Abstract
The evolution of the melanocortin receptors (MCRs) is closely associated with the evolution of the melanocortin-2 receptor accessory proteins (MRAPs). Recent annotation of the elephant shark genome project revealed the sequence of a putative MRAP1 ortholog. The presence of this sequence in the genome of a cartilaginous fish raises the possibility that the mrap1 and mrap2 genes in the genomes of gnathostome vertebrates were the result of the chordate 2R genome duplication event. The presence of a putative MRAP1 ortholog in a cartilaginous fish genome is perplexing. Recent studies on melanocortin-2 receptor (MC2R) in the genomes of the elephant shark and the Japanese stingray indicate that these MC2R orthologs can be functionally expressed in CHO cells without co-expression of an exogenous mrap1 cDNA. The novel ligand selectivity of these cartilaginous fish MC2R orthologs is discussed. Finally, the origin of the mc2r and mc5r genes is reevaluated. The distinctive primary sequence conservation of MC2R and MC5R is discussed in light of the physiological roles of these two MCR paralogs.
Introduction
In many respects, the features of the melanocortin receptor (MCR) gene family (i.e., mc1r, mc2r, mc3r, mc4r, mc5r) are rather straightforward. These G Protein-coupled receptors are only found in chordates (), and the proliferation of paralogous genes in this family has been influenced by the two genome duplication events that occurred during the early evolution of the chordates (–). In addition, these receptors appear to be predominately coupled to a cAMP/PKA pathway at their respective target cells (). Finally, all of the MCRs are activated by one or more of the melanocortin-related peptides (i.e., ACTH, α-MSH, β-MSH, γ-MSH, or δ-MSH), which are derived from the precursor protein, POMC in gnathostomes (), and the precursors POM or POC in lampreys ().
There are also features of this gene family that are somewhat unique. For example, some of the MCRs interact with the accessory proteins melanocortin-2 receptor accessory protein (MRAP)1 and MRAP2 (, ), and these interactions can affect receptor trafficking and activation. In addition, for teleosts and tetrapods, the MC2R paralog has exclusive ligand selectivity for ACTH as compared to the more permissive ligand selectivity of the other MCR paralogs for ACTH and the MSH-sized ligands (). Finally, while it is assumed that two genome duplications should yield four paralogous genes, there are five paralogous genes present in this family. Hence, the origin of the fifth gene and the physiological significance of the fifth gene are another issue that will be revisited.
Phylogeny and Proposed Evolution of the MRAPs
Following the initial cloning of the five MCRs, pharmacology studies for each receptor were done in heterologous non-adrenal cortex-derived mammalian cell lines with one exception – MC2R (). Mountjoy et al. () found that in order to examine the ligand selectivity of human MC2R, the receptor cDNA needed to be expressed in Cloudman S91 melanoma cells; a cell line that endogenously expresses the Mc1r gene. Subsequent studies would show that mammalian MC2R orthologs could be functionally expressed in cell lines derived from adrenal cortex cells, but not in non-adrenal mammalian cell lines (–). These observations contributed to the discovery of the accessory protein, MRAP ().
Melanocortin-2 receptor accessory protein is a single chain polypeptide with one membrane-spanning domain. This transmembrane (TM) protein forms a homodimer at the endoplasmic reticulum in which the two monomers are oriented in an anti-parallel manner [reverse topology; for reviews, see Ref. (, )]. In the human genome, there are two paralogous MRAP genes, MRAP or MRAP1 (), and MRAP2 (). For this discussion, “mrap” will be used to refer to the ancestral accessory protein gene, and mrap1 and mrap2 will be used to designate the two paralogous members of the gene family. As a reference for the discussion that will follow, Table 1 summarizes the observations from Chan et al. () with respect to the effects of human MRAP1α and human MRAP2 on the activation and trafficking of the five human MCRs.
Table 1
| MRAP1α | MRAP2 | |||
|---|---|---|---|---|
| Trafficking | Activation | Trafficking | Activation | |
| MC1R | Not required | Not required | Not required | Lowers |
| MC2R | Facilitates | Required | Facilitates | Required |
| MC3R | Not required | Lowers | Not required | Lowers |
| MC4R | Restricts | Lowers | Restricts | Lowers |
| MC5R | Restricts | Lowers | Restricts | Lowers |
Summary of the interactions between human melanocortin receptors and human MRAP1α and human MRAP2.
