- 1Division of Medical Safety Science, Faculty of Pharmaceutical Sciences, Sanyo-Onoda City University, Sanyo-Onoda, Japan
- 2Pharmacy Department, Yamaguchi University Hospital, Ube, Japan
- 3Department of Pharmacy, Yamaguchi Prefectural Grand Medical Center, Hofu, Japan
- 4Division of Medical Safety Science, Graduate School of Pharmaceutical Sciences, Sanyo-Onoda City University, Sanyo-Onoda, Japan
Introduction: Fibrates are effective triglyceride-lowering drugs, but they may affect bile acid metabolism, raising concerns about biliary adverse drug events (ADEs).
Objective: In this study, we used spontaneous reporting system databases to evaluate the association between fibrates and biliary ADEs. This study has been reported in accordance with the Reporting of a Disproportionality Analysis for Drug Safety Signal Detection Using Individual Case Safety Reports in PharmacoVigilance guidelines.
Methods: We used data from the Japanese Adverse Drug–Event Report (JADER) and the U.S. Food and Drug Administration Adverse Event Reporting System (FAERS) databases. The signal detection metrics employed were reporting odds ratio (ROR), proportional reporting ratio, Bayesian confidence propagation neural network, and Gamma–Poisson Shrinker. We also conducted stratified disproportionality and time-to-onset analyses.
Results: We identified 58 and 260 unique individual case safety reports from the JADER and FAERS databases, respectively. Primary disproportionality analysis of all fibrates in the JADER dataset revealed an ROR of 3.74 [2.88–4.85]. All other signal detection metrics also exhibited statistically significant associations. In the stratified disproportionality analysis, pemafibrate showed significant signals across all strata, confirming the robustness of the signal. In the Weibull analysis for pemafibrate, the shape parameter (β) was 1.59 [1.17–2.56], indicating an increasing trend in ADE reporting with continued pemafibrate use.
Conclusion: A significant signal for biliary ADEs was detected for fibrates in both databases, with a particularly consistent association for pemafibrate. Regular hepatobiliary monitoring and individualized patient management are recommended.
1 Introduction
Fibrates are widely used to lower triglyceride levels. Their mechanism of action involves the activation of peroxisome proliferator–activated receptors (PPARs), a family of transcription factors in the nuclear hormone receptor superfamily (Staels et al., 1998). Of the three PPAR subtypes (α, β/δ, γ), PPARα primarily mediates the lowering of triglyceride levels (Staels et al., 1998).
PPARα suppresses the activity of cholesterol 7α-hydroxylase (CYP7A1) and sterol 27-hydroxylase (CYP27A1), the rate-limiting enzymes in bile acid synthesis (Post et al., 2001; Ghonem et al., 2015), leading to a decrease in bile acid production and the likely development of biliary tract–related adverse effects, including cholelithiasis (Post et al., 2001). A case series suggested an association between fibrates use and cholelithiasis (Caroli-Bosc et al., 2001). A 52-week Phase III trial of pemafibrate reported a cholelithiasis incidence of 5.3% (Kowa Co.ltd., 2024). Pemafibrate is a selective PPARα modulator approved in Japan in 2017 (Kowa Co.ltd., 2024).
Evidence linking fibrates to biliary adverse drug events (ADEs) remains limited. Clinical trials are conducted under controlled conditions and may not reflect real-world practice (Singh and Loke, 2012). Post-marketing, high-quality prospective studies on biliary ADEs are scarce, particularly in older adults and individuals on multiple medications (Cohen et al., 2024). Moreover, the use of pemafibrate is currently confined to a few countries, including Japan, Singapore, and Thailand, resulting in a paucity of data on adverse events.
Spontaneous reporting systems (SRSs) are increasingly being used in drug safety evaluation (Alomar et al., 2020). Understanding drug safety warrants multiple data sources in addition to clinical trials (Singh and Loke, 2012). SRS databases provide complementary information, especially for drugs with limited use, such as pemafibrate (Noguchi et al., 2021). The Japanese Adverse Drug–Event Report (JADER) and the Food and Drug Administration Adverse Event Reporting System (FAERS) are two of the prominent SRS databases available.
In this hypothesis-generating study, we examined the association between fibrates and biliary tract ADEs using JADER and FAERS. The study aimed to detect potential safety signals and describe disproportionality and reporting patterns to inform future pharmacoepidemiologic research.
2 Materials and methods
2.1 Database sources
Individual case safety reports (ICSRs) were obtained from the JADER database, maintained by the Pharmaceuticals and Medical Devices Agency (PMDA). Reports were also obtained from the FAERS database, maintained by the U.S. Food and Drug Administration (FDA). Data were downloaded from the official PMDA and FDA websites. The data snapshots were as follows: JADER (downloaded 6 June 2025) and FAERS (quarterly files through 2024 Q4; compiled dataset last updated on 16 June 2025). The JADER dataset covered April 2004 to May 2025. The FAERS dataset covered Q1 2014 to Q4 2024.
In the JADER dataset, the DRUG and HIST tables were left-merged with the DEMO table to create a patient-level dataset (Figure 1). In the FAERS dataset, duplicate reports were removed by keeping the record with the highest case version number in the DEMO table. The DRUG and DEMO tables were then left-merged to create a patient-level dataset. The OUTC table was merged for disproportionality analyses, and the THER table was merged for time-to-onset (TTO) analysis.
