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ORIGINAL RESEARCH article

Front. Microbiol.

Sec. Terrestrial Microbiology

Volume 16 - 2025 | doi: 10.3389/fmicb.2025.1633308

This article is part of the Research TopicPlant Mineral Microbe Interactions, Vol IIView all articles

Mass development of a filamentous and likely nitrophilous aerophytic green alga on tree bark: Apatococcus ammoniophilus sp. nov. (Chlorophyta, Trebouxiophyceae)

Provisionally accepted
  • 1Section Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark
  • 2Department Experimental Phycology and Culture Collection of Algae (EPSAG), Albrecht-von-Haller-Institute for Plant Sciences, Georg August University, Göttingen, Germany
  • 3Section Marine Biology, Department of Biology, University of Copenhagen, Copenhagen, Denmark
  • 4Grainger Bioinformatics Center, Field Museum, Chicago, United States
  • 5Institute of Pharmacy/Pharmacognosy, University of Innsbruck, Center for Chemistry and Biomedicine, Innsbruch, Austria
  • 6Faculty for Chemistry, Physics and Biosciences, Biology/Ecology, Freiburg, Germany
  • 7Department of Applied Ecology and Phycology, Institute of Biological Sciences, University of Rostock, Rostock, Germany
  • 8Interdisciplinary Faculty, Department of Maritime Systems, University of Rostock, Department of Applied Ecology and Phycology, Institute of Biological Sciences, University of Rostock, Rostock, Germany

The final, formatted version of the article will be published soon.

Introduction: A filamentous green alga forming significant biomass on twigs and needles was observed to have increased invasively in Denmark in recent decades. It was particularly abundant in coniferous plantations in western parts of Denmark that experience the highest modelled concentration of atmospheric nitrogen deposition. However, its species identity and taxonomy remained unknown. Material and methods: Selected algal samples from various substrates were analyzed for their ribosomal DNA sequences, metagenomic, and biochemical compounds (polyols and mycosporine-like amino acids (MAAs)). Results: Phylogenetic analyses revealed the alga’s position within the Trebouxiophyceae (Chlorophyta), forming an independent lineage within Apatococcus. Though it was associated with various other Trebouxiophyceae species, the metagenome showed exceptionally high coverage of the Apatococcus contigs, proving its predominance, consistent with the amplicon-based approach. The low molecular weight carbohydrates, arabitol, erythritol, and trehalose – with erythritol displaying the highest concentrations – were recovered. The presence of erythritol provided chemotaxonomic support for the classification in Apatococcus. Additionally, a unique UV-absorbing mycosporine amino acid (MAA), likely new for the Trebouxiophyceae, was found. The species is described here as A. ammoniophilus, and the observed morphological features leave no doubt that it has been recorded from Denmark more than a hundred years ago. Morphological features are shared with its closer relatives, such as the presence of a ring of particles surrounding the nucleus and the formation of two-celled units. Discussion: The presence of low molecular weight carbohydrates and the unique MAA in A. ammoniophilus well explain the biochemical basis for its aeroterrestrial lifestyle, as these organic compounds protect against desiccation and UV-radiation, respectively. Even though the genotype of A. ammoniophilus has also been found in inconspicuous biofilms devoid of filamentous stages on various substrates with presumably low ammonia deposition, the very invasive colonization in recent decades in western Denmark is assumed to be due to ammonia deposition. Consequently, A. ammoniophilus is suggested to be a potential biological indicator of air borne nitrogen deposition. A possible connection between filamentous growth and nitrogen accumulation needs further investigation, including culture experiments.

Keywords: terrestrial epiphytic, amplicon-based metabarcoding, Bioindication, Metagenomics, Hormidium crenulatum, Klebsormidium, phylogenetic analyses, mycosporinelike amino acids (MAA)

Received: 23 May 2025; Accepted: 02 Jul 2025.

Copyright: © 2025 Søchting, Friedl, Moestrup, Grewe, Sun, Çakır, Ganzera, Glaser, Heesch, Hammerle, Nimptsch, Olberg and Karsten. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Ulrik Søchting, Section Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark

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