Microbiome-Driven Strategies for Alleviation of Biotic and Abiotic Stresses in Agriculture

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ORIGINAL RESEARCH

Published on 15 Jul 2026

Integrated metagenomic and metabolomic insights into microbial metabolic reprogramming in the rhizosphere of the invasive plant Praxelis clematidea under low-temperature stress

Xiaowen Liu
Wenzhi Cheng
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Wubliker Dessie
Chengmei Qi
Muhammad Ayaz
Xiangqin Xu

doi 10.3389/fmicb.2026.1852122

637 views

SYSTEMATIC REVIEW

Published on 30 Jun 2026

Integrating multiomics driven bioengineering and regenerative approaches to improve soil health and productivity in climate adaptive soybean farming on problematic soils

Fairus Hisanah Hibatullah
Emma Trinurani Sofyan
Anne Nurbaity
Tualar Simarmata

doi 10.3389/fmicb.2026.1821982

759 views

ORIGINAL RESEARCH

Published on 19 May 2026

Effect of alfalfa varieties with different resistance to alfalfa Verticillium wilt on microbial communities in rhizosphere soil and plants

Li-Li Zhang
Yan-Zhong Li

doi 10.3389/fmicb.2026.1739219

1,167 views

ORIGINAL RESEARCH

Published on 29 Apr 2026

Overcoming salinity barriers: granular straw promotes carbon cycling in saline soils by reshaping microbial community assembly

Ting Fan
Kexin Hu
Shaoqi Xue
Pengfei Li
Yulin Zhang
Xudong Wang

doi 10.3389/fmicb.2026.1782607

1,006 views

ORIGINAL RESEARCH

Published on 23 Mar 2026

Differential responses of crop pollen microbial communities to insect visitation and host identity: fungi are more sensitive than bacteria

Yage Li
Bo Wang
Congcong Lan
Panfeng Dai
Lina Zhao
Mingming Zhang
Qiang Fang

doi 10.3389/fmicb.2026.1789970

1,148 views

ORIGINAL RESEARCH

Published on 04 Mar 2026

Wheat mycobiome dynamics driven by interseasonal crop-crop transfer and Fusarium head blight

Briana K. K Whitaker
Kristi Gdanetz
Martha Marie Marie Vaughan
Susan McCormick
Talon Becker

doi 10.3389/fmicb.2026.1778987

1,883 views

ORIGINAL RESEARCH

Published on 03 Feb 2026

Divergent sucker-corm endophytic microbiota underpins the progressive decline of Fusarium-wilt incidence in resistant bananas across ratoon cycles

Sainan Xiang
Dandan Tian
Jiahui Chen
Zhangfei He
Liping Wei
Liuyan Qin
Chaosheng Li
Baoshen Li

doi 10.3389/fmicb.2026.1676292

991 views

ORIGINAL RESEARCH

Published on 17 Dec 2025

Rhizosphere legacy of leaf-diseased rice and its impact on next generation

Léa Jobert
Vichny Vicheth
Pierre Czernic
Malyna Suong
Gilles Béna
Lionel Moulin

doi 10.3389/fmicb.2025.1677271

2,216 views
1 citation

ORIGINAL RESEARCH

Published on 17 Oct 2025

Transcriptomic and metabolomic analyses unravel the different pathogenic mechanisms of Ustilaginoidea virens in indica and japonica rice

Rongtao Fu
Yu Chen
Cheng Chen
Jian Wang
Liyu Zhao
Daihua Lu

doi 10.3389/fmicb.2025.1680221

2,571 views
1 citation

ORIGINAL RESEARCH

Published on 25 Sep 2025

Endophytic bacteria Priestia megaterium 170T-4 improves soybean salt tolerance through regulation of ion homeostasis and phytohormone signaling pathways

Shutian Hua
Ruiyao Liu
Zhe Li
Han Zheng
Yanfen Zheng
Youqiang Wang
Cheng-Sheng Zhang
Ziyan Wang
Mingguo Jiang

doi 10.3389/fmicb.2025.1676456

4,640 views
3 citations

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Frontiers in Microbiology

Microbe and Virus Interactions with Plants

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Articles

Integrated metagenomic and metabolomic insights into microbial metabolic reprogramming in the rhizosphere of the invasive plant Praxelis clematidea under low-temperature stress

Integrating multiomics driven bioengineering and regenerative approaches to improve soil health and productivity in climate adaptive soybean farming on problematic soils

Effect of alfalfa varieties with different resistance to alfalfa Verticillium wilt on microbial communities in rhizosphere soil and plants

Overcoming salinity barriers: granular straw promotes carbon cycling in saline soils by reshaping microbial community assembly

Differential responses of crop pollen microbial communities to insect visitation and host identity: fungi are more sensitive than bacteria

Wheat mycobiome dynamics driven by interseasonal crop-crop transfer and Fusarium head blight

Divergent sucker-corm endophytic microbiota underpins the progressive decline of Fusarium-wilt incidence in resistant bananas across ratoon cycles

Rhizosphere legacy of leaf-diseased rice and its impact on next generation

Transcriptomic and metabolomic analyses unravel the different pathogenic mechanisms of Ustilaginoidea virens in indica and japonica rice

Endophytic bacteria Priestia megaterium 170T-4 improves soybean salt tolerance through regulation of ion homeostasis and phytohormone signaling pathways

Frontiers in Microbiology

Microbe and Virus Interactions with Plants