Figure 1. Flowchart of Data Analysis of JADER and FAERS Data. This flowchart shows the series of steps involved in data preprocessing, case selection, and signal detection in the JADER and FAERS datasets. JADER, Japanese Adverse Drug–Event Report database; FAERS, Food and Drug Administration Adverse Event Reporting System; Q1, first quarter; Q4, fourth quarter; ICSRs, individual case safety reports; ROR, reporting odds ratio; PRR, proportional reporting ratio; BCPNN, Bayesian confidence propagation neural network; GPS, Gamma–Poisson Shrinker.
2.2 Identification of individual case safety reports involving fibrates and biliary adverse drug events
To identify fibrate-related reports in the JADER dataset, we used the Japanese generic names for pemafibrate, fenofibrate, and bezafibrate. In the FAERS dataset, we searched for “PEMAFIBRATE,” “FENOFIBRATE,” “FENOFIBRIC ACID,” “CHOLINE FENOFIBRATE,” and “BEZAFIBRATE,” standardizing the spelling variations of “Fenofibrate.” We included all drug–event pairs in which a fibrate was listed in any drug role (e.g., suspect, concomitant, or interacting) to avoid reporting bias. We also conducted a sensitivity analysis in which the disproportionality analysis was limited to primary suspect drugs. We defined a drug–event pair as a unique combination of one drug and one adverse event. When a single ICSR contained multiple drugs or events, all possible combinations of these were counted as separate pairs. Because a single ICSR may include multiple fibrates (e.g., concomitant use or drug switching), agent-level counts are not mutually exclusive. The overall total for “all fibrates” reflects unique ICSRs. Consequently, the sum of agent-level counts may not equal the overall total.
Biliary events were identified using the Japanese translation of the Medical Dictionary for Regulatory Activities, version 28.0. Fourteen preferred terms under the high-level term “Cholecystitis and cholelithiasis” (10008616) were included (Supplementary Table 1).
2.3 Primary disproportionality analysis
For signal detection, we constructed a 2 × 2 contingency table (Table 1).
n11 represented drug–event pairs involving fibrates and cholecystitis or cholelithiasis; n12 represented drug–event pairs involving fibrates without these events; n21 represented drug–event pairs involving these events without fibrates; and n22 represented drug–event pairs involving neither. We calculated the reporting odds ratio (ROR) and proportional reporting ratio (PRR). We also calculated the information component (IC) using the Bayesian confidence propagation neural network and the empirical Bayes geometric mean (EBGM) using the Gamma–Poisson Shrinker estimator.
ROR, a sensitive screening metric, is a standard metric in JADER (Sakaeda et al., 2013). A signal was considered present when n11 ≥ 3 and ROR025, the lower bound of the 95% confidence interval (95% CI), exceeded 1. P values were obtained using Fisher’s exact test.
PRR compares the event proportion for a drug against all other drugs, and it follows the implementation of the Medicines and Healthcare products Regulatory Agency (Evans et al., 2001). PRR025, the lower bound of the 95% CI, was used to more strictly evaluate drugs that had passed ROR-based initial screening. While this higher threshold can reduce false positives, it may also increase the risk of missing important signals (Harpaz et al., 2013). A signal was considered present when n11 ≥ 3, PRR025 > 2, and the chi-square (χ2) statistic >4.
The Bayesian confidence propagation neural network is a Bayesian approach that stabilizes estimates for sparse data (Bate et al., 1998; Orre et al., 2000). A signal was considered present when IC025, the lower bound of the 95% credibility interval of IC, exceeded 0.
The Gamma–Poisson Shrinker estimator uses empirical Bayes shrinkage with stratification (Dumouchel, 1999; Szarfman et al., 2002; 2004). In the JADER dataset, EBGM was estimated using a stratified model. Reports were stratified by sex (male/female) and age group (≥60 vs. 20–50 years). Expected counts within each stratum were computed under the independence assumption and pooled across strata to obtain the EBGM and its 90% CI. A signal was considered present when EBGM05, the lower bound of the 90% CI, was equal to or greater than 2.0. EBGM was not computed for FAERS data because stratification was not performed.
The formulas used, confidence intervals computed, and parameter settings applied are provided in Supplementary Methods 1.
2.4 Stratified disproportionality analysis
Stratified analysis was performed for sex, age, and body mass index (BMI). Sex was categorized as male or female, age as ≥60 years or 20–50 years, and BMI as ≥25 or <25. For calculating BMI, the median value for each height and weight category was used, given that JADER records these in 10-cm and 10-kg increments. Reports with missing data for the target stratum were excluded.
Stratified analysis was not performed on FAERS data. Pemafibrate use is concentrated in Japan and a few other countries; therefore, only a few reports were available on the FAERS database (Arai et al., 2024), precluding BMI calculation.
2.5 Time-to-onset analysis
TTO analysis was limited to pemafibrate data from the JADER dataset with complete therapy-start and event onset dates (N = 17); reports with incomplete or ambiguous dates were excluded. TTO was defined as the number of days from drug initiation to event onset, with 1 day added to avoid zero-day values when the event occurred on the start date (Ando et al., 2019). The descriptive statistics for TTO analysis included median, first quartile, third quartile, maximum, and minimum. A box-and-whisker plot was generated.
For Weibull analysis, the shape (β) and scale (α) parameters were estimated using maximum likelihood estimation, and the Weibull curve was plotted. Because only 17 reports contained complete date information, 95% CIs for α and β were calculated through bootstrapping (Estadística et al., 2018). β was interpreted as wear-out if the lower bound >1, random if the interval included 1, and early failure if the upper bound <1 (Leroy et al., 2014).
