Frontiers in Bioinformatics

Original Research

Accepted on 22 May 2025

IN-SILICO MOLECULAR ANALYSIS AND BLOCKING OF THE VIRAL G PROTEIN OF NIPAH VIRUS INTERACTING WITH EPHRIN B2 AND B3 RECEPTOR BY USING PEPTIDE MASS FINGERPRINTING

in Protein Bioinformatics

Ayesha Sajjad
ihteshamul Haq
Rabia Syed
Faheem Anwar
Muhammad Hamza
Faisal Nouroz
Tehmina Kiani

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1526566

175 views

Brief Research Report

Published on 22 May 2025

MORE-RNAseq: a pipeline for quantifying retrotransposition-capable LINE1 expression based on RNA-seq data

in RNA Bioinformatics

Yutaka Nakachi
Jianbin Du
Risa Watanabe
Yutaro Yanagida
Miki Bundo
Kazuya Iwamoto

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1575346

807 views

Original Research

Published on 19 May 2025

Integrative multi-omics study identifies sex-specific molecular signatures and immune modulation in bladder cancer

in Integrative Bioinformatics

Yizhou Wang
Priyanka Bhandary
Kevin Griffin
Jason H. Moore
Xue Li
Zhiping Paul Wang

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1575790

1,110 views

Original Research

Accepted on 13 May 2025

NeSyDPP4-QSAR: Discovering DPP-4 Inhibitors for Diabetes Treatment with a Neuro-symbolic AI Approach

in Integrative Bioinformatics

Delower Hossain
Ehsan Saghapour
Jake Y Chen

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1603133

288 views

Original Research

Published on 13 May 2025

Exploiting subtractive genomics to identify novel drug targets and new immunogenic candidates against Bordetella pertussis: an in silico study

in Drug Discovery in Bioinformatics

Mahshid Khazani Asforooshani
Narjes Noori Goodarzi
Behzad Shahbazi
Nayereh Rezaie Rahimi
Kimia Mahdavian
Mahdi Rohani
Farzad Badmasti

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1570054

1,049 views

Original Research

Accepted on 12 May 2025

Temporal GeneTerrain: Advancing Precision Medicine Through Dynamic Gene Expression Visualization

in Integrative Bioinformatics

Ehsan Saghapour
Rahul Sharma
Delower Hossain
Kevin Song
Zhandos Sembay
Jake Y Chen

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1602850

331 views

Perspective

Published on 08 May 2025

Structural biology meets typography: using protein structures to inspire creative expression and connect diverse audiences

in Data Visualization

Leonora Martínez-Núñez

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1589122

1,007 views

Technology and Code

Published on 08 May 2025

micRoclean: an R package for decontaminating low-biomass 16S-rRNA microbiome data

in Genomic Analysis

Rachel Griffard-Smith
Emily Schueddig
Diane E. Mahoney
Prabhakar Chalise
Devin C. Koestler
Dong Pei

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1556361

884 views

Original Research

Published on 06 May 2025

Computational drug discovery of potential 5α-reductase phytochemical inhibitors and hair growth promotion using in silico techniques

in Drug Discovery in Bioinformatics

Behnam Hasannejad-Asl
Farkhondeh Pooresmaeil
Sareh azadi
Ali Najafi
Ali Esmaeili
Saeid Bagheri-Mohammadi
Bahram Kazemi

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1570101

1,396 views

Original Research

Published on 06 May 2025

Tumor tissue-of-origin classification using miRNA-mRNA-lncRNA interaction networks and machine learning methods

in RNA Bioinformatics

Ankita Lawarde
Masuma Khatun
Prakash Lingasamy
Andres Salumets
Vijayachitra Modhukur

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1571476

1,855 views

Brief Research Report

Published on 06 May 2025

pubCounteR: an R package for interrogating published literature for experimentally-derived gene lists within a user-defined biological context

in Data Visualization

Marina Leer
George A. Soultoukis
Markus Jähnert
Masoome Oveisi
Dirk Walther
Tim J. Schulz

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1523184

926 views

Technology and Code

Accepted on 30 Apr 2025

ngx-mol-viewers: Angular Components for Interactive Molecular Visualization in Bioinformatics

in Data Visualization

Damiano Clementel
Alessio Del Conte
Alexander M Monzon
Silvio C E Tosatto

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1586744

224 views

Methods

Published on 30 Apr 2025

Integrating phylogenies with chronology to assemble the tree of life

in Evolutionary Bioinformatics

Jose Barba-Montoya
Jack M. Craig
Sudhir Kumar

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1571568

966 views

Review

Published on 23 Apr 2025

Artificial intelligence in variant calling: a review

in Genomic Analysis

Omar Abdelwahab
Davoud Torkamaneh

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1574359

2,608 views
2 citations

Mini Review

Published on 17 Apr 2025

Primer on machine learning applications in brain immunology

in Single Cell Bioinformatics

Niklas Binder
Ashkan Khavaran
Roman Sankowski

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1554010

1,370 views

Original Research

Published on 17 Apr 2025

Classification of collagen remodeling in asthma using second-harmonic generation imaging, supervised machine learning and texture-based analysis

in Computational BioImaging

Natasha N. Kunchur
Joshua J. A. Poole
Jesse Levine
Tillie-Louise Hackett
Rebecca Thornhill
Leila B. Mostaço-Guidolin

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1539936

1,162 views