Frontiers in Microbiomes | Host and Microbe Associations

Original Research

Published on 28 Jan 2026

The influence of breast milk microbiota from HIV-infected women on infant gut microbiota colonization within the first two weeks of life

in Host and Microbe Associations

Privilege Tendai Munjoma
Jacqueline Wyss
Arthur John Mazhandu
Sebastian Bruno Ulrich Jordi
Stephanie Christine Ganal-Vonarburg
Rutendo Zinyama-Gutsire
Leolin Katsidzira
Bahtiyar Yilmaz
Benjamin Misselwitz
Kerina Duri

Frontiers in Microbiomes

doi 10.3389/frmbi.2026.1611702

361 views

Original Research

Accepted on 22 Jan 2026

Trichoderma combined with palm kernel shell biochar promotes root health and rhizosphere biodiversity in young oil palm seedlings infected with Ganoderma boninense

in Host and Microbe Associations

Christinavimala Supramaniam
Saran Anandan
Asgar Ali
Anurita Selvarajoo

Frontiers in Microbiomes

Original Research

Accepted on 13 Jan 2026

Microbiota Disparities in Stool, Oral Swabs, and Saliva Between Control and Early-Onset Colorectal Neoplasia Groups: An Exploratory Analysis

in Host and Microbe Associations

Ji Eun Na
Yong Eun Park
Tae-Oh Kim

Frontiers in Microbiomes

Review

Published on 07 Jan 2026

The gut–brain connection: microbes’ influence on mental health and psychological disorders

in Host and Microbe Associations

Pegah Ataei
Hamidreza Kalantari
Tamara S. Bodnar
Raymond J. Turner

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1701608

2,452 views

Original Research

Published on 22 Dec 2025

Microbial dysbiosis in melasma through community profiling

in Host and Microbe Associations

Yugandhar Reddy B.S
Chandraprabha Doraiswamy
Deepshikha Singh
Nagalakshmi Surendra
Aparna Damle
Maitreyee Dutta
Savitha Rajkumar
Brian Potterf
Arindam Roy
Bharat Cheviti

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1505565

1,602 views

Review

Published on 05 Dec 2025

Understanding the role of oral and vaginal microbiomes in HPV-related cervical, head, and neck cancers: knowledge gaps and feasibility in Sub-Saharan Africa

in Host and Microbe Associations

Hélène Eya Kamassa
Gnatoulma Katawa
Abiola Isawumi
Charles Olwal
Winfried Seth Gbewonyo
Peter Kojo Quashie
Yaw Bediako

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1576394

965 views

Original Research

Published on 11 Nov 2025

Active fungal infections alter the respiratory microbiome profiles of Mayo Clinic Arizona patients

in Host and Microbe Associations

Daniel R. Kollath
Kathrine McAulay
Emily A. Higgins Keppler
Kenta S. Reilly
Kenneth K. Sakata
Bridget M. Barker
Thomas E. Grys

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1699912

942 views

Original Research

Published on 14 Oct 2025

Interplay between host genetics and gut microbiome composition in the Japanese population

in Host and Microbe Associations

David Ortega-Reyes
Tadashi Takeuchi
Yusuke Ogata
Takuro Iwami
Wataru Suda
Tetsuya Kubota
Naoto Kubota
Takashi Kadowaki
Kohei Tomizuka
Hiroshi Ohno

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1635907

2,641 views

Original Research

Published on 10 Oct 2025

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

in Host and Microbe Associations

Leire Urrutia-Angulo
José Luis Lavín
Beatriz Oporto
Gorka Aduriz
Ana Hurtado
Medelin Ocejo

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1672438

1,589 views

Original Research

Published on 06 Oct 2025

Implications of cyclophosphamide, methotrexate, and 5-fluorouracil chemotherapy on hippocampal-dependent cognition and gut microbiome

in Host and Microbe Associations

Christa Corley
Chase Swinton
Taylor McElory
Bhavana Sridharan
Justin Thomas
Bailey Cronin
Vijayalakshmi Sridharan
Michael S. Robeson
Antiño R. Allen

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1486757

1,328 views
1 citation

Original Research

Published on 15 Sep 2025

The co-application of arbuscular mycorrhizal fungus and Trichoderma on anthracnose disease in common vetch

in Host and Microbe Associations

Jia He
Faxi Li
Rongchun Zheng
Meiting Bai
Ping Wang
Tingyu Duan

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1654549

829 views

Editorial

Published on 15 Sep 2025

Editorial: Live Biotherapeutic Products: where are we?

in Host and Microbe Associations

Glenn Tillotson

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1664282

1,241 views
1 citation

Brief Research Report

Published on 11 Sep 2025

Shk (a histidine kinase) positively regulates the virulence of Ralstonia solanacearum strain GMI1000

in Host and Microbe Associations

Dexing Xue
Danyu Kong

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1605947

966 views

Opinion

Published on 05 Sep 2025

Position statement of the Microbiota International Clinical Society

in Host and Microbe Associations

Chiara Maria Palazzi
Gaia Ciampaglia
Beatrice Binato
Mirko Ragazzini
Alexander Bertuccioli
Ilaria Cavecchia
Mariarosaria Matera
Massimiliano Cazzaniga
Giordano Bruno Zonzini
Nicola Zerbinati