2.6 Analytical tools and Software environment
Analyses were performed using the MSIP platform (version 1.10.1; NTT DATA Mathematical Systems Inc., Tokyo, Japan) and the Python programming language (version 3.13). ChatGPT (OpenAI, GPT-5, https://chat.openai.com/) was used to support the generation of some Python prompts for figure preparation; all outputs were reviewed and verified by the authors. This study has been reported in accordance with the Reporting of a Disproportionality Analysis for Drug Safety Signal Detection Using ICSRs in PharmacoVigilance guidelines (Fusaroli et al., 2024).
The requirement for an institutional ethics review was waived because the study used publicly available, de-identified data (see Ethics Statement).
2.7 Ethics statement
This study analyzed publicly available, de-identified reports from the JADER and FAERS databases; therefore, approval from the institutional review board was not required. For the clinical vignette, all potentially identifiable information was removed, and patient consent for publication was obtained.
3 Results
3.1 Basic characteristics of the individual case safety reports
In the JADER dataset, the proportion of male ICSRs was 67.9% for pemafibrate, 70.0% for fenofibrate, and 69.2% for bezafibrate (Table 2). ICSRs from individuals aged ≥60 years accounted for 67.9% of the pemafibrate reports, 80.0% of the fenofibrate reports, and 61.5% of the bezafibrate reports. Among the fenofibrate ICSRs, only one was submitted by a consumer; all other reports, including those for pemafibrate and bezafibrate, came from healthcare professionals.
3.2 Primary disproportionality analysis
A total of 58 unique ICSRs were identified from the JADER dataset. Pemafibrate was involved in 28 drug–event pairs, fenofibrate in 20 pairs, and bezafibrate in 13 pairs (Figure 2). For all fibrates combined, the ROR was 3.74 (95% CI, 2.88–4.85; P < 0.01), PRR was 3.71 (95% CI, 2.86–4.81; χ2 > 4), IC was 1.80 (95% CI, 1.42–2.19), and EBGM was 3.35 (90% CI, 2.92–3.83), with all metrics indicating statistically significant associations. By agent, pemafibrate and fenofibrate showed significant signals across all metrics, whereas no significant signals were observed for bezafibrate.
Figure 2. Results of Primary Disproportionality Analysis of JADER and FAERS Data. This figure presents the results of the primary disproportionality analysis conducted on the JADER and FAERS datasets. A check mark indicates a statistically significant signal. N (per-drug) = drug–event pairs. “Overall” = unique ICSRs. Per-drug counts are not mutually exclusive; therefore the total may not equal the sum across drugs. IC, information component; EBGM, empirical Bayes geometric mean; PRR025, lower bound of the 95% confidence interval for PRR; IC025, lower bound of the 95% confidence interval for IC; EBGM05, lower bound of the 90% confidence interval for EBGM.
A total of 260 unique ICSRs were identified from the FAERS dataset. Pemafibrate was involved in 3 drug–event pairs, fenofibrate in 233 pairs, and bezafibrate in 25 pairs. For all fibrates, the ROR was 3.81 (95% CI, 3.37–4.31; P < 0.01), PRR was 3.79 (95% CI, 3.36–4.28; χ2 > 4), and IC was 1.91 (95% CI, 1.79–2.04), with all metrics showing statistical significance. Signals for ROR and PRR were observed for pemafibrate, while fenofibrate and bezafibrate showed significant signals for ROR, PRR, and IC.
In a sensitivity analysis restricted to primary suspect drugs using the JADER dataset, statistically significant disproportionality was observed for all fibrates combined (N = 36; ROR 10.44 [95% CI, 7.48–14.58], PRR 10.19 [95% CI, 7.37–14.10], IC 3.01 [95% CI, 2.53–3.50]). By agent, the signal was retained for pemafibrate and fenofibrate but not for bezafibrate. In FAERS, all fibrates combined also showed statistically significant disproportionality (N = 67; ROR 6.28 [95% CI, 4.94–8.00], PRR 6.22 [95% CI, 4.90–7.89], IC 2.53 [95% CI, 2.18–2.88]). By agent, the signal was retained for fenofibrate and not retained for bezafibrate; pemafibrate had no primary suspect cases (N = 0), so signal estimation was not applicable.
The detailed results are summarized in Supplementary Tables 2, 3.
3.3 Stratified disproportionality analysis
For pemafibrate, significant ROR, PRR, and IC signals were detected in all strata (Figure 3). For fenofibrate, significant ROR and IC signals were found in the male, female, and age ≥60 years strata, whereas PRR was significant only in the male and age ≥60 years strata. No significant signals were detected for fenofibrate in BMI-based subgroups. For bezafibrate, a significant ROR signal was observed only in the BMI ≥25 stratum. No other significant signals were detected. The detailed stratified results are provided in Supplementary Table 4.
Figure 3. Results of Stratified Disproportionality Analysis of JADER Data. This figure presents the results of stratified disproportionality analysis for each fibrate in the JADER database. Drug–event pairs were extracted for each subgroup—sex (male and female), age (≥60 years and 20–50 years), and BMI (≥25 and <25)—and disproportionality analysis was performed separately for each. A check mark indicates a statistically significant signal.
3.4 Time-to-onset analysis
In the JADER dataset, TTO data were available only for 60.7% of the pemafibrate ICSRs (N = 17). The events in question comprised nine cases of cholelithiasis, four of cholecystitis, and four of acute cholecystitis (Table 3).
