Abstract
Many mosquito-borne viruses (arboviruses) are endemic in Africa, contributing to systemic and neurological infections in various geographical locations on the continent. While most arboviral infections do not lead to neuroinvasive diseases of the central nervous system, neurologic diseases caused by arboviruses include flaccid paralysis, meningitis, encephalitis, myelitis, encephalomyelitis, neuritis, and post-infectious autoimmune or memory disorders. Here we review endemic members of the Flaviviridae and Togaviridae families that cause neurologic infections, their neuropathogenesis and host neuroimmunological responses in Africa. We also discuss the potential for neuroimmune responses to aide in the development of new diagnostics and therapeutics, and current knowledge gaps to be addressed by arbovirus research.
Introduction
Recent studies indicate that climate changes in Africa may lead to a shift in vector-borne diseases from malaria to arboviruses due to differential effects of warming temperatures on the mosquito species that transmit these pathogens to humans [summarized in ()]. Thus, neurotropic arboviruses that are transmitted by Aedes aegypti, and cycle between wildlife and livestock or humans in west sub-Saharan Africa, are likely to emerge in other areas of Africa where the current climates supports Anopheles gambiae transmission of malaria (, ). Recent epidemics of yellow fever (YFV) and Rift Valley fever (RVFV) viruses in Nigeria and Uganda (, ), respectively, and emergence of West Nile virus (WNV) in the Darfur region () are consistent with these predictions. In addition, the United Nations estimates suggest an increase in global population of 37% by 2050 (), which facilitates transmission of vector-borne diseases through higher population densities and international travel. While the majority of infections with neurotropic arboviruses are asymptomatic, many persons develop flu-like symptoms that progress to neuroinvasive diseases in approximately half of symptomatic patients. In addition, 50-70% of survivors of CNS arboviral infection go on to develop neurocognitive and neuropsychiatric disorders that worsen over time (). In this subsection, we will review the epidemiology, pathophysiology, and value of neuroimmune changes in diagnostics and therapeutics of medically important, African mosquito-borne neurotropic arboviruses. We will also provide current knowledge gaps and perspectives regarding future research in neurotropic arboviruses.
Overview of African Mosquito-Borne Arboviruses That Induce Neuroinvasive Diseases in Humans
The etiologic agents of arboviral neuroinvasive diseases occur within three virologic genera: Flaviviridae, Togaviridae, and Bunyaviridae. The Phlebovirus RVFV (Phenuiviridae family) has been recently and extensively reviewed (–). Categorization of these RNA viruses, their key attributes, types of neuroinvasive diseases they cause, in addition to geographic epidemiology, and pathophysiology for medically relevant Flaviviridae and Togaviridae family members are summarized below (see Table 1).
Table 1
| Family | Virus | Vector | Geographical distribution | Systemic illnesses | Neurological diseases |
|---|---|---|---|---|---|
| Flaviviridae | WNV | Mosquito (Culex) | Africa, Mediterranean region, Central Asia, India, Europe, North, Central and South Americas | Flu-like illness | Meningitis, flaccid paralysis, encephalitis, myelitis, memory disorders, Parkinsonism |
| ZIKV | Mosquito (Aedes), Sexual transmission | Africa, India, Southeast Asia, Carribean islands, Central, North and South Americas | Flu-like illness with arthralgias, conjunctivitis | Meningoencephalitis, ADEM, GBS, memory disorders | |
| DENV | Mosquito (Aedes), | Africa, the Americas, the Eastern Mediterranean, South-East Asia and the Western Pacific | Fever, headache, pain behind the eyes, muscle pain, fatigue, nausea, vomiting, rash, bleeding hemorrhagic fever/shock | Encephalopathy, encephalitis, Guillain-Barre syndrome, transient muscle dysfunctions, neuro-ophthalmic involvement | |
| Togaviridae | CHIKV | Mosquito (Aedes) | Subsaharan Africa | Fever, rash, arthralgias, myalgias | Rare encephalitis, GBS |
| SINV | Mosquito (Culex) | Northeastern, Central and Southern Africa | Fever, rash, arthralgias, myalgias | Rare encephalitis |
African arboviruses: vectors, geographical distribution, and the illnesses they cause in adults.