Chan et al. () expressed individual human melanocortin receptors in CHO cells either in the presence or absence of either human MRAP1α or human MRAP2, and measured either trafficking to the plasma membrane or activation with human ACTH (1–39) (MC2R; single dose 10−6M) or NDP-MSH (MC1R, MC3R, MC4R, MC5R: single dose 10−9M). For the trafficking experiments, “not required” indicates that co-expression with an MRAP had no negative or positive effect on trafficking to the plasma membrane relative to CHO cells transfected with only the melanocortin receptor. “Facilitates” indicates that the receptor did not translocate to the plasma membrane in the absence of the MRAP. “Restricts” indicates that there was a decline in trafficking to the plasma membrane when the receptor was co-expressed with an MRAP. For activation experiments, “not required” indicates that co-expression with an MRAP had no negative or positive effect on activation relative to CHO cells transfected with only the melanocortin receptor. “Requires” indicates that the receptor could not be activated when expressed alone in CHO cells. “Lowers” indicates that there was a statistically significant drop in activation when the receptor was co-expressed with an MRAP.
The salient features of the MRAPs are illustrated by mouse MRAP1 and MRAP2 (Figure 1). For MRAP1, the LKANKH motif is required for reverse topology (), and the corresponding reverse topology motif in mouse MRAP2 is LKAHKY, [(); Figure 1]. Reverse topology motifs are also apparent in the chicken and zebrafish MRAP1 and MRAP2 orthologs (Figure 1).
Figure 1
The TM domain of mouse Mrap1 is required for the trafficking of MC2R to the plasma membrane (
Given the preceding comments on primary sequence similarity, the most striking difference between mouse Mrap1 and Mrap2 is the activation motif present in Mrap1 that is conspicuously absent in Mrap2 (Figure 1). As a result, although MC2R will move to the plasma membrane in the presence of MRAP2, activation of the receptor following an ACTH-binding event is barely detectable at concentrations of ACTH of 10−8M or less (
Sebag and Hinkle (
While it appears that the direct interaction of mammalian MRAP2 orthologs with mammalian MC2R orthologs might be pharmacological rather physiological [Table 1; (
When considering a physiological role for MRAP2, a promising area of study has been the interaction between MRAP2 and MC4R in the modulation of feeding behavior by neurons in the hypothalamus (
A more complex mechanism for the role of MRAP2 in regulating feeding behavior has been observed for the zebrafish (
In terms of the evolution of the MRAP gene family, an earlier review concluded that MRAP2 was the ancestral “MRAP” (
From a phylogenetic/evolutionary perspective, the detection of the putative cartilaginous fish MRAP1 ortholog fills a gap. The elephant shark is in Subclass Holocephali (Class Chondrichithyes), and it is very probable that mrap1 orthologs are present in the genomes of members of Subclass Elasmobranchii (i.e., sharks and rays). Hence, mrap1 and mrap2 paralogs may have been present in the genome of the ancestral gnathostomes (Figure 2). Given these assumptions, the evolution of the mrap gene family may have involved the following scenario. In the ancestral agnathan vertebrates that underwent the 2R genome duplication event, the ancestral mrap gene would have been duplicated to yield the mrap1 and mrap2 genes, and these paralogous genes presumably would have been distributed on separate chromosomes. Currently, mrap1 and mrap2 genes have been found on separate chromosomes in the various gnathostome genome databases where chromosomes maps are available.3 Among extant 2R vertebrates (Figure 2), an mrap1 ortholog has not been detected in the current version of the lamprey genome project4 (Figure 2). Whether the absence of this ortholog represents the incomplete state of the lamprey genome project, or a secondary loss of the ortholog cannot be determined at this time. In addition, mrap1 orthologs have not been detected in the genomes of either the frog, Xenopus tropicalis or the reptile, Anolis carolinensis. However, the MC2R orthologs for both species requires co-expression with a tetrapod MRAP1 ortholog for functional expression in CHO cells (
Figure 2

Proposed evolution for the MRAP Gene Family. The evolutionary tree presented in this figure assumes that there was an ancestral mrap (MRAP) gene in the genome of ancestral agnathans. Following the 2R genome duplication event, two paralogous mrap genes emerged (MRAP1 and MRAP2) and are present in the genomes of many extant 2R chordates. A solid black box indicates that the gene has been reported in the respective taxa. A box with a dashed line border indicates a gene that is predicted, but has not been detected (i.e., lamprey MRAP1) or the organism is extinct (e.g., ancestral agnathans, ancestral in gnathostomes). A box with a dotted border indicates a taxonomic group in which MRAP1 is required for the functional expression of MC2R, but a MRAP1 sequence has not been identified in the genome of a representative from that taxonomic group.
