Abstract
After solid organ transplantation, antibody-mediated rejection (AMR) is the most important cause of late allograft loss. Central in this process are donor-specific antibodies (DSAs) targeting mismatched Human Leukocyte Antigens (HLA) on recipient endothelial cells. Alloreactive B cells can directly bind to mismatched HLA molecules expressed by endothelial cells of a transplanted organ through their B cell receptor. Upon antigen recognition, B cells can differentiate into memory B cells and plasma cells producing class switched, high affinity DSAs. Cognate interaction between alloreactive follicular T helper cells (Tfh) and B cells, both expressing the transcription factor BCL6, is essential for long-lived plasma cell formation. Blockade of BCL6 by inhibitory compounds has emerged as a promising therapeutic strategy in the treatment of BCL6-expressing B cell lymphomas. Beyond its direct cytotoxic effects on malignant B cells, BCL6 inhibition also disrupts the function of germinal center B cells and impairs survival and activation of Tfh cells after immunization. These findings suggest that BCL6-targeting therapies may have potential as an immunosuppressive strategy in the context of organ transplantation, where controlling the humoral allo-immune response is essential to prevent graft rejection. This article reviews the mechanisms by which BCL6 controls Tfh and B cell differentiation and germinal center formation after organ transplantation. Finally, it outlines how newly discovered BCL6 inhibitory compounds might intervene with these B cell mediated immune responses.
1 Introduction
In solid organ transplantation, antibody-mediated rejection (AMR) is a major cause of late allograft loss. Antibodies directed against the donor, primarily targeting mismatched human leukocyte antigens (HLA), and in some cases, non-HLA antigens, play a key role in its pathophysiology. AMR is histologically characterized by microvascular inflammation (e.g., glomerulitis, peritubular capillaritis), along with the presence of circulating donor-specific antibodies (DSAs) (, ). These DSAs bind antigens expressed on endothelial cells of the allograft, triggering complement activation (often marked by C4d deposition) and antibody-dependent cellular cytotoxicity (ADCC). In addition, upon antibody binding, endothelial cells can become activated, resulting in further promotion of a pro-inflammatory milieu (). Individuals with DSAs prior to (repeat) transplantation are at an increased risk for (hyper)acute rejection (, ). Therefore, organ donors to which HLA-specific antibodies are directed are usually excluded, but this significantly limits donor options (). Despite strategies such as prioritization programs, HLA desensitization, and kidney exchange programs to mitigate risks and expand the donor pool, long waiting times for HLA compatible donor organs for these patients persist (, ). While DSAs are key mediators of AMR, their formation is rooted in the activation and differentiation of HLA-specific B cells, which lead to the formation of memory B cells and DSA-producing plasma cells. This activation is driven by antigen-specific T helper cells called follicular T helper cells (Tfh), which are specialized in providing B cell help. Thus, given their central joint role in AMR, B cells and Tfh cells represent promising targets for early treatment or prevention strategies of AMR. Given that there is an unmet need for immunosuppressive drugs that can treat established AMR and prevent DSA formation (, ), therapies that can target both cell types simultaneously are of great interest.
2 Relevant subsections
2.1 Current drugs used to regulate humoral immune responses in transplantation
With AMR being recognized as the main cause of graft loss in the long-term, interest in targeting the humoral arm of the alloimmune response has grown. Regardless, no approved therapies for prevention or treatment of AMR are currently available (). The most commonly used combination of plasma exchange with intravenous immunoglobulins (IVIg) is being applied clinically in several variations (). Despite this therapy being regarded as standard of care for acute, active AMR, the evidence for its efficacy is low (). The B cell-depleting agent rituximab is often used in conjunction with plasma exchange and IVIg, but notwithstanding its frequent use, prospective trials have reported no benefit of the addition of rituximab to plasma exchange and IVIg (, ).
A recent addition to the armamentarium to target the humoral arm of the alloimmune response is the IgG-degrading enzyme of Streptococcus pyogenes (IdeS) (). With this drug being highly efficient in cleaving circulating IgG within hours, it is conditionally approved by the European Medicines Agency (EMA) for kidney transplantation over a positive crossmatch (). However, a recent study on the use of IdeS to treat AMR in kidney transplant recipients showed no clinical benefit over plasma exchange, despite superiority of IdeS to rapidly diminish DSA levels ().
