ORIGINAL RESEARCH article

Front. Microbiol., 18 October 2022

Sec. Microbiotechnology

Volume 13 - 2022 | https://doi.org/10.3389/fmicb.2022.959018

Fermentation quality, bacterial community, and aerobic stability of ensiling Leymus chinensis with lactic acid bacteria or/and water after long-term storage

  • 1. College of Foreign Languages, Inner Mongolia University of Finance and Economics, Hohhot, China

  • 2. Inner Mongolia Key Laboratory of Microbial Ecology of Silage, Inner Mongolia Engineering Research Center of Development and Utilization of Microbial Resources in Silage, Inner Mongolia Academy of Agriculture and Animal Husbandry Science, Hohhot, China

  • 3. Institute of Microbiology, Chinese Academy of Sciences, Beijing, China

Abstract

Leymus chinensis is a major forage resource for herbivores on typical steppe and meadow steppes in Northern China. This study aimed to reveal the fermentation quality, bacterial community, and aerobic stability of L. chinensis silage treated with lactic acid bacteria or/and water after long-term storage. Leymus chinensis was harvested at the heading stage and ensiled with lactic acid bacteria [LAB, 2.00 ml/kg fresh weight (FW) of LAB, L], water (100 ml/kg FW of distilled water, W), or a combination of both [2.00 ml/kg fresh weight (FW) of LAB and 100 ml/kg FW of distilled water, LW] in polyethylene laboratory-scale silos (diameter, 20 cm; height, 30 cm) at a density of 650 kg/m3. As a control silage (CK), untreated L. chinensis silage was also assessed. The samples were taken at 0 day of opening after 300 days of ensiling (CK_0d, L_0d, W_0d, and LW_0d) and at 10 days of opening (CK_10d, L_10d, W_10d, and LW_10d). The fermentation quality, microbial counts, bacterial community, and aerobic stability of the silage were assessed. The CK_0d contained higher pH and aerobic bacteria count, and lower LA and BC concentrations than L_0d, W_0d, and LW_0d (p < 0.05), and the LAB and yeasts were only detected in CK at 0 day of opening. Lactobacillus had the most abundance among bacterial genera in all silages at 0 day of opening. Just CK had 2°C above the ambient temperature during aerobic exposure (at 224 h). During aerobic exposure, the pH and microbial counts in CK increased (p < 0.05), and Lactobacillus in L and LW had decreasing abundance (p < 0.05). The CK_10d had higher pH and microbial counts, and lower lactic acid and buffering capacity than L_10d, W_10d, and LW_10d (p < 0.05). At 10 days of opening, the coliforms and yeasts were just detected in CK, and Lactobacillus also had the most abundance among bacterial genera in all silages at 10 days of opening. Overall, inoculating LAB and adding water improved the fermentation quality and the aerobic exposure of L. chinensis silage after long-term storage. The activities of coliforms and yeasts during aerobic exposure contributed to the aerobic deterioration of L. chinensis silage without any treating. Lactobacillus dominated the bacterial communities of all silage at 0 and 10 days of opening. During aerobic exposure, the abundance of Lactobacillus reduced in L. chinensis silage treated with LAB or water.

Introduction

Leymus chinensis is one of the dominating grasses, a major forage resource for herbivores, and mostly utilized for grazing and haymaking on typical steppe and meadow steppes in Northern China (; ). Its quality, palatability, and productivity were affected by the seasonal changes (), and it is difficult to provide high-quality L. chinensis year-round under grazing and haymaking systems (). Ensiling is a satisfactory method for preserving L. chinensis to overcome the above shortcomings (; ). However, the insufficient epiphytic lactic acid bacteria (LAB) and the low moisture content (less than 600 g/kg) in materials negatively affect the fermentation process and the microbial dynamics and induce the Enterobacteriaceae succession in L. chinensis silage (; ). Previous studies reported that inoculating LAB at ensiling can improve the fermentation quality, aerobic stability, and digestibility of L. chinensis silage (; ; ). Moreover, revealed that ensiling L. chinensis with LAB or/and water promotes the fermentation process and LAB succession during fermentation and improves the fermentation quality in the terminal silage, and Enterobacteriaceae dominates the bacterial community during late fermentation phase (from 35 to 60 days) in the silage treated with water.

The previous studies mainly focused on the characteristics of L. chinensis silage during short-term storage (less than 100 days). Those included the dynamics of bacterial community and fermentation quality from 0 to 60 days of ensiling (), the effects of inoculating LAB, growing locations and stages, and chopping length on the fermentation quality or/and aerobic stability (; ,,, ; ; ), and the identification of LAB isolated from L. chinensis silage (). It is very important to study the characteristics of silage after long-term storage (more than 200 days), because silage is a kind of roughage that can be supplied to the ruminants year-round. Previous studied reported the microbial communities, fermentation quality, nutrition compositions, and aerobic stability of whole-plant corn silage after 300 and 350 days of storage (; ). Nevertheless, there are no reports of studies on the L. chinensis silage in this area. So, we hypothesized that there were differences in fermentation quality and microbial communities among L. chinensis silages treated with LAB or/and water after long-term storage. The objective of this study was to reveal the fermentation quality, bacterial community, and aerobic stability of ensiling L. chinensis with lactic acid bacteria or/and water at 300 days of storing.

