was submitted to Pediatric Neurology, a section of the journal Frontiers in Neurology

Disclaimer

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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