The proteasome inhibitor Bortezomib selectively targets plasma cells through apoptosis following the unfolded protein response, and is approved for the treatment of multiple myeloma. However, with only limited evidence for its efficacy in the transplantation setting and rather serious side effects (, ), the use of bortezomib for treatment of AMR has stalled. More recently, monoclonal antibodies targeting CD38 (daratumumab, felzartamab) have shown promising results in resolving AMR (, ), possibly due to targeting CD16bright natural killer (NK) cells alongside plasma cells.
A role for the pleiotropic cytokine IL-6 in driving B cell activation and differentiation to antibody-producing plasma cells was suggested by murine studies on AMR (). Nevertheless, while a small single-center clinical study on the treatment of chronic active AMR using the IL-6 targeting antibody tocilizumab showed good patient and graft survival (), a recent phase 3 clinical trial using clazakizumab to treat chronic, active AMR was halted prematurely due the lack of efficacy. While IL-6 plays a role in early processes of Tfh differentiation by inducing BCL6 () and would potentially be targeted, directly targeting BCL6 may offer a more potent inhibition of both B cells and Tfh cells.
2.2 Role of BCL6 in germinal centers
Upon encountering allo-antigens, often in the form of donor HLA molecules, naïve B cells migrate to lymphoid follicles in secondary lymphoid organs. There, they interact with cognate alloreactive CD4+ Tfh cells that have been primed by antigen-presenting cells. This interaction, known as linked recognition, involves B cells presenting processed antigens as peptides to Tfh cells in HLA class II, and initiates Germinal Center (GC) formation. GCs are transient structures where B cells undergo somatic hypermutation (SHM) and class switch recombination (CSR), enhancing antibody affinity and function (–). Maintenance of both SHM and CSR requires signals provided by Tfh cells. Following priming by dendritic cells (DCs), prolonged allogeneic pressure induces expression of Inducible T-cell COStimulator (ICOS) in a subset of T helper cells. Subsequent ICOS–ICOSL interactions with DCs promote the upregulation of BCL6, CXCR5, and PD-1, driving Tfh cell differentiation and migration toward GCs by suppressing transcription factors associated with other helper T cell subsets (like TBET or GATA3) (–). Tfh cells are critical for B cell activation in GCs, driving differentiation and proliferation of GC B cells through the co-stimulatory signal CD40-CD154, coupled with IL-21 production, triggering CSR and SHM, respectively (–). Under the selective conditions of SHM, BCL6 in GC B cells enhances proliferative capacity and represses genes associated with DNA damage checkpoints, facilitating the DNA modifications required for CSR and SHM (, ). As GC B cells undergo CSR, increased BCR-antigen binding affinity by B cells and stronger CD40 signaling from Tfh cells drive downregulation of BCL6 in B cells, promoting differentiation into plasma cells. Thus, BCL6 is essential for Tfh cell identity and function within GCs, and maintaining effective SHM activity in GC B cells before their differentiation into effector plasma cells.
2.3 BCL6 structure and domains
BCL6 belongs to the BTB/POZ/zinc finger family of transcription factors () and consists of 3 domains, namely an N-terminal BTB repressor domain (Broad-complex, Tramtrack and Brick-a-brac), a second repressor (middle-) domain (RD2), and a C-terminal zinc finger domain (Figure 1A) (). BCL6 functions in the form of a dimer, consisting of two BCL6 molecules coupled through their BTB domains. BCL6 binds directly to BCL6-specific DNA sequences through its zinc finger domain, enabling direct transcriptional repression (Figure 1B). This way, BCL6 competes with other transcription factors for DNA occupancy, and mediates protein-protein interactions. Secondly, BCL6 exerts repressive activity through its BTB and RD2 domains, by recruiting class 1 and 2 Histone deacetylase complexes (HDACs), and various co-repressor molecules, forming co-repressor complexes with the HDACs (Figure 1B). De-acetylation of histones targeted by these HDACS represses BCL6 target genes (e.g., BCL2, MYC, JUNB, FAIM3, HSP90AB, and IRF4), regulating cell differentiation (Figure 1C) (, ). The most significant co-repressor molecules associated with BCL6’s repressor domains are BCOR (BCL6 interacting corepressor) (), NCOR1 (nuclear receptor corepressor), and SMRT1 (silencing mediator of retinoid and thyroid hormone receptors), all binding to the BTB domain; MTA3 (Metastasis associated 1 family, member 3), which binds to the RD2 domain; and CTBP1 (C-terminal-binding protein 1), binding to both BTB and RD2 domains (Figure 1B) (). BTB domain driven co-repressor activity drives Tfh cell differentiation and B cell proliferation and survival, needed during SHM and CSR. Co-repressor activity by the RD2 domain plays a bigger role in early GC-commitment, through migration and pre-GC differentiation of B cells.