For all cases: α = 469.66 (95% CI, 327.34–613.50), β = 1.59 (95% CI, 1.17–2.56) (Figure 4). The median TTO was 450.0 days (95% CI, 185.0–587.0), with an interquartile range of 185.0–587.0 days.
Figure 4. Weibull Distribution and Box Plot Based on Time-to-Onset Analysis of Cholecystitis and Cholelithiasis. Time-to-onset analysis for pemafibrate in the JADER dataset (N = 17); complete date reports only. Median Interquartile Range are shown; shaded band = 95% CI for the Weibull shape parameter (β). (A) Histogram, Weibull distribution curve, and box plot based on time-to-onset (TTO) data. The histogram was created using the number of ICSRs, and the Weibull distribution curve was overlaid. (B) Failure rate distribution. The Weibull shape parameter (β) exceeded 1, indicating an increasing failure rate over time—a wear-out failure type.
For cholelithiasis: α = 485.93 (95% CI, 322.94–630.29), β = 2.05 (95% CI, 1.61–4.76). The median TTO was 525.0 days (95% CI, 183.0–706.0).
For cholecystitis and acute cholecystitis: α = 447.52 (95% CI, 223.36–705.30), β = 1.29 (95% CI, 0.87–2.94). The median TTO was 345.5 days (95% CI, 149.0–706.0).
4 Discussion
4.1 Basic characteristics of the individual case safety reports
This study analyzed preferred terms for cholecystitis and cholelithiasis.
Cholelithiasis is commonly associated with the “5 Fs”—Fair, Fat, Female, Fertile, and Forty—reflecting the higher prevalence encountered in middle-aged women (Bass et al., 2013). Because cholecystitis often arises from gallstones, the two conditions likely share risk factors, although the degree of overlap remains uncertain.
In the JADER dataset, male ICSRs exceeded female ICSRs, contrasting with the known epidemiology of gallstone disease, whereas the skew toward older ages was consistent (Bass et al., 2013). Possible explanations include prescribing patterns—triglyceride-lowering drugs are more often prescribed to men and middle-aged or older adults in Japan (Ministry of Health, Labour and Welfare, 2025)—and reporting bias, where physicians may be more likely to suspect a drug-related cause in men. Similarly, in National Database open data, fibrate prescriptions are concentrated in these age groups and are more commonly prescribed to men (Ministry of Health, Labour and Welfare, 2025). Note that the number of cases represents the number of prescriptions, not the number of patients.
Differences in comorbidity profiles may also contribute to this trend. Metabolic syndrome and type 2 diabetes, both established risk factors for gallstones (Méndez-Sánchez et al., 2005; Aune and Vatten, 2016), are more prevalent in Japanese men (Ministry of Health, Labour and Welfare, 2025). Given that comorbidity data in JADER are often incomplete, population-based cohort studies including both drug-exposed and unexposed individuals are needed to distinguish drug effects from metabolic risk.
4.2 Disproportionality analyses
Primary disproportionality analysis conducted on the JADER dataset detected clear biliary tract disease signals for fibrates. Pemafibrate showed significant disproportionality across ROR, PRR, IC, and EBGM, with stratified analysis confirming consistent signals in all subgroups. These findings suggest an association between fibrates and biliary ADEs.
In the JADER dataset, consistent signals were observed for pemafibrate, while fewer signals were detected for fenofibrate and bezafibrate, respectively. The presence or absence of such signals may reflect not only pharmacological characteristics, such as PPARα selectivity, but also differences in patient characteristics, including demographic, genetic, and metabolic factors.
Pemafibrate has a markedly higher selectivity for PPARα than other fibrates while retaining strong triglyceride-lowering effects (Honda et al., 2022). PPARα agonism can lower bile acid output by reducing CYP7A1 activity and CYP27A1 mRNA levels (Post et al., 2001; Ghonem et al., 2015). Mechanistically, PPARα agonists diminish hepatocyte nuclear factor-4α binding to the direct repeat 1 element on the CYP7A1 promoter, and PPARα may antagonize liver X receptor-dependent activation of CYP7A1 (Marrapodi and Chiang, 2000; Rakhshandehroo et al., 2010). Beyond effects on total output, bile acid composition is partly governed by sterol 12-alpha-hydroxylase (CYP8B1). PPARα activation increases hepatic CYP8B1, thereby raising 12α-hydroxylated bile acids and the cholic acid/chenodeoxycholic acid ratio (Chiang, 2004; Xie et al., 2019). Because cholic acid-rich bile is generally more cholesterol-saturated than chenodeoxycholic acid-rich bile, this shift may increase the cholesterol saturation index and the risk of cholesterol gallstones (Einarsson and Grundy, 1980). Given its high selectivity for PPARα, pemafibrate may amplify these pathways and alter bile acid homeostasis, potentially increasing gallstone risk.
Further research is needed to determine whether this represents a class effect, a drug-specific phenomenon, or an interaction with patient risk factors. Mechanistic in vivo and in vitro studies could clarify how pemafibrate alters bile acid synthesis and cholesterol saturation. Large population-based cohorts are also necessary to quantify risk and adjust for confounding factors. Integrating pharmacovigilance data with observational and mechanistic studies will be essential for evidence-based prescribing and monitoring.