WNV, West Nile virus; ZIKV, Zika virus; DENV, dengue virus; CHIKV, Chikungunya virus; SINV, Sindbis virus.
Flaviviridae
Members of the Flaviviridae family of viruses are enveloped, with a positive single-strand RNA genome of 9-13 Kb with that replicates as a single open reading frame (ORF) with genes for three structural and seven nonstructural (NS) proteins (). Structural proteins, which comprise the virion, consist of the viral capsid and the envelope glycoproteins. NS proteins are essential for replication of the viral genome, transcription and translation of viral genes, viral assembly, and may modulate immune function to promote infection and dissemination within humans. Phylogenetic trees indicate that all vector-borne flavirviruses originated in Africa, likely from non-vectored mammalian viruses (). Medically important, neurotropic flaviviruses that cause CNS disease in Africa are transmitted by Culex (West Nile encephalitis viruses; WNV), and Aedes (Zika virus; ZIKV, Dengue virus; DENV) mosquito species (). WNV was first isolated from a febrile patient in the West Nile district of Uganda in 1937, while ZIKV was first identified in a rhesus monkey from the African regions in Kampala, Uganda, in the Zika forest in 1947 (, ). A DENV epidemic was first reported in 1823 in the Zanzibar Islands (). WNV human cases occur in most African countries throughout the continent with the exception of the western Sahara desert, Mauritania, Mali, Burkina Faso, Niger, northern Chad, Libya, and Angola () (Figure 1). ZIKV outbreaks in humans have occurred in only nine countries: Senegal, Cote D’Ivoire, Burkina Faso, Nigeria, Cameroon, Gabon, Central African Republic, Ethiopia, and Angola (Figure 1). DENV, which exists as four closely related but distinct serotypes, is endemic in almost all African countries, with the exception of Morocco, Algeria, Tunesia, Western Sahara, Niger, Chad, Sudan, Gambia, Guinea-Bissa, Guinea, Sierra Leone, Liberya, Ivory Coast, Central African Republic, South Sudan, Congo, Burundi, Botswana, Zimbabwe, Swaziland, and Lesotho (Figure 1). Both WNV and ZIKV may also be transmitted via transfusion of human blood products, and ZIKV can also be transmitted via sexual contact, primarily with males.
Figure 1
WNV and ZIKV are neurotropic viruses that can cause acute flu-like illnesses with fever, headache, rash, pharyngitis, diarrhea, arthralgias, conjunctivitis, and myalgias (
Neurological diseases associated with DENV infection were first reported in 1976 as atypical symptoms of dengue infection, and their incidence rates have varied from 0.5% to 20% (
Dengue serotypes 2 and 3 are most commonly associated with neurological symptoms (
The pathogenesis of WNV and ZIKV CNS infections in humans is incompletely defined, although excellent mouse models have illuminated mechanisms of immune control in the periphery and central nervous system (CNS) (
Figure 2

Mechanisms of arbovirus entry into the CNS. Arboviruses enter the CNS via three routes: (A, B) Retrograde transport of virus along axon microtubules (MT) of peripheral neurons allows entry into the spinal cord. (C) Infection of olfactory sensory neurons (OSNs) in the olfactory neuroepithelium (ONE) following infection from fenestrated capillaries (FC) allows viral intra-axonal migration through the cribiform plate (CP), followed by transynaptic infection of mitral cells (MC) at the glomeruli (G) of the olfactory bulb (OB). (D) Virus entry through the blood brain barrier (BBB) occurs via transcellular transport of virions, paracellular migration of virions following disruption of tight junctions (TJs), or via transmigration of infected leukocytes.
