Frontiers in Microbiology | Systems Microbiology

Original Research

Published on 06 Mar 2024

The proteome of bacterial membrane vesicles in Escherichia coli—a time course comparison study in two different media

in Systems Microbiology

Mia S. C. Yu
Dapi Menglin Chiang
Marlene Reithmair
Agnes Meidert
Florian Brandes
Gustav Schelling
Christina Ludwig
Chen Meng
Benedikt Kirchner
Christian Zenner

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1361270

4,683 views
4 citations

Review

Published on 05 Mar 2024

Role of the gut microbiota in the pathogenesis of endometriosis: a review

in Systems Microbiology

Cuishan Guo
Chiyuan Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1363455

16,946 views
13 citations

Review

Published on 05 Mar 2024

Metabolites: a converging node of host and microbe to explain meta-organism

in Systems Microbiology

Nabarun Chakraborty

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1337368

3,131 views
9 citations

Original Research

Published on 05 Mar 2024

Metagenomic evidence for antibiotic-associated actinomycetes in the Karamay Gobi region

in Systems Microbiology

Shuai Yang
Wei Zhang
Bo Yang
Xin Feng
Yiyang Li
Xiaolin Li
Qin Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1330880

2,879 views
5 citations

Original Research

Published on 01 Mar 2024

An optimized culturomics strategy for isolation of human milk microbiota

in Systems Microbiology

Fan Wang
Lingmin Yu
Yuting Ren
Qianwen Zhang
Shanshan He
Minlei Zhao
Zhili He
Qi Gao
Jianguo Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1272062

4,269 views
10 citations

Methods

Published on 27 Feb 2024

A simple protocol for cultivating the bacterivorous soil nematode Caenorhabditis elegans in its natural ecology in the laboratory

in Systems Microbiology

Rocel Amor Indong
Jong Min Park
Jin-Kyung Hong
Eun Sun Lyou
Taeman Han
Jong Kwang Hong
Tae Kwon Lee
Jin I. Lee

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1347797

4,270 views
1 citation

Original Research

Published on 21 Feb 2024

The bacterial and archaeal communities of flies, manure, lagoons, and troughs at a working dairy

in Systems Microbiology

Tawni L. Crippen
Dongmin Kim
Toni L. Poole
Sonja L. Swiger
Robin C. Anderson

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1327841

4,194 views
4 citations

Original Research

Published on 20 Feb 2024

High-throughput screening of the effects of 90 xenobiotics on the simplified human gut microbiota model (SIHUMIx): a metaproteomic and metabolomic study

in Systems Microbiology

Victor Castañeda-Monsalve
Laura-Fabienne Fröhlich
Sven-Bastiaan Haange
Masun Nabhan Homsi
Ulrike Rolle-Kampczyk
Qiuguo Fu
Martin von Bergen
Nico Jehmlich

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1349367

6,499 views
9 citations

Original Research

Published on 15 Feb 2024

Explainable artificial intelligence for microbiome data analysis in colorectal cancer biomarker identification

in Systems Microbiology

Pierfrancesco Novielli
Donato Romano
Michele Magarelli
Pierpaolo Di Bitonto
Domenico Diacono
Annalisa Chiatante
Giuseppe Lopalco
Daniele Sabella
Vincenzo Venerito
Pasquale Filannino

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1348974

9,382 views
27 citations

Original Research

Published on 15 Feb 2024

Investigating causal associations among gut microbiota, metabolites, and psoriatic arthritis: a Mendelian randomization study

in Systems Microbiology

Xiao Xu
Lin-yun Wu
Shu-yun Wang
Min Yan
Yuan-Hong Wang
Li Li
Zhi-ling Sun
Ji-Xiang Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1287637

6,382 views
3 citations

Original Research

Published on 14 Feb 2024

Discovery of novel replication proteins for large plasmids in cyanobacteria and their potential applications in genetic engineering

in Systems Microbiology

Kazuma Ohdate
Minori Sakata
Kaisei Maeda
Yutaka Sakamaki
Kaori Nimura-Matsune
Ryudo Ohbayashi
Wolfgang R. Hess
Satoru Watanabe

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1311290

4,386 views
5 citations

Methods

Published on 12 Feb 2024

Unraveling the microbiome-metabolome nexus: a comprehensive study protocol for personalized management of Behçet’s disease using explainable artificial intelligence

in Systems Microbiology

Sabina Tangaro
Giuseppe Lopalco
Daniele Sabella
Vincenzo Venerito
Pierfrancesco Novielli
Donato Romano
Alessia Di Gilio
Jolanda Palmisani
Gianluigi de Gennaro
Pasquale Filannino

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1341152

2,448 views
2 citations

Original Research

Published on 09 Feb 2024

Effects of type of substrate and dilution rate on fermentation in serial rumen mixed cultures

in Systems Microbiology

Emilio M. Ungerfeld
Nathaly Cancino-Padilla
Nelson Vera-Aguilera
M. Carolina Scorcione
Marcelo Saldivia
Lorena Lagos-Pailla
Milena Vera
Cristián Cerda
Camila Muñoz
Natalie Urrutia

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1356966

3,049 views
1 citation

Editorial

Published on 09 Feb 2024

Editorial: Risk assessment of mycotoxins on metabolism, immunity, and intestinal health

in Systems Microbiology

Einar Ringø
Xiaoyum He
Xiao Li Shen
Jing Jin
Fuguo Xing

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1367261

1,460 views
1 citation

Original Research

Published on 08 Feb 2024

Assessing probiotic viability in mixed species yogurt using a novel propidium monoazide (PMAxx)-quantitative PCR method

in Systems Microbiology

Tlaleo A. Marole
Thulani Sibanda
Elna M. Buys

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1325268

3,436 views
5 citations

Original Research

Published on 08 Feb 2024

Whole genome sequencing and characterization of Pantoea agglomerans DBM 3797, endophyte, isolated from fresh hop (Humulus lupulus L.)

in Systems Microbiology

Petra Patakova
Maryna Vasylkivska
Karel Sedlar
Katerina Jureckova
Matej Bezdicek
Petra Lovecka
Barbora Branska
Petr Kastanek
Karel Krofta

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1305338

6,064 views