From a pharmacological perspective, the presence of the putative elephant shark MRAP1 ortholog is perplexing. An earlier study had shown that the elephant shark MC2R ortholog could be functionally expressed in CHO cells in the absence of co-transfection of an exogenous mrap1 cDNA (
Ligand Selectivity of MC2R Orthologs
Several studies have shown that the MC2R orthologs of teleosts and tetrapods (Figure 2) require co-expression with a corresponding MRAP1 ortholog. Perhaps as a result of this interaction, and the intrinsic tertiary features of these MC2R orthologs, all of these receptors can only be activated by ACTH, and not by any MSH-sized ligand (
Studies on the ligand selectivity of dogfish, Squalus acanthias (order Squaliformes, subclass Elasmobranchii), MC3R, MC4R, and MC5R paralogs (
In any event, there should be distinct sites within the teleost/tetrapod MC2R orthologs and the cartilaginous fishes MC2R orthologs that can account for the ligand selectivity properties of these receptors. In this regard, a comparison of MC2R orthologs with an MC4R paralog my reveal these potential sites. As shown in Figure 3, the human, zebrafish, elephant shark, and stingray MC2R amino acid sequences could be aligned to the stingray MC4R sequence by inserting a minimum of two gaps. The positions of critical residues in TM2, TM3, TM6, and TM7 that correspond to the HFRW-binding site for a MC4R ortholog (
Figure 3

Amino Acid Alignment of MC2R Orthologs. The amino acid sequences of human (h) MC2R (NP_ 001278840.1), zebrafish (z) MC2R (XP_00518229.1) stingray (s) MC2R (LC108747), elephant shark (e) MC2R (FAA704.1), stingray (s) MC4R (LC108749) were aligned, and amino acid positions in which four of the five sequences were identical are marked in red. The position of critical amino acids in the HFRW-binding site of MC4R orthologs (
Previous studies used chimeric proteins of human MC2R and human MC4R to analyze the functions of these regions. For example, Fridmanis et al. (
Melanocortin Receptor Genome and Gene Duplications
The successive genome duplications during the radiation of the chordates theoretically should yield four paralogous genes in the genomes of extant cartilaginous fishes, non-teleost ray finned fishes, and tetrapods. However, in the genomes of the Japanese stingray (
Figure 4

Amino Acid alignment of Gar MC2R, MC4R, and MC5R. The amino acid sequences of gar MC2R (ENSLOCT00000011667), gar MC4R (ENSLOCT00000022303), and gar MC5R (ENSLOCG00000018340) were aligned and positions that were identical are marked in red. (A) alignment of gar MC2R and gar MC5R; (B) alignment of gar MC4R and gar MC5R.