Figure 1
2.4 BCL6 inhibitory- or degrading-compounds
Several compounds have been developed to block BCL6 activity in the setting of B cell malignancies and autoimmune diseases, including peptides and small molecule BCL6 inhibitors. Both types of compounds block the BTB domain of BCL6, leading to inhibition of co-repressor function and subsequent increased expression of BCL6 target genes. Since the discovery of BCL6 as an important oncogene in B cell lymphoma formation, initial studies focused on treating B cell malignancies using BCL6 inhibition. Preclinical studies showed that BCL6 inhibition halted BCL6-positive tumor growth in mice, but also suppressed GC formation (
Table 1
| Novelty | Compound | Year | Study model | Main finding/advantage |
|---|---|---|---|---|
| Peptides | BBD peptide | 2004 | In Vivo, [mice] | Apoptosis of DLBCL cells, Abrogation of GCs |
| RI-BPI | 2009 | In Vivo, [mice] | Kills human DLBCL cell-induced tumors | |
| Small Molecules | 79-6 | 2010 | In Vivo, [mice] | First small molecule |
| FX-1 | 2016 | In Vivo, [mice] | Increased binding strength to BTB-domain compared to 79-6 | |
| WK369 | 2023 | In Vivo, [mice] | Stronger antitumor effects than FX-1 | |
| Prodrug of FX-1 | AP-4-287 | 2021 | In Vivo, [mice] | Increased solubility, represses Tfh and GC reactions |
| Orally available: | GSK137 | 2021 | In Vivo, [mice] | Suppresses antibody responses |
| WK500B | 2022 | In Vivo, [mice] | Inhibits GC formation and DLBCL cell growth | |
| OICR12694 | 2023 | In Vivo, [mice/dogs] | Inhibits DLBCL cell growth, good oral bioavailability | |
| Irreversible Binding: | TMX-2164 | 2020 | In Vitro | Improved inhibitory activity and sustained target engagement, as compared to reversible inhibition |
| Degradation: | BI-3802 | 2017 | In Vitro | BCL6 degradation is more potent than BCL6 inhibition |
| ‘PROTAC 15’ | 2018 | In Vitro | BCL6 PROTAC shows incomplete BCL6 degradation | |
| DZ-837 | 2024 | In Vivo, [mice] | Effective sustained BCL6 degradation as DLBCL treatment | |
| Upcoming Clinical Trials: | ARV-393 | 2024 | In vivo, [human] | A phase-1 study in adult participants with advanced non-Hodgkin’s lymphoma |
| BMS-986458 | 2024 | In vivo, [human] | A phase 1/2, multi-center study evaluating safety, tolerability, drug levels, and activity of BMS-986458 in lymphoma. |
An overview of the most relevant developments in BCL6 inhibition research.
An overview of the more relevant research papers which have advanced the field on BCL6 inhibition and their corresponding information, categorized.
Inhibition of BCL6 activity can be established by several types of compounds, which bind to different parts of the BCL6 protein, mostly the BTB domain. Co-repressors such as SMRT1, BCOR, and NCOR1 exert their activity by binding to the lateral groove of the BTB domain of two BCL6 molecules as a dimer (Figure 1A). Inhibitors designed to mimic co-repressor binding disrupt BCL6’s activity to form co-repressor complexes, blocking BCL6 activity (Figure 1D). Additionally, BCL6 peptide inhibitors like BTB binding domain motif (BBD) peptides, and retro-inverted BCL6 peptide inhibitor (RI-BPI) peptides can block co-repressor activity and have been shown in multiple studies to inhibit the growth of B cell lymphoma cell lines in vitro and resulting tumor growth in mouse models (
Through computer-aided drug design, the small molecule inhibitor 79–6 was developed to disrupt the interaction of BCL6 with NCOR and SMRT co-repressor complexes, restoring BCL6 target gene expression. This inhibitor was shown to specifically kill BCL6-positive diffuse large B cell Lymphoma (DLBCL) cell lines (
Concomitantly, existing small molecule inhibitors were optimized to improve key pharmacological aspects. BTB-specific inhibitors suffer from poor water solubility. To improve solubility, AP-4–287 was developed as a prodrug of FX-1, increasing aqueous solubility 150-fold. Although AP-4–287 retained the ability to inhibit Tfh cell differentiation and GC formation, the pro-drug required higher concentrations to achieve the same effect as FX-1, and showed a shorter half-life (53). Additionally, orally available small molecule compounds have been developed (GSK137, WK500b, OICR12694), that still effectively inhibit the growth of DLBCL cell lines in mouse models (