Once WNV or ZIKV enter the CNS, they infect and injure neurons (or neuroprogenitor cells in the case of ZIKV) through direct (virus infection-induced) and indirect (immune-mediated) mechanisms (58, 59). Microscopic examination of the post-mortem CNS specimens may reveal neuronal cell death, microglial activation, infiltrating macrophages, and accumulation of CD4+ and CD8+ T cells (60, 61). Depending on the flavivirus, these lesions can occur in the brainstem, cerebral cortex, hippocampus, thalamus, cerebellum or spinal cord. While it is well established that both humoral and cell-mediated immune responses critically control viral replication in peripheral tissues, virologic control within the CNS predominantly requires the infiltration of antiviral mononuclear cells (62–64). Viral replication within neurons is detected by the cytoplasmic RNA helicases RIG-I and MDA5, which signal through the adaptor protein mitochondrial antiviral signaling protein (MAVS) to promote antiviral gene expression and proinflammatory proteins, including T cell chemoattractants in both neurons and activated astrocytes and microglia (
Togaviridae
Members of the Togaviridae family of viruses are small, enveloped viruses with single-stranded positive-sense RNA genomes of 10–12 kb that encode five structural and four NS proteins (68). Two thirds of the genome of alphaviruses encodes the non-structural polyprotein(s) in a single ORF immediately after a 5′-non-coding region. Overlapping with the 3′-end of the non-structural ORF, there is a promoter for transcription of a subgenomic mRNA from which the structural polyprotein is translated (69). The genus Alphavirus comprises a large group of medically important mosquito-borne viruses that are transmitted by Aedes (Chikungunya virus; CHIKV), and Culex (Sindbis virus; SINV) (
CHIKV and SINV generally cause febrile syndromes with rashes and joint pain, and are only occasionally associated with neurologic diseases. CHIV infection is asymptomatic in up to 25% of human infections, with symptomatic cases presenting with fever, headache, myalgia, arthritis, conjunctivitis, nausea/vomiting, maculopapular rash and incapacitating bilateral and symmetric polyarthralgia, which may relapse or persist for months to years (72). Rare neurologic complications include seizures, acute flaccid paralysis, Guillain-Barré syndrome, cranial nerve palsies, myelitis, encephalopathy, and meningoencephalitis (73). Persons at risk for CNS disease include neonates exposed intrapartum, older adults (e.g., > 65 years), and persons undergoing immunosuppression for solid organ transplant (74). Case fatality rate for CHIKV encephalitis ranges from 4-28%, with higher rates mostly in older adults. Electroencephalogram in patients with neurologic signs may exhibit slow background activity and generalized epileptiform discharges, while brain MRI may show bilateral white matter hyperintensities and/or focal encephalitis. Postmortem brain examination of a patient who succumbed to CHIKV encephalitis revealed lymphocytic infiltrates with focal necrosis in the hippocampus, frontal lobes and medulla oblongata (75). While many SINV infections are asymptomatic, cases usually present with a maculopapular, pruritic exanthema over the trunk and limbs, mild fever, and arthralgia, particularly in wrists, hips, knees, and ankles, sometimes accompanied by nausea, general malaise, headache, and myalgia (76). Patients can experience persistent joint manifestations that continue for months or years, and in rare cases as a chronic arthritis. SINV is known to cause neurologic disease in horses (77), but human cases are extremely rare.
The mechanisms of CHIKV and SINV neuroinvasion in humans are unknown; however, animal models suggest entry may occur via invasion of brain endothelial cells and retrograde axonal transport, respectively (78) (Figure 2). Studies examining CHIKV and SINV infection of the CNS in murine models report multiple sites of neuronal and astrocyte infection progressing to cell death via caspase-mediated pathways, with microgliosis and perivascular cuffs (75, 79–82). Similar to reports in human cases of CHIKV encephalitis (75), neuronal degeneration in the hippocampus and lymphocytic meningitis is also observed in animals. As with flavivirus encephalitis, CHIKV RNA is detected in the brain by pattern recognition receptors, such as toll-like receptor(TLR)-3, that upregulate innate immune antiviral molecules that can reduce viral replication (83). While increased expression of the T cell cytokine IFNγ has been observed in animal models, mechanisms of T cell trafficking and virologic control within the brain have not been investigated. Likewise, there have been no reports of long-term follow-up in survivors of CHIKV neurologic diseases.
