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ORIGINAL RESEARCH article

Front. Cell. Infect. Microbiol.

Sec. Extra-intestinal Microbiome

Volume 15 - 2025 | doi: 10.3389/fcimb.2025.1619059

Metagenomic Analysis of Blood Microbiota Alterations: In-sights into HIV Progression and Immune Restoration

Provisionally accepted
Yingjie  ChenYingjie ChenRongqiu  ZhangRongqiu ZhangJuan  WenJuan WenJingyue  ZhaoJingyue ZhaoJianmei  ZhangJianmei Zhang*
  • Xiamen Center for Disease Control and Prevention, Xiamen, China

The final, formatted version of the article will be published soon.

Emerging evidence suggests that the blood microbiome may influence the progression of HIV infection and immune restoration. This study aims to comprehensively characterize blood microbiota alterations associated with HIV infection and antiretroviral therapy (ART) and evaluates their potential as microbial indicators for assessing infection status and immune restoration. We recruited 91 participants, including 31 treatment-naïve HIV-infected individuals, 30 ART-treated individuals with undetectable viral loads, and 30 healthy controls. Blood samples were collected for metagenomic sequencing and immunological profiling. HIV infection profoundly disrupted blood microbiota diversity and composition, with a marked reduction in α-diversity and enrichment of opportunistic pathogens such as Pseudomonas aeruginosa, Acinetobacter baumannii and Stenotrophomonas maltophilia, alongside depletion of beneficial taxa like Bifidobacterium longum. ART partially restored microbial diversity but did not fully reestablish a healthy microbiota. Correlation analysis revealed that Acinetobacter pittii, Xanthomonas campestris and Diaphorobacter nitroreducens were significantly associated with viral load, suggesting their potential role in HIV progression. Additionally, after ART, Acinetobacter junii and Pseudomonas putida were significantly correlated with the CD4/CD8 ratio, indicating their potential role in immune restoration. These findings provide new insights into the interactions between blood microbiota and HIV progression and offer a basis for microbial-based diagnostic and therapeutic strategies.

Keywords: Blood microbiota, metagenomic sequencing, HIV infection, AntiretroviralTherapy, Correlation analysis

Received: 27 Apr 2025; Accepted: 03 Oct 2025.

Copyright: © 2025 Chen, Zhang, Wen, Zhao and Zhang. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Jianmei Zhang, 64369521@qq.com

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