Frontiers in Bioinformatics | Data Visualization

Brief Research Report

Published on 05 Apr 2022

The Importance of Weakly Co-Evolving Residue Networks in Proteins is Revealed by Visual Analytics

in Data Visualization

Sidharth Mohan
Hatice Gulcin Ozer
William C. Ray

Frontiers in Bioinformatics

doi 10.3389/fbinf.2022.836526

1,911 views
2 citations

Original Research

Published on 24 Feb 2022

DJExpress: An Integrated Application for Differential Splicing Analysis and Visualization

in Data Visualization

Lina Marcela Gallego-Paez
Jan Mauer

Frontiers in Bioinformatics

doi 10.3389/fbinf.2022.786898

4,808 views
6 citations

Review

Published on 17 Feb 2022

Uncertainty Visualization: Concepts, Methods, and Applications in Biological Data Visualization

in Data Visualization

Daniel Weiskopf

Frontiers in Bioinformatics

doi 10.3389/fbinf.2022.793819

15,774 views
23 citations

Brief Research Report

Published on 15 Feb 2022

Development and Application of Automatized Routines for Optical Analysis of Synaptic Activity Evoked by Chemical and Electrical Stimulation

in Data Visualization

Debarpan Guhathakurta
Enes Yağız Akdaş
Anna Fejtová
Eva-Maria Weiss

Frontiers in Bioinformatics

doi 10.3389/fbinf.2022.814081

1,604 views
4 citations

Technology and Code

Published on 11 Feb 2022

Naview: A d3.js Based JavaScript Library for Drawing and Annotating Voltage-Gated Sodium Channels Membrane Diagrams

in Data Visualization

Marcelo Querino Lima Afonso
Néli José da Fonseca Júnior
Thainá Godinho Miranda
Lucas Bleicher

Frontiers in Bioinformatics

doi 10.3389/fbinf.2022.774417

2,808 views
4 citations

Technology and Code

Published on 04 Feb 2022

ApE, A Plasmid Editor: A Freely Available DNA Manipulation and Visualization Program

in Data Visualization

M. Wayne Davis
Erik M. Jorgensen

Frontiers in Bioinformatics

doi 10.3389/fbinf.2022.818619

107,973 views
180 citations

Original Research

Published on 31 Jan 2022

New Approach to Accelerated Image Annotation by Leveraging Virtual Reality and Cloud Computing

in Data Visualization

Corentin Guérinot
Valentin Marcon
Charlotte Godard
Thomas Blanc
Hippolyte Verdier
Guillaume Planchon
Francesca Raimondi
Nathalie Boddaert
Mariana Alonso
Kurt Sailor

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.777101

5,011 views
7 citations

Original Research

Published on 26 Jan 2022

Interactive, Visual Simulation of a Spatio-Temporal Model of Gas Exchange in the Human Alveolus

in Data Visualization

Kerstin Schmid
Andreas Knote
Alexander Mück
Keram Pfeiffer
Sebastian von Mammen
Sabine C. Fischer

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.774300

5,300 views
5 citations

Methods

Published on 20 Jan 2022

Towards Human in the Loop Analysis of Complex Point Clouds: Advanced Visualizations, Quantifications, and Communication Features in Virtual Reality

in Data Visualization

Thomas Blanc
Hippolyte Verdier
Louise Regnier
Guillaume Planchon
Corentin Guérinot
Mohamed El Beheiry
Jean-Baptiste Masson
Bassam Hajj

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.775379

3,266 views
3 citations

Original Research

Published on 10 Jan 2022

Extending Association Rule Mining to Microbiome Pattern Analysis: Tools and Guidelines to Support Real Applications

in Data Visualization

Agostinetto Giulia
Sandionigi Anna
Bruno Antonia
Pescini Dario
Casiraghi Maurizio

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.794547

3,728 views
4 citations

Brief Research Report

Published on 13 Dec 2021

Visualizing Phytochemical-Protein Interaction Networks: Momordica charantia and Cancer

in Data Visualization

Yumi L. Briones
Alexander T. Young
Fabian M. Dayrit
Armando Jerome De Jesus
Nina Rosario L. Rojas

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.768886

6,518 views
1 citation

Review

Published on 08 Dec 2021

Cryo-EM Analyses Permit Visualization of Structural Polymorphism of Biological Macromolecules

in Data Visualization

Wei-Hau Chang
Shih-Hsin Huang
Hsin-Hung Lin
Szu-Chi Chung
I-Ping Tu

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.788308

4,403 views
9 citations

Review

Published on 02 Dec 2021

Exploring the Microbiome Analysis and Visualization Landscape

in Data Visualization

Jannes Peeters
Olivier Thas
Ziv Shkedy
Leyla Kodalci
Connie Musisi
Olajumoke Evangelina Owokotomo
Aleksandra Dyczko
Ibrahim Hamad
Jaco Vangronsveld
Markus Kleinewietfeld

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.774631

29,306 views
9 citations

Technology and Code

Published on 25 Nov 2021

GeneCloudOmics: A Data Analytic Cloud Platform for High-Throughput Gene Expression Analysis

in Data Visualization

Mohamed Helmy
Rahul Agrawal
Javed Ali
Mohamed Soudy
Thuy Tien Bui
Kumar Selvarajoo

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.693836

13,060 views
5 citations

Original Research

Published on 08 Nov 2021

VTR: A Web Tool for Identifying Analogous Contacts on Protein Structures and Their Complexes

in Data Visualization

Vitor Pimentel
Diego Mariano
Letícia Xavier Silva Cantão
Luana Luiza Bastos
Pedro Fischer
Leonardo Henrique Franca de Lima
Alexandre Victor Fassio
Raquel Cardoso de Melo-Minardi

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.730350

8,009 views
10 citations

Technology and Code

Published on 25 Aug 2021

Peptimetric: Quantifying and Visualizing Differences in Peptidomic Data

in Data Visualization

Erik Hartman
Simon Mahdavi
Sven Kjellström
Artur Schmidtchen

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.722466

4,122 views