To enhance the suppression of BCL6, target protein degradation and irreversible binding have been explored. At first, Kerres et al. simultaneously developed two agents, BI-3812 and BI-3802. While BI-3812 functions as a reversible BCL6 BTB domain inhibitor, BI-3802 unexpectedly induced BCL6 degradation (56). This occurs through polymerization of BCL6, leading to degradation through the ubiquitin-proteasome system (UPS). Proteasomal degradation leads to profound re-expression of BCL6 target genes and anti-proliferative effects comparable to genetic knockout of BCL6 in DLBCL models (57). Later, to harness UPS-mediated degradation, a BCL6-targeting PROTAC (Proteolysis Targeting Chimera) was developed, which is a small molecule that tags unwanted proteins (in this case BCL6) for degradation. Unfortunately, this compound only resulted in partial BCL6 depletion, rendering it no more effective than standard inhibitors (58). In contrast, TMX-2164, a covalent inhibitor, irreversibly binds to amino acid Tyr58 in the lateral groove, offering greater potency than BI-3812 without resulting in active degradation (59). Lastly, researchers developed a novel BCL6-targeting PROTAC (DZ-837) featuring an N-phenyl-4-pyrimidinamine scaffold, recruiting UPS in a direct manner for targeted BCL6 degradation (60). This approach was shown to effectively eliminate BCL6 in DLBCL cells, leading to sustained re-expression of downstream genes, while also inducing G1 phase arrest, ultimately suppressing tumor growth. With DZ-837 and other emerging PROTACs, targeted BCL6 degradation is evolving into a powerful therapeutic strategy, further validating targeted protein degradation as a therapeutic approach for targeting BCL6.
Finally, two novel agents, BMS-986458, a BCL6 degrading compound, and ARV-393, a BCL6 targeting PROTAC, are currently under clinical investigation to assess their safety and efficacy in targeting BCL6 in relapsed/refractory non-hodgkin lymphoma patients (61, 62). These clinical trials represent significant advances in the development of targeted therapies against BCL6.
2.5 Application in transplantation
Since BCL6 is a key regulator of malignant B cell growth, most studies on pharmacologically targeting BCL6 are aimed at eliminating BCL6-expressing lymphomas in vivo (
Because of the central role of BCL6 in GC responses, BCL6-inhibition has also been studied in allo-immune responses (65). In an in vitro model of allo-antigen stimulated Tfh and B cells, early addition (day 0) of the small molecule inhibitor 79–6 resulted in inhibition of both alloantigen-driven B cell activation and plasmablast formation, while late addition (day 3 or later) did not (66), highlighting the importance of targeting BCL6 at early stages of cell differentiation. This aligns well with the findings of Cai et al., who showed that following stimulation with red blood cells in vivo (RBCs), pre-established antibody responses were not inhibited by BCL6 blockade, likely because plasma cells were already present prior to treatment (53).
Paz et al. studied the effect of BCL6 inhibition in two mouse models of chronic GvHD (cGvHD) with different pathologies (67). In a GC independent model of sclerodermatous cGvHD, BCL6 inhibition by 79–6 was unable to inhibit the predominant Th1 and Th17 responses, showing the GC restricted activity of BCL6. Additionally, in a GC-driven Bronchiolitis Obliterans cGvHD model, 79–6 did not affect splenic Tfh cell numbers, but did reduce splenic GC B cell numbers and IgG deposition in the lungs, thereby preventing pulmonary dysfunction (67). These data stress that BCL6 inhibition is strictly limited to GC-driven responses, and may thus not affect extrafollicular plasmablast activity (67, 68).