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1657750

2,848 views
2 citations

Review

Published on 01 Sep 2025

The microbiome and lung cancer: microbial effects on host immune responses and treatment outcomes

in Host and Microbe Associations

Alexis Bailey
Kerstin K. Leuther
Lary A. Robinson

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1606551

2,136 views
1 citation

Original Research

Published on 01 Sep 2025

Microbiome dynamics in tank- and pond-reared Genetically Improved Farmed Tilapia (GIFT)

in Host and Microbe Associations

Jérôme Delamare-Deboutteville
Mahirah Mahmuddin
Han Ming Gan
Charles Rodde
Laura Khor
David Verner-Jeffreys
Chadag Vishnumurthy Mohan
John A. H. Benzie

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1567816

1,804 views

Perspective

Published on 30 Jul 2025

Beyond antibiotics: leveraging microbiome diversity to combat antimicrobial resistance

in Host and Microbe Associations

Ali Al-Kuwari
Hamad Al-Karbi
Abdulla Al-Khuzaei
Dounia Baroudi
Ghizlane Bendriss

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1618175

2,015 views

Editorial

Published on 29 Jul 2025

Editorial: Gut microbiota and its importance on human health - the need for reliable measurements to assess the microbial gut function and its correlated pathologies

in Host and Microbe Associations

Lilian Terezinha Costa

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1657144

935 views

Original Research

Published on 28 Jul 2025

Obesity reprograms the normal pancreas and pancreatic cancer microbiome in mice and humans

in Host and Microbe Associations

Raquel Santana da Cruz
Shravanthy Suguru
Sara P. C. Paiva
Ijeoma Nwugwo
Bhaskar Kallakury
Benjamin A. Weinberg
Katherine L. Cook
Sonia de Assis

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1543144

1,745 views

Original Research

Published on 22 Jul 2025

Modeling the zebrafish gut microbiome’s resistance and sensitivity to climate change and parasite infection

in Host and Microbe Associations

Michael J. Sieler
Colleen E. Al-Samarrie
Kristin D. Kasschau
Mike L. Kent
Thomas J. Sharpton

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1605168

1,374 views
1 citation

Perspective

Published on 11 Jul 2025

Understanding of the effect of microbiome on human health: a chemical process engineering perspective

in Host and Microbe Associations

Xiao Dong Chen

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1605814

2,336 views

Brief Research Report

Published on 09 Jul 2025

Prevotella as the main driver for the association between dairy farming and human gut microbiome composition

in Host and Microbe Associations

Tryntsje Cuperus
Jolanda Kool
David Boverhoff
Kees van der Ark
Marieke Opsteegh
Susana Fuentes

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1612922

1,806 views

Original Research

Published on 01 Jul 2025

Microbial hallmarks of the respiratory tract in lung cancer: a meta-analysis

in Host and Microbe Associations

Bin Zhu
Stephanie S. McHale
Michelle Van Scoyk
Gregory Riddick
Pei-Ying Wu
Chu-Fang Chou
Katherine Y. Tossas
Ching-Yi Chen
Robert A. Winn

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1589686

1,434 views

Review

Published on 27 Jun 2025

Chemistry, manufacturing, and controls for live microbial products: addressing classification challenges and enhancing process validation

in Host and Microbe Associations

Ralph Slijkerman
Rob van Dijk
Nasser Mohieddin
Ivana Ciarlante
Antal de Jong
Moira Monika Schuler

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1569348

2,924 views
1 citation

103 articles

articles

The influence of breast milk microbiota from HIV-infected women on infant gut microbiota colonization within the first two weeks of life

Trichoderma combined with palm kernel shell biochar promotes root health and rhizosphere biodiversity in young oil palm seedlings infected with Ganoderma boninense

Microbiota Disparities in Stool, Oral Swabs, and Saliva Between Control and Early-Onset Colorectal Neoplasia Groups: An Exploratory Analysis

The gut–brain connection: microbes’ influence on mental health and psychological disorders

Microbial dysbiosis in melasma through community profiling

Understanding the role of oral and vaginal microbiomes in HPV-related cervical, head, and neck cancers: knowledge gaps and feasibility in Sub-Saharan Africa

Active fungal infections alter the respiratory microbiome profiles of Mayo Clinic Arizona patients

Interplay between host genetics and gut microbiome composition in the Japanese population

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

Implications of cyclophosphamide, methotrexate, and 5-fluorouracil chemotherapy on hippocampal-dependent cognition and gut microbiome

The co-application of arbuscular mycorrhizal fungus and Trichoderma on anthracnose disease in common vetch

Editorial: Live Biotherapeutic Products: where are we?

Shk (a histidine kinase) positively regulates the virulence of Ralstonia solanacearum strain GMI1000

Position statement of the Microbiota International Clinical Society

The microbiome and lung cancer: microbial effects on host immune responses and treatment outcomes

Microbiome dynamics in tank- and pond-reared Genetically Improved Farmed Tilapia (GIFT)

Beyond antibiotics: leveraging microbiome diversity to combat antimicrobial resistance

Editorial: Gut microbiota and its importance on human health - the need for reliable measurements to assess the microbial gut function and its correlated pathologies

Obesity reprograms the normal pancreas and pancreatic cancer microbiome in mice and humans

Modeling the zebrafish gut microbiome’s resistance and sensitivity to climate change and parasite infection

Understanding of the effect of microbiome on human health: a chemical process engineering perspective

Prevotella as the main driver for the association between dairy farming and human gut microbiome composition

Microbial hallmarks of the respiratory tract in lung cancer: a meta-analysis

Chemistry, manufacturing, and controls for live microbial products: addressing classification challenges and enhancing process validation