In the United States (U.S.), adult obesity (BMI ≥30: 41.9%) exceeds that in Japan (BMI ≥25: 25.3%; ≥30: 4.5%) (Stierman et al., 2021; Ministry of Health, Labour and Welfare, 2025), indicating a higher baseline risk of gallstones in the U.S. Even so, a signal was detected in Japan’s JADER database, suggesting drug-related contributions to reported gallstone disease and cholecystitis. Cross-country differences in prescribing likely influenced signal detection. In Japan, fenofibrate and bezafibrate have long been used, and pemafibrate use has increased since its approval. In the U.S., fenofibrate predominates, whereas bezafibrate and pemafibrate are not approved (Jackevicius et al., 2011; Arai et al., 2024). FAERS reporting is U.S.-centric, and the case counts (N) in the primary analysis likely reflect this exposure distribution.
4.3 Time-to-onset analysis
TTO analysis helps identify temporal patterns in the development of ADEs (Leroy et al., 2014). Because gallstones may remain asymptomatic for over 2 years (Mok et al., 1986), TTO in SRSs often reflects diagnosis or symptom onset rather than true onset (Leroy et al., 2014).
In this study, Weibull analysis suggested an increasing risk of biliary ADEs with prolonged pemafibrate use. The median TTO was 450 days (95% CI, 185.0–587.0), which is shorter than that reported in previous studies (Mok et al., 1986), possibly owing to fibrate pharmacology and early-reporting bias in SRSs (Goldman, 1998).
Seven cholecystitis cases were identified (four acute, three unspecified). The acute cases showed a wide TTO range (31–706 days), with the upper bound unusually high for an acute presentation. Most acute cholecystitis cases result from cystic duct obstruction by gallstones (Gallaher and Charles, 2022), suggesting that gallstone formation may have preceded inflammation. However, the limited clinical data in SRSs precludes causal inferences. Given that pemafibrate is contraindicated in patients with cholelithiasis (Kowa Co.ltd., 2024) and often discontinued after biliary ADEs, regular hepatobiliary monitoring, including gallstone assessment, is recommended. Based on the median TTO of about 450 days in this study, starting hepatobiliary monitoring around 6 months after treatment begins and continuing it at least once a year seems reasonable. Monitoring should include checking for biliary symptoms, liver function tests, and abdominal ultrasonography when needed. These findings should be interpreted with caution because the Weibull analysis was based on a small number of cases. More work is needed to better define the optimal timing, frequency, and approach to monitoring.
While caution is warranted regarding the potential biliary risks associated with fibrate-class drugs, these agents have demonstrated cardiovascular benefits in patients with dyslipidemia (Jun et al., 2010). Therefore, clinicians should carefully weigh the cardiovascular benefits against the biliary risks and tailor treatment and monitoring strategies to individual patients.
4.4 Case in clinical practice
We report a real-world case of gallstone detection after long-term pemafibrate use in an elderly Japanese woman (Figure 5). She switched from ezetimibe to pemafibrate at an initial daily dosage of 0.1 mg, which was subsequently increased to 0.2 mg daily. The treatment was stopped after 3 years and 10 months after her lipid levels improved. The treatment was resumed 8 months later using the extended-release tablet.
Figure 5. Treatment Timeline and Trends in Serum Lipid Levels. Vertical dashed lines indicate major clinical events during the treatment course, and the lines represent LDL-C (orange), HDL-C (blue), and TG (green) levels at each measurement point. The x-axis shows the date, and the y-axis shows serum lipid levels (mg/dL). QD: quaque die (once daily), BID: bis in die (twice daily), ER: extended-release, LDL-C: Low-Density Lipoprotein Cholesterol, HDL-C: High-Density Lipoprotein Cholesterol, TG: Triglycerides.
One year after resuming treatment, a routine ultrasound revealed a single small gallstone. She had no history of cholelithiasis and was asymptomatic. The only risk factors identified were female sex and age >40 years. The total duration of pemafibrate treatment was approximately 1,760 days.
Although causality is unproven, a pemafibrate-associated ADE cannot be excluded as a possible etiology of the patient’s condition. Our SRS analysis found consistent, significant biliary ADE signals across sex, age, and BMI strata. This case is clinically consistent with those findings and highlights the need to reassess biliary ADE risk with long-term fibrate use. In elderly patients, gallstones often remain asymptomatic; therefore, regular imaging-based monitoring should be considered regardless of symptoms.
4.5 Limitations
Although SRSs are useful for early signal detection and post-marketing surveillance (Montastruc et al., 2006), they have some limitations (Kasliwal, 2012; Noguchi et al., 2021). Underreporting is substantial, with a median rate of nearly 94% (Hazell and Shakir, 2006). Reporting bias is common, with peaks observed soon after drug approval (Weber effect) (Weber, 1987; Raschi et al., 2013) and increases in reporting following label warnings or publications (notoriety bias) (Pariente et al., 2007). Pemafibrate was launched in Japan in 2018, and its safety data may have been influenced by the Weber effect. However, continuous reporting of cholecystitis and cholelithiasis was observed without early clustering, suggesting only a limited impact of the Weber effect. Nevertheless, its potential influence cannot be completely excluded due to the inherent characteristics of SRS data. Severe or novel events also tend to be selectively reported (Hazell and Shakir, 2006; Matsuda et al., 2015). Data on key patient characteristics are often missing (Dang et al., 2022), which limits adjustment for confounding factors. Furthermore, known gallstone risk factors (obesity, female sex, and diabetes) were more frequent among patients treated with fibrates, and this imbalance may have contributed to the observed signals. Incidence rates cannot be calculated because only patients with ADEs are included (Goldman, 1998).