However, Vastermark and Schioth (
While either scenario (i.e., MC2R/MC5R or MC4R/MC5R) can be supported by the current evidence, there are at least two issues that neither scenario adequately addresses. As shown in Figure 5A, a comparison of stingray MC2R and human MC2R, vertebrates that last shared a common ancestor over 420 million years ago, the amino acid sequence identity is 37% (positions in red). Given the apparent role of the Hypothalamus/Pituitary/Adrenal (HPA) axis and the Hypothalamus/Pituitary/Interrenal (HPI) axis in maintaining the fitness of vertebrates (
Figure 5

Amino acid sequence identity of MC2R orthologs. (A) The amino acid sequences of human (h) MC2R and stingray (s) MC2R were aligned. (B) The amino acid sequences of gar (g) MC2R and zebrafish (z) MC2R (XP_005158229) were aligned. The position of critical amino acids in the proposed HFRW-binding site (
For ray-finned fishes, such as the gar or zebrafish (Class Actinopterygii), MC2R primary sequence conservation is higher (55%; Figure 5B), and this condition may reflect the close interaction with MRAP1. That interaction most likely started in the ancestral bony fishes, and while the interaction may not have “rescued” MC2R functionality, the interaction appears to have stabilized the functional capabilities of teleost and tetrapod MC2R orthologs. Tetrapod MC2R orthologs show a similar level of primary sequence conservation. As a result, selection pressures on teleost and tetrapod MC2R orthologs may involve maintaining the close interaction between MRAP1 and MC2R. For the cartilaginous fishes, the MRAP1/MC2R relationship is unclear or may not exit, and the selection pressures to maintain MC2R primary sequence identity does not appear to be as strong. For example, in a recent study, on stingray MCRs (
The diminished primary sequence conservation for MC2R orthologs is in sharp contrast to the higher degree of primary sequence conservation for stingray and human MC5R orthologs (55%; Figure 6A). In addition, for two very distantly related bony fish MC5R orthologs (gar and fugu) the sequence identity was 73% (Figure 6B). These observations beg the question of the functional significance of the stability of MC5R orthologs during the radiation of the gnathostomes. For mammals, MC5R plays a role in exocrine gland secretion (
Figure 6

Amino Acid Sequence Identity of MC5R Orthologs. (A) The amino acid sequences of human (h) MC5R (NP_ 005904.1) and stingray (s) MC5R (AY562212) are aligned. (B) The amino acid sequences of gar (g) MC5R and Takifugu rubripes (f) MC5R (AA06553.1; fugu) were aligned. The position of critical amino acids in the proposed HFRW-binding site (
Conclusion
While it has been nearly 25 years since the cloning of the first MCRs (
When considering the functional activation of the MCRs, the paralogs MC1R, MC3R, MC4R, and MC5R are activated through an HFRW-binding site on these receptors that appears to be highly conserved. However, the MC2R orthologs of teleosts and tetrapods appear to utilize an additional binding site for the R/KKRR motif in gnathostome ACTH. Recent studies on cartilaginous fish MC2R orthologs suggest that a single-binding site may be all that is needed for the activation of these receptors (
Finally, while the role for MC2R orthologs in the HPA/HPI axis seems very clear, the role of the MC5R orthologs in the physiology of non-mammalian vertebrates is not resolved. The possibility that MC2R and MC5R may be functioning in the same cells should be considered.
Statements
Author contributions
The author confirms being the sole contributor of this work and approved it for publication.
Funding
This research was supported by the Long Research Fund (University of Denver).
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Footnotes
1.^http://esharkgenome.imcb.a-star.edu.sg
2.^https://blast.ncbi.nlm.nih.gov/Blast.cgi
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Summary
Keywords
melanocortin receptors, MRAP1, MRAP2, MC2R, MC5R, evolution
Citation
Dores RM (2016) Hypothesis and Theory: Revisiting Views on the Co-evolution of the Melanocortin Receptors and the Accessory Proteins, MRAP1 and MRAP2. Front. Endocrinol. 7:79. doi: 10.3389/fendo.2016.00079
Received
08 April 2016
Accepted
17 June 2016
Published
28 June 2016
Volume
7 - 2016
Edited by
Nicole Gallo-Payet, University of Sherbrooke, Canada
Reviewed by
Stacia A. Sower, University of New Hampshire, USA; Erica Crespi, Washington State University, USA; Jose Miguel Cerda-Reverter, Consejo Superior de Investigaciones Científicas, Spain; Patricia M. Hinkle, University of Rochester Medical Center, USA; Gert Flik, Radboud University Nijmegen, Netherlands
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Copyright
© 2016 Dores.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Robert M. Dores, rdores@du.edu
Specialty section: This article was submitted to Neuroendocrine Science, a section of the journal Frontiers in Endocrinology
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