Impact Factor 4.137
2018 JCR, Web of Science Group 2019

Frontiers journals are at the top of citation and impact metrics

Original Research ARTICLE Provisionally accepted The full-text will be published soon. Notify me

Front. Oncol. | doi: 10.3389/fonc.2019.00612

Methylenetetrahydrofolate Reductase Gene C677T and A1298C Polymorphic Sequence Variations Influences the Susceptibility to Chronic Myeloid Leukemia in Kashmiri Population.

 Zafar A. Shah1*,  Shahid M. Baba1, Khushboo Kanna2, Arshad A. Pandith1, Javeed Rasool1, Sajad A. Geelani1,  Rafia A. Baba1, Shajrul Amin2 and Gul Mohammad1
  • 1Sher-I-Kashmir Institute of Medical Sciences, India
  • 2University of Kashmir, India

Background
Methylenetetrahydrofolate reductase (MTHFR) gene is a crucial regulator of folate metabolism and its two prominent polymorphic variants C677T and A1298C lead to decreased MTHFR enzyme activity.
Aim of the study
We planned this case–control study based on numerous studies supporting the association of MTHFR polymorphisms (C677T and A1298C) with CML risk in different ethnic populations. Therefore, the influence of these polymorphisms on CML susceptibility among Kashmiri population (North India) was investigated.
Material & Methods
Polymerase chain reaction/restriction fragment length polymorphism technique was employed for genotyping MTHFR C677T and A1298C SNP’s in 125 CML patients as against 150 age and gender matched healthy controls.
Results
A significant difference was observed in frequency of 677CT genotype between cases and controls [46.4% vs 27.3% (p=0.0005)]. Similarly combined 677CT+TT genotype showed significant difference between cases and controls [50.4% vs 28.6% (p=0.0002)]. Both MTHFR 677CT and 677CT+TT genotypes imposed greater than 2 fold risk of developing CML (OR=2.4, 95%CI: 1.46-4.05; OR=2.5, 95%CI: 1.53-4.16). In case of A1298C SNP, the frequency of 1298AC genotype was higher in controls (64.0%) as compared to CML cases (48.8%) (p=0.04) and imparted a significant protective role from CML predisposition. Furthermore, haplotype analysis revealed only ‘677CT/1298AA’ haplotype significantly increased the risk of CML predisposition [(p=0.008) (OR = 3.2, 95% CI: 1.3-7.4)].
Conclusion
We conclude that both MTHFR C677T and A1298C polymorphisms act as important genetic modifiers for CML risk in Kashmiri population, where C677T SNP strongly increases the risk of CML while as A1298C SNP has a protective effect.

Keywords: BCR / ABL, RFLP, PCR, MTHFR, Kashmir, SKIMS

Received: 01 Mar 2019; Accepted: 21 Jun 2019.

Edited by:

Massimo Breccia, Sapienza University of Rome, Italy

Reviewed by:

Elias H. Atta, Brazilian National Cancer Institute (INCA), Brazil
Sara Galimberti, University of Pisa, Italy  

Copyright: © 2019 Shah, Baba, Kanna, Pandith, Rasool, Geelani, Baba, Amin and Mohammad. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Prof. Zafar A. Shah, Sher-I-Kashmir Institute of Medical Sciences, Srinagar, India, bshahid007@gmail.com