Frontiers in Microbiology

Original Research

Published on 05 Feb 2025

Electroacupuncture alleviates functional constipation by upregulating host-derived miR-205-5p to modulate gut microbiota and tryptophan metabolism

in Microorganisms in Vertebrate Digestive Systems

Lu Wang
Menghan Xi
Wei Cao
Haiyan Qin
Di Qin
Shuai Chen
Siyuan Zhou
Yujun Hou
Ying Chen
Xianjun Xiao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1517018

1,476 views

Systematic Review

Published on 05 Feb 2025

Systematic review of bidirectional interaction between gut microbiome, miRNAs, and human pathologies

in Systems Microbiology

Lorenzo Drago
Luigi Regenburgh De La Motte
Loredana Deflorio
Delia Francesca Sansico
Michela Salvatici
Emanuele Micaglio
Manuele Biazzo
Fabiana Giarritiello

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1540943

3,117 views

Original Research

Published on 04 Feb 2025

High throughput single cell metagenomic sequencing with semi-permeable capsules: unraveling microbial diversity at the single-cell level in sewage and fecal microbiomes

in Microbiotechnology

Meilee Ling
Judit Szarvas
Vaida Kurmauskaitė
Vaidotas Kiseliovas
Rapolas Žilionis
Baptiste Avot
Patrick Munk
Frank M. Aarestrup

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1516656

3,647 views

Original Research

Published on 04 Feb 2025

Profiling the diversity of the village chicken faecal microbiota using 16S rRNA gene and metagenomic sequencing data to reveal patterns of gut microbiome signatures

in Microorganisms in Vertebrate Digestive Systems

Mxolisi Nene
Nokuthula Winfred Kunene
Rian Pierneef
Khanyisile Hadebe

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1487595

1,932 views

Original Research

Published on 30 Jan 2025

Macronutrient balance determines the human gut microbiome eubiosis: insights from in vitro gastrointestinal digestion and fermentation of eight pulse species

in Microbial Symbioses

Da Bin Lee
In Seon Hwang

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1512217

1,594 views
2 citations

Original Research

Published on 29 Jan 2025

The gut microbiota regulates diabetic retinopathy in adult rats

in Microorganisms in Vertebrate Digestive Systems

Jueyu Hou
Zhongping Lv
Yujiao Wang
Danian Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1479792

1,440 views

Review

Published on 29 Jan 2025

Unveiling the rhizosphere microbiome of Dendrobium: mechanisms, microbial interactions, and implications for sustainable agriculture

in Microbe and Virus Interactions with Plants

Surendra Sarsaiya
Archana Jain
Ranjan Singh
Qihai Gong
Qin Wu
Jishuang Chen
Jingshan Shi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1531900

1,691 views

Original Research

Published on 29 Jan 2025

Age and diet affect self-resilience of intestinal microbiome in mice

in Microbial Symbioses

Chenyi Shao
Shenmin Chen
Huan Yang
Mufan Li
Yinhui Liu
Shu Wen
Jing Xiao
Li Tang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1507396

1,085 views

Original Research

Published on 29 Jan 2025

Variations in rumen microbiota and host genome impacted feed efficiency in goat breeds

in Microorganisms in Vertebrate Digestive Systems

Alaa Emara Rabee
Ibrahim Abou-souliman
Ahmed I. Yousif
Mebarek Lamara
Mohamed A. El-Sherbieny
Eman Ali Elwakeel
Ahmed M. Sallam

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1492742

1,885 views
2 citations

Review

Published on 28 Jan 2025

Gut dysbiosis in primary sarcopenia: potential mechanisms and implications for novel microbiome-based therapeutic strategies

in Microorganisms in Vertebrate Digestive Systems

Wei Yang
Si-Cong Si
Wei-Hua Wang
Jing Li
Yi-Xin Ma
Huan Zhao
Jia Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1526764

2,212 views
1 citation

Original Research

Published on 24 Jan 2025

Unveiling early-life microbial colonization profile through characterizing low-biomass maternal-infant microbiomes by 2bRAD-M

in Systems Microbiology

Shuwen Hou
Yuesong Jiang
Feng Zhang
Tianfan Cheng
Dan Zhao
Jilong Yao
Ping Wen
Lijian Jin
Shi Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1521108

1,736 views

Review

Published on 22 Jan 2025

Deep learning in microbiome analysis: a comprehensive review of neural network models

in Systems Microbiology

Piotr Przymus
Krzysztof Rykaczewski
Adrián Martín-Segura
Jaak Truu
Enrique Carrillo De Santa Pau
Mikhail Kolev
Irina Naskinova
Aleksandra Gruca
Alexia Sampri
Marcus Frohme

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1516667

5,928 views
1 citation

Systematic Review

Published on 22 Jan 2025

Human papillomavirus, vaginal microbiota and metagenomics: the interplay between development and progression of cervical cancer

in Infectious Agents and Disease

Paul Leon-Gomez
Vanessa I. Romero

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1515258

3,227 views
1 citation

Original Research

Published on 15 Jan 2025

Superiority of native seed core microbiomes in the suppression of bacterial wilt disease

in Microbial Symbioses

Yanling Dong
Jie Gong
Lei Yang
Qipeng Jiang
Chengzhi Wen
Jidan Zhang
Ruiyu Yang
Yao Wang
Yuhao Dai
Gui Gao

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1506059

978 views

Review

Published on 15 Jan 2025

The temperate forest phyllosphere and rhizosphere microbiome: a case study of sugar maple

in Terrestrial Microbiology

Morgane Enea
Jacob Beauregard
Tonia De Bellis
Maria Faticov
Isabelle Laforest-Lapointe

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1504444

1,951 views

Original Research

Published on 15 Jan 2025

Characterizing the microbiome recruited by the endangered plant Firmiana danxiaensis in phosphorus-deficient acidic soil

in Terrestrial Microbiology

Jiayu Li
Guangda Tang
Hongwei Liu
Xiaoying Luo
Juntao Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1439446

1,156 views
1 citation