These sources of bias and confounding factors cannot be adequately controlled in SRS analyses. Therefore, findings should be interpreted as indicators of disproportional reporting rather than evidence of causality. For some drug–event combinations in this study, the number of cases was small, resulting in limited statistical power and wide uncertainty in the estimates. The time-to-onset assessment relied on only 17 cases with complete date information and did not account for the effects of treatment discontinuation or dose adjustments. Consequently, these results should be regarded as hypothesis-generating and require confirmation in larger, well-designed studies.
5 Conclusion
This study suggests an association between fibrates and biliary ADEs, particularly cholecystitis and cholelithiasis.
These findings provide valuable insights to guide future mechanistic and epidemiological studies. In clinical practice, careful attention should be paid to biliary ADEs during fibrate therapy. Regular hepatobiliary monitoring should be tailored to the patient’s background and maintained throughout treatment.
Data availability statement
Publicly available datasets were analyzed in this study. This data can be found here: JADER data are available from the PMDA website (https://www.pmda.go.jp/safety/info-services/drugs/adr-info/suspected-adr/0003.html) FAERS data are available from the FDA website (https://fis.fda.gov/extensions/FPD-QDE-FAERS/FPD-QDE-FAERS.html).
Ethics statement
Ethical approval was not required for the study involving humans in accordance with the local legislation and institutional requirements. Written informed consent to participate in this study was not required from the participants or the participants’ legal guardians/next of kin in accordance with the national legislation and the institutional requirements.
Author contributions
SW: Conceptualization, Data curation, Formal Analysis, Methodology, Project administration, Software, Visualization, Writing – original draft, Writing – review and editing, Investigation. KN: Writing – review and editing, Data curation, Methodology, Software, Validation. NO: Writing – review and editing. TW: Writing – review and editing. HS: Conceptualization, Funding acquisition, Methodology, Resources, Supervision, Validation, Writing – review and editing.
Funding
The authors declare that financial support was received for the research and/or publication of this article. Sanyo-Onoda City University supported the article processing charge. The funder had no role in the study design; data collection, analysis, or interpretation; decision to publish; or preparation of the manuscript.
Acknowledgements
We thank our laboratory members for valuable discussions. We are deeply grateful to Mariko Ogawa, Rina Kawabata, and Michiko Akitomi at Kenko Planning Ltd. Mede Pharmacy for their generous guidance and support during the pharmacy practice training. Their contributions provided us with the opportunity to be involved in the clinical case described in this study. The authors would like to thank Enago (www.enago.jp) for the English language review.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Generative AI statement
The authors declare that Generative AI was used in the creation of this manuscript. The authors acknowledge the use of ChatGPT (OpenAI, GPT-5, https://chat.openai.com/) to support English grammar correction and to generate Python prompts for figure preparation. All outputs were carefully reviewed by the authors, who are trained in Python, to ensure their appropriateness and accuracy. In addition, the English text was subsequently reviewed by a native speaker for final adjustments.
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Supplementary material
The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fphar.2025.1700589/full#supplementary-material
References
Alomar, M., Tawfiq, A. M., Hassan, N., and Palaian, S. (2020). Post marketing surveillance of suspected adverse drug reactions through spontaneous reporting: current status, challenges and the future. Ther. Adv. Drug Saf. 11, 2042098620938595. doi:10.1177/2042098620938595
Ando, G., Taguchi, K., Enoki, Y., Yokoyama, Y., Kizu, J., and Matsumoto, K. (2019). Evaluation of the expression time of ganciclovir-induced adverse events using JADER and FAERS. Biol. Pharm. Bull. 42, 1799–1804. doi:10.1248/bpb.b19-00156
Arai, H., Yamashita, S., Araki, E., Yokote, K., Tanigawa, R., Saito, A., et al. (2024). Efficacy and safety of pemafibrate extended-release tablet: a phase 3, multicenter, randomized, double-blind, active-controlled, parallel-group comparison trial. J. Atheroscler. Thromb. 31, 1517–1538. doi:10.5551/jat.64677
Aune, D., and Vatten, L. J. (2016). Diabetes mellitus and the risk of gallbladder disease: a systematic review and meta-analysis of prospective studies. J. Diabetes Complicat. 30, 368–373. doi:10.1016/j.jdiacomp.2015.11.012
Bass, G., Gilani, S. N. S., Walsh, T. N., and Leader, F. (2013). Validating the 5Fs mnemonic for cholelithiasis: time to include family history. Postgrad. Med. J. 89, 638–641. doi:10.1136/postgradmedj-2012-131341
Bate, A., Lindquist, M., Edwards, I. R., Olsson, S., Orre, R., Lansner, A., et al. (1998). A Bayesian neural network method for adverse drug reaction signal generation. Eur. J. Clin. Pharmacol. 54, 315–321. doi:10.1007/s002280050466
