Your new experience awaits. Try the new design now and help us make it even better

ORIGINAL RESEARCH article

Front. Microbiol.

Sec. Microorganisms in Vertebrate Digestive Systems

This article is part of the Research TopicNew Insights into the Avian Gut MicrobiomesView all 12 articles

Revealing Dietary Habits and Intestinal Microbiome Composition of the Beijing Swift (Apus apus pekinensis) through Regurgitated Pellets and Fecal Samples

Provisionally accepted
Bojun  WangBojun Wang1Yaqiong  ZhangYaqiong Zhang1Jie  LiJie Li1Mengwei  WuMengwei Wu1Yingliang  ShiYingliang Shi1Xiangnan  SunXiangnan Sun1Xin  XiaoXin Xiao1Pan  ZhangPan Zhang1Yang  ShiYang Shi1Yimeng  LiYimeng Li2*Hengjiu  TianHengjiu Tian1*
  • 1Beijing Wildlife Rescue and Rehabilitation Center, Beijing, China
  • 2Natural History Museum of China, Beijing, China

The final, formatted version of the article will be published soon.

The Beijing swift, an important insectivorous bird, is a key protected wild animal in Beijing. Current research on this species primarily focuses on distribution surveys and population dynamics, while systematic studies on its diet and intestinal microbiome composition remain lacking, a knowledge gap that constrains in-depth understanding of its ecological adaptability. This study integrated DNA barcoding and high-throughput 16S rRNA gene sequencing to systematically analyze regurgitated pellets and fecal samples from ringed and rescued individuals, revealing the following findings: the dietary composition primarily encompasses insects from five orders, Diptera, Coleoptera, Hemiptera, Hymenoptera and Lepidoptera, with significant differences observed between adults and nestlings. Dominant intestinal bacterial phyla included Proteobacteria, Firmicutes, Bacteroidota, and Actinobacteriota. Correlation network analysis indicated that Stenotrophomonas, Aminobacter, etc., exhibit extensive mutually promotive interactions with other bacteria, suggesting their potential roles as core functional bacterial communities in the intestine. This research provides the first evidence of dietary differentiation patterns and intestinal microbial composition characteristics of Beijing swifts, providing key foundational data for assessing its survival and adaptation mechanisms. It is highly significant for developing scientific rescue strategies and conservation initiatives.

Keywords: Apus apus pekinensis, Regurgitated pellets, Fecal samples, dietary habits, Intestinal Microbiome

Received: 27 Aug 2025; Accepted: 18 Nov 2025.

Copyright: © 2025 Wang, Zhang, Li, Wu, Shi, Sun, Xiao, Zhang, Shi, Li and Tian. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence:
Yimeng Li, liyimeng@nnhm.org.cn
Hengjiu Tian, hengjiutian@126.com

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.