Can Neuroimmune Responses Aide in Diagnostics and/or Therapeutics?
The diagnosis of arboviral neuroinvasive diseases requires virus-specific assays so that novel therapies, such as antibody-based therapeutics, and patient prognoses can be accurately administered. Studies attempting to identify virus-specific innate or adaptive immune pathways via genomic approaches in animal models have been instrumental in identifying the critical antiviral pathways that control and clear virus (84, 85), but have failed to support the use of pathway analysis for diagnostic purposes. Knowledge regarding the status of BBB permeability may also be critical for treating acute neuroinvasive diseases. For example, animal studies examining patterns of BBB function throughout the course of flavivirus encephalitis indicate that induction of interferon responses may promote BBB closure via Rac1-mediated effects on TJ integrity (
Knowledge Gaps for Future Research
One of the challenges for limiting arboviral neuroinvasion and dissemination within the CNS is the incomplete knowledge regarding virus-specific entry receptors expressed at the BBB and by neural cells, including those involved in trans-synaptic spread between CNS regions. Entry receptors postulated to be involved in flavivirus entry include αvβ3 integrins, C-type lectin receptors (CLR), phosphatidylserine receptors TIM (T-cell immunoglobulin and mucin domain) and TYRO3, AXL and MER (TAM) family of receptor tyrosine kinases (90, 91). Attachment and entry receptors for CHIKV include glycosaminoglycans (GAGs), T-cell immunoglobulin and mucin 1 (TIM-1), and the cell adhesion molecule Mxra8 (92). While many of these receptors are expressed at CNS barriers and within the parenchyma, the demonstration these receptors are required for brain endothelial and neural cell entry is currently lacking. There is also a dire need to identify biomarkers that identify survivors of arboviral neuroinvasive diseases at risk for neurological sequelae, including neurocognitive impairments. Post-infectious neurocognitive sequelae modeled in murine models show benefit from administration of anakinra, a USFDA approved medication that targets the IL-1R for the treatment of rheumatoid arthritis, during acute encephalitis (93). Given the essential role of the IL-1R, in CNS virologic control, it is unclear whether the risk-benefit ratio supports use of this drug in humans with arboviral encephalitis. Future studies are needed to better identify and define safe therapeutic targets to limit the entry and dissemination of neurotropic arboviruses, and to prevent the development of neuroimmune processes that contribute long-term sequelae.
Funding
This work was supported by NIH grants R35NS122310.
Publisher’s Note
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Statements
Author contributions
The author confirms being the sole contributor of this work and has approved it for publication.
Acknowledgments
The author wishes to thank Dr. Matthew Cain for Biorender illustration (Figure 2).
Conflict of interest
The author declares that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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Summary
Keywords
alphavirus biology, neuroimmunology, Flavivirus, Africa, CNS
Citation
Klein RS (2021) Encephalitic Arboviruses of Africa: Emergence, Clinical Presentation and Neuropathogenesis. Front. Immunol. 12:769942. doi: 10.3389/fimmu.2021.769942
Received
02 September 2021
Accepted
17 November 2021
Published
23 December 2021
Volume
12 - 2021
Edited by
Willias Masocha, Kuwait University, Kuwait
Reviewed by
Hikoaki Fukaura, Saitama Medical University, Japan; Maria Reyes-Mantilla, Johns Hopkins Medicine, United States
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Copyright
© 2021 Klein.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Robyn S. Klein, rklein@wustl.edu
This article was submitted to Multiple Sclerosis and Neuroimmunology, a section of the journal Frontiers in Immunology
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