Caroli-Bosc, F.-X., Le Gall, P., Pugliese, P., Delabre, B., Caroli-Bosc, C., Demarquay, J.-F., et al. (2001). Role of fibrates and HMG-CoA reductase inhibitors in gallstone formation: epidemiological study in an unselected population. Dig. Dis. Sci. 46, 540–544. doi:10.1023/a:1005643014395
Chiang, J. Y. L. (2004). Regulation of bile acid synthesis: pathways, nuclear receptors, and mechanisms. J. Hepatol. 40, 539–551. doi:10.1016/j.jhep.2003.11.006
Cohen, E. B., Patwardhan, M., Raheja, R., Alpers, D. H., Andrade, R. J., Avigan, M. I., et al. (2024). Drug-induced liver injury in the elderly: consensus statements and recommendations from the IQ-DILI initiative. Drug Saf. 47, 301–319. doi:10.1007/s40264-023-01390-5
Dang, V., Wu, E., Kortepeter, C. M., Phan, M., Zhang, R., Ma, Y., et al. (2022). Evaluation of a natural language processing tool for extracting gender, weight, ethnicity, and race in the US food and drug administration adverse event reporting system. Front. Drug Saf. Regul. 2, 1020943. doi:10.3389/fdsfr.2022.1020943
Dumouchel, W. (1999). Bayesian data mining in large frequency tables, with an application to the FDA spontaneous reporting system. Am. Stat. 53, 177–190. doi:10.1080/00031305.1999.10474456
Einarsson, K., and Grundy, S. M. (1980). Effects of feeding cholic acid and chenodeoxycholic acid on cholesterol absorption and hepatic secretion of biliary lipids in man. J. Lipid Res. 21, 23–34. doi:10.1016/s0022-2275(20)39836-9
Estadística, C., En, C., Ojeda, L., and Ojeda, C. (2018). Comparison of confidence intervals obtained by normal approximation and bootstrap for the weibull distribution’s parameters. Bogotá D. C. Comunicaciones Estadística. doi:10.15332/s2027-3355.2018.0001.03
Evans, S. J. W., Waller, P. C., and Davis, S. (2001). Use of proportional reporting ratios (PRRs) for signal generation from spontaneous adverse drug reaction reports. Pharmacoepidemiol. Drug Saf. 10, 483–486. doi:10.1002/pds.677
Fusaroli, M., Salvo, F., Begaud, B., AlShammari, T. M., Bate, A., Battini, V., et al. (2024). The reporting of a disproportionality analysis for drUg safety signal detection using individual case safety reports in PharmacoVigilance (READUS-PV): development and statement. Drug Saf. 47, 575–584. doi:10.1007/s40264-024-01421-9
Gallaher, J. R., and Charles, A. (2022). Acute cholecystitis: a review. JAMA 327, 965–975. doi:10.1001/jama.2022.2350
Ghonem, N. S., Assis, D. N., and Boyer, J. L. (2015). Fibrates and cholestasis. Hepatology 62, 635–643. doi:10.1002/hep.27744
Goldman, S. A. (1998). Limitations and strengths of spontaneous reports data. Clin. Ther. 20, C40–C44. doi:10.1016/s0149-2918(98)80007-6
Harpaz, R., DuMouchel, W., LePendu, P., Bauer-Mehren, A., Ryan, P., and Shah, N. H. (2013). Performance of pharmacovigilance signal-detection algorithms for the FDA adverse event reporting system. Clin. Pharmacol. Ther. 93, 539–546. doi:10.1038/clpt.2013.24
Hazell, L., and Shakir, S. A. W. (2006). Under-reporting of adverse drug reactions: a systematic review. Drug Saf. 29, 385–396. doi:10.2165/00002018-200629050-00003
Honda, A., Kamata, S., Akahane, M., Machida, Y., Uchii, K., Shiiyama, Y., et al. (2022). Functional and structural insights into human PPARα/δ/γ subtype selectivity of bezafibrate, fenofibric acid, and pemafibrate. Int. J. Mol. Sci. 23, 4726. doi:10.3390/ijms23094726
Jackevicius, C. A., Tu, J. V., Ross, J. S., Ko, D. T., Carreon, D., and Krumholz, H. M. (2011). Use of fibrates in the United States and Canada. JAMA 305, 1217–1224. doi:10.1001/jama.2011.353
Jun, M., Foote, C., Lv, J., Neal, B., Patel, A., Nicholls, S. J., et al. (2010). Effects of fibrates on cardiovascular outcomes: a systematic review and meta-analysis. Lancet 375, 1875–1884. doi:10.1016/S0140-6736(10)60656-3
Kasliwal, R. (2012). Spontaneous reporting in pharmacovigilance: strengths, weaknesses and recent methods of analysis. Available online at: http://www.jcpcarchives.org/full/spontaneous-reportingin-pharmacovigilance--strengths-49.php (Accessed August 30, 2025).
Kowa, Co., Ltd (2024). Package insert of parmodia® tablets 0.1 mg (pemafibrate). Japan: Kowa Co., Ltd.
Leroy, F., Dauxois, J.-Y., Théophile, H., Haramburu, F., and Tubert-Bitter, P. (2014). Estimating time-to-onset of adverse drug reactions from spontaneous reporting databases. BMC Med. Res. Methodol. 14, 17. doi:10.1186/1471-2288-14-17
Marrapodi, M., and Chiang, J. Y. L. (2000). Peroxisome proliferator-activated receptor α (PPARα) and agonist inhibit cholesterol 7α-hydroxylase gene (CYP7A1) transcription. J. Lipid Res. 41, 514–520. doi:10.1016/s0022-2275(20)32398-1
Matsuda, S., Aoki, K., Kawamata, T., Kimotsuki, T., Kobayashi, T., Kuriki, H., et al. (2015). Bias in spontaneous reporting of adverse drug reactions in Japan. PLoS One 10, e0126413. doi:10.1371/journal.pone.0126413
Méndez-Sánchez, N., Chavez-Tapia, N. C., Motola-Kuba, D., Sanchez-Lara, K., Ponciano-Rodríguez, G., Baptista, H., et al. (2005). Metabolic syndrome as a risk factor for gallstone disease. World J. Gastroenterol. 11, 1653. doi:10.3748/wjg.v11.i11.1653
Ministry of Health, Labour and Welfare (2025). The 9th NDB open data: part 2 (data) – prescription drugs (oral, topical, injection), number of prescriptions by therapeutic category, sex, and age group. Tokyo: Ministry of Health, Labour and Welfare. Available online at: https://www.mhlw.go.jp/ndb/opendatasite/ (Accessed August 30, 2025).
