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ORIGINAL RESEARCH article

Front. Microbiol.

Sec. Aquatic Microbiology

Volume 16 - 2025 | doi: 10.3389/fmicb.2025.1620542

This article is part of the Research TopicThe Biological Pump: A Hunt For Microbial Key Players Involved in Ocean Carbon and Nutrient FluxesView all 9 articles

Diatom volatile organic compound production is driven by diel metabolism and the cell cycle

Provisionally accepted
  • 1Oregon State University, Corvallis, United States
  • 2Lawrence Livermore National Laboratories, Livermore, US Minor Outlying Islands

The final, formatted version of the article will be published soon.

Volatile organic compounds (VOCs) are small, low-vapor-pressure molecules emitted from the surface ocean into the atmosphere. In the atmosphere, VOCs can change OH reactivity and condense onto particles to become cloud condensation nuclei. VOCs are produced by phytoplankton, but the conditions leading to VOC accumulation in the surface ocean are poorly understood. In this study, VOC accumulation was measured in real time over a 12 h day – 12 h night cycle in the model diatom Phaeodactylum tricornutum CCMP 2561 during exponential growth. Sixty-three m/z signals were produced in higher concentrations than in cell-free controls. All VOCs, except methanol, were continuously produced over 24 h. All VOCs accumulated to higher concentrations during the day compared to the night, and 11 VOCs exhibited distinct accumulation patterns during the morning hours. Twenty-seven VOCs were associated with known metabolic pathways in P. tricornutum, with most VOCs involved in amino acid and fatty acid metabolism. Patterns of VOC production were strongly associated with diel shifts in cell physiology and the cell cycle. Diel VOC production patterns give a fundamental understanding of the first steps in VOC accumulation in the surface ocean.

Keywords: Volatile Organic Compounds, Diel VOC metabolism, Phytoplankton physiology, Cell Cycle, Central carbon metabolsim

Received: 29 Apr 2025; Accepted: 15 Sep 2025.

Copyright: © 2025 Padaki, Palmer, Jiang, Buchholz, Kimbrel and Halsey. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Kimberly H Halsey, kimberly.halsey@oregonstate.edu

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