Alternatively, Chen et al. set up a sclerodermatous cGvHD model that does rely on GC activity. Here, BCL6 inhibition by 79–6 alleviated cGvHD symptoms, prolonged survival, and reduced fibrosis in lungs and neck skin (69). Additionally, 79–6 treatment significantly decreased peripheral and splenic Tfh cell and GC B cell numbers and was associated with a reduction of in IgG deposition in the spleens (69). Although both studies employed sclerodermatous cGVHD models, Chen et al. infused total spleen cells—including BCL6-expressing B cells—while Paz et al. used only splenic T cells. This would account for the stronger GC responses observed in Chen’s model. In short, both studies suggest a key role for BCL6-expressing cells in the development of GC driven cGVHD and highlight the significance of BCL6 inhibition in the prevention of such allo-immune responses. More recently, the potential of BCL6 inhibition to prevent heart allograft rejection was investigated. Xia et al. established an allogeneic heart transplantation mouse model, in which BCL6 inhibition was established by 25 mg/kg of FX-1 on the first three days after transplantation. While formation of Tfh cells was inhibited by FX-1, no increase in graft survival, nor any changes in graft pathology were detected. In contrast, a model was set up where administration of CTLA-4-Ig on the first day after transplant prolonged graft survival and delayed Tfh formation to around 28 days (70). When FX-1 was infused in this model, graft survival was significantly increased during this time period, with reduced vascular occlusions and reduced fibrotic areas in the graft. Additionally, GC reactions were inhibited at this time point, as shown by a reduction in Tfh cell and GC B cell numbers in the spleen. And as a result, splenic plasma cell numbers and DSA levels (MFI) were significantly reduced (70).
2.6 Future directions, conclusions and remarks
Preclinical studies have shown that blocking the BTB groove of BCL6 with peptides or small molecules reduces corepressor recruitment and transcription of BCL6, resulting in increased expression of BCL6 target genes and reduced cell growth (
A critical note is that the timing of BCL6 inhibition may be of the essence. Whereas BCL6 plays a pivotal role in differentiation of Tfh and GC B cells and GC formation, BCL6-expression becomes less relevant once differentiation progresses, limiting the therapeutic window for intervention. Based on this, we expect BCL6 inhibition to be best used as a method to prevent B cell activation instead of treatment of an ongoing immune response. Firstly, BCL6 inhibition might be used as induction therapy in the case of sensitized patients, as dormant HLA-specific memory B cells are likely to be present (72). However, since in this case established DSAs and DSA producing plasma cells are not removed, targeting DSAs (e.g. plasmapheresis, Imlifidase) and/or plasma cell depletion therapy should be considered. Secondly, BCL6 inhibition could possibly be used as maintenance immunosuppression, in which it could prevent DSA formation. It should be noted however, that in combination with T cell immunosuppression, the patient is exposed to prolonged elevated risk to infections and lowered vaccine responses. To investigate this matter further, future studies should determine the optimal timing of BCL6 inhibition in a transplant setting and for what clinical indication such intervention could be used (prevention vs. treatment of established AMR). Given its dual role in regulating Tfh and B cell responses, BCL6 inhibition could pave the way for more targeted and effective immunomodulatory therapies in transplantation. While clinical studies in humans are ongoing in the field of oncology, further research is needed to establish efficacy and safety in transplantation. Nonetheless, promising preclinical data suggest that BCL6 inhibition could become a valuable strategy for reducing AMR and improving long-term graft survival.
Statements
Author contributions
RK: Writing – review & editing, Writing – original draft, Visualization. DH: Writing – review & editing, Writing – original draft. LS: Writing – review & editing, Writing – original draft. SH: Supervision, Writing – review & editing, Writing – original draft. CB: Supervision, Writing – review & editing, Writing – original draft.
Funding
The author(s) declare that no financial support was received for the research and/or publication of this article.
Conflict of interest
DH has received lecture fees and consulting fees from Astellas Pharma, Astra Zeneca, Chiesi Pharma, Medincell, Novartis Pharma, Sangamo Therapeutics and Vifor Pharma. He has received grant support from Astellas Pharma, Bristol-Myers Squibb and Chiesi Pharma paid to his institution. DH does not have employment or stock ownership at any of these companies, and neither does he have patents or patent applications.
The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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Supplementary material
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Summary
Keywords
BCL6, transplantation, germinal center (GC), small molecule inhibitor, DLBCL
Citation
Kraaijeveld R, Hesselink DA, Steines L, Heidt S and Baan CC (2025) BCL6 inhibition: a promising approach to prevent germinal center-driven allo-immune responses. Front. Immunol. 16:1667185. doi: 10.3389/fimmu.2025.1667185
Received
16 July 2025
Accepted
15 October 2025
Published
31 October 2025
Volume
16 - 2025
Edited by
Jean Kwun, Duke University, United States
Reviewed by
Annette M. Jackson, Duke University, United States
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Copyright
© 2025 Kraaijeveld, Hesselink, Steines, Heidt and Baan.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Rens Kraaijeveld, R.kraaijeveld@erasmusmc.nl
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