Mok, H. Y., Druffel, E. R., and Rampone, W. M. (1986). Chronology of cholelithiasis. Dating gallstones from atmospheric radiocarbon produced by nuclear bomb explosions. N. Engl. J. Med. 314, 1075–1077. doi:10.1056/NEJM198604243141703
Montastruc, J.-L., Sommet, A., Lacroix, I., Olivier, P., Durrieu, G., Damase-Michel, C., et al. (2006). Pharmacovigilance for evaluating adverse drug reactions: value, organization, and methods. Jt. Bone Spine 73, 629–632. doi:10.1016/j.jbspin.2006.09.002
Noguchi, Y., Tachi, T., and Teramachi, H. (2021). Detection algorithms and attentive points of safety signal using spontaneous reporting systems as a clinical data source. Brief. Bioinform 22, bbab347. doi:10.1093/bib/bbab347
Orre, R., Lansner, A., Bate, A., and Lindquist, M. (2000). Bayesian neural networks with confidence estimations applied to data mining. Comput. Stat. Data Anal. 34, 473–493. doi:10.1016/s0167-9473(99)00114-0
Pariente, A., Gregoire, F., Fourrier-Reglat, A., Haramburu, F., and Moore, N. (2007). Impact of safety alerts on measures of disproportionality in spontaneous reporting databases: the notoriety bias. Drug Saf. 30, 891–898. doi:10.2165/00002018-200730100-00007
Post, S. M., Duez, H., Gervois, P. P., Staels, B., Kuipers, F., and Princen, H. M. G. (2001). Fibrates suppress bile acid synthesis via peroxisome proliferator-activated receptor-alpha-mediated downregulation of cholesterol 7alpha-hydroxylase and sterol 27-hydroxylase expression. Arterioscler. Thromb. Vasc. Biol. 21, 1840–1845. doi:10.1161/hq1101.098228
Rakhshandehroo, M., Knoch, B., Müller, M., and Kersten, S. (2010). Peroxisome proliferator-activated receptor alpha target genes. PPAR Res. 2010, 612089–20. doi:10.1155/2010/612089
Raschi, E., Piccinni, C., Poluzzi, E., Marchesini, G., and De Ponti, F. (2013). The association of pancreatitis with antidiabetic drug use: gaining insight through the FDA pharmacovigilance database. Acta Diabetol. 50, 569–577. doi:10.1007/s00592-011-0340-7
Sakaeda, T., Tamon, A., Kadoyama, K., and Okuno, Y. (2013). Data mining of the public version of the FDA adverse event reporting system. Int. J. Med. Sci. 10, 796–803. doi:10.7150/ijms.6048
Singh, S., and Loke, Y. K. (2012). Drug safety assessment in clinical trials: methodological challenges and opportunities. Trials 13, 138. doi:10.1186/1745-6215-13-138
Staels, B., Dallongeville, J., Auwerx, J., Schoonjans, K., Leitersdorf, E., and Fruchart, J.-C. (1998). Mechanism of action of fibrates on lipid and lipoprotein metabolism. Circulation 98, 2088–2093. doi:10.1161/01.cir.98.19.2088
Stierman, B., Afful, J., Carroll, M. D., Chen, T.-C., Davy, O., Fink, S., et al. (2021). National health and nutrition examination survey 2017–March 2020 prepandemic data files: development of files and prevalence estimates for selected health outcomes. Natl. Health stat. Rep. doi:10.15620/cdc:106273
Szarfman, A., Machado, S. G., and O’Neill, R. T. (2002). Use of screening algorithms and computer systems to efficiently signal higher-than-expected combinations of drugs and events in the US FDA’s spontaneous reports database. Drug Saf. 25, 381–392. doi:10.2165/00002018-200225060-00001
Szarfman, A., Tonning, J. M., and Doraiswamy, P. M. (2004). Pharmacovigilance in the 21st century: new systematic tools for an old problem. Pharmacotherapy 24, 1099–1104. doi:10.1592/phco.24.13.1099.38090
Weber, J. C. P. (1987). Epidemiology in the United Kingdom of adverse drug reactions from non-steroidal anti-inflammatory drugs. Side-Eff. Anti-Inflamm. Drugs, 27–35. doi:10.1007/978-94-010-9772-7_2
Keywords: fibrates, pemafibrate, biliary adverse events, pharmacovigilance, disproportionality analysis, time-to-onset analysis, JADER, FAERS
Citation: Watanabe S, Nagura K, Okada N, Watanabe T and Sagara H (2025) Disproportionality analysis of biliary adverse events associated with fibrates using the JADER and FAERS databases. Front. Pharmacol. 16:1700589. doi: 10.3389/fphar.2025.1700589
Received: 07 September 2025; Accepted: 14 November 2025;
Published: 24 November 2025.
Edited by:
Yuwei Liu, The First Hospital of Jilin University, ChinaReviewed by:
Yuchen Han, First Affiliated Hospital of Jinan University, ChinaYanlang He, Nanchang University, China
Copyright © 2025 Watanabe, Nagura, Okada, Watanabe and Sagara. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Hidenori Sagara, aHNhZ2FyYUBycy5zb2N1LmFjLmpw