Materials and methods

Silage preparation

Leymus chinensis was harvested at heading stage () from three sampling sites randomly selected as replicates on a commercial farm (in typical steppe, 116°29′37′′E, 44°13′10′′N, Inner Mongolia Caodu Grassland Husbandry Co., Ltd., Xilinhot, China) on 28 July 2019. The fresh forage from each site was separately chopped into 2- to 3-cm pieces using a chaff cutter (Hongguang Industry & Trade Co., Ltd., Zhejiang, China), mixed thoroughly, and divided into four batches (15 kg for each batch) for four treatments as follows: CK, 2.00 ml/kg fresh weight (FW) of distilled water; L, 2.00 g/t FW of LAB inoculant and 2.00 ml/kg FW of distilled water; W, 100 ml/kg FW of distilled water; LW, 2.00 g/t FW of LAB inoculant and 100 ml/kg FW of distilled water. There were three replications per treatment. The LAB inoculant was bought from Xinlaiwang Biotechnology Co., Ltd, Yangzhou, China, and its compositions were Lactobacillus plantarum (≥6 × 1010 colony-forming units (CFUs)/g) and Lactobacillus casei (≥4 × 1010 CFU/g). After mixing each treatment uniformly for all samples from each site, approximately 14 kg of each forage sample was packed into two polyethylene laboratory-scale silos (diameter, 20 cm; height, 30 cm; approximately 6.2 kg for each silo) at a density of 650 kg/m3. The 24 silos (4 treatments × 3 replicates × 2 opening time) were stored at ambient temperature (22–25°C) and sampled at 300 days of storage to determine the aerobic stability, fermentation quality, microbial counts, bacterial community, and nutritional components.

Sampling and aerobic stability assessment

The silos were opened after 300 days of ensiling. For each sampling site per treatment (two silos), one silo selected randomly was sampled at 0 day of opening (CK_0d, L_0d, W_0d, and LW_0d), and the other silo was used to assess the aerobic stability (silage temperature) according to and and sampled at 10 days of opening (CK_10d, L_10d, W_10d, and LW_10d). Those samples were used to measure the fermentation quality, microbial counts, bacterial community, and nutritional components of silage. The silage temperature and the ambient temperature were measured by an inserting SMOWO Multi-Channel Data Logger (MDL-1048A; Shanghai Tianhe Automation Instrument Co., Ltd., Shanghai, China).

Fermentation quality

The silage samples (approximately 500 g per sample) were dried in a forced-air oven (BPG-9240A, Shanghai Yiheng Scientific Instrument Co., Ltd., Shanghai, China) for 48 h to measure the dry matter (DM) content and then ground through a 1-mm screen with a mill (FS-6D; Fichi Machinery Equipment Co., Ltd., Shandong, China) for measuring buffering capacity (BC) and nutritional components.

The fermentation quality was analyzed from silage extract. Fresh silage (25 g) and sterile water (225 ml) were homogenized for 100 s using a flap-type sterile homogenizer (JX-05, Shanghai Jingxin Industrial Development Co., Ltd., Shanghai, China) and filtered through four layers of sterile cheesecloth (). The pH was measured by a pH meter (PB-10, Sartorius, Gottingen, Germany). The silage extract was filtrated through a filter membrane (0.22 μm) and then measured by a high-performance liquid chromatography (DAD, 210 nm, SPD-20A, Shimadzu Co., Ltd., Kyoto, Japan) to assess the organic acids [lactic, acetic, propionic, and butyric acid (LA, AA PA, and BA)] concentrations in silage. The conditions were as follows: detector, SPD-20A diode array detector, 210 nm; column, Shodex RS Pak KC-811, 50°C (Showa Denko K.K., Kawasaki, Japan); mobile phase, 3 mM HClO4, 1.0 ml/min ().

The silage extract was measured by a Kjeltec autoanalyzer (8400; Foss Co., Ltd., Hillerød, Denmark) using the Kjeldahl method to assess the ammonia nitrogen (AN) concentration in silage (). The powder sample was measured according to for assessing the buffering capacity (BC) in silage.

Microbial counts and bacterial community

The microbial counts in fresh forage or silage were assessed according to . Coliforms, aerobic bacteria, and yeasts were cultured on violet red bile agar, nutrient agar, and potato dextrose agar, respectively, in an incubator (LRH-70, Shanghai Yiheng Science Instruments Co., Ltd., Shanghai, China) at 30°C for 72 h. Moreover, LAB were cultured on Man, Rogosa, and Sharpe agar under anaerobic condition in the same incubator at 30°C for 72 h.

The bacterial DNA in the silage was extracted using an E.Z.N.A. ®Stool DNA Kit (D4015, Omega Bio-tek, Inc., GA, USA) following the manufacturer’s instructions. The V3-V4 region of the bacterial rRNA gene was amplified by a polymerase chain reaction (PCR) with primers 341F (5′-CCTACGGGNGGCWGCAG-3′) and 805R (5′-GACTACHVGGGTATCTAATCC-3′). The conditions were as follows: 98°C for 30 s followed by 32 cycles of denaturation at 98°C for 10 s, annealing at 54°C for 30 s, and extension at 72°C for 45 s, followed by a final extension at 72°C for 10 min (). The PCR products were purified by an AMPure XT beads (Beckman Coulter Genomics, Danvers, MA, USA) and then quantified by a Qubit (Invitrogen, USA). The purified and quantified PCR products were sequenced by an Illumina NovaSeq PE250 platform according to manufacturer’s recommendations, provided by LC-Bio (Hangzhou Lianchuan Biotechnology Co., Ltd., Hangzhou, China). The paired-end reads were merged using FLASH. Principal component analysis (PCA) and bacterial community differences between 0 and 10 days of opening for each treatment were analyzed using R 3.6.1. Sequencing data were submitted to the NCBI Sequence Read Archive database (accession number: PRJNA841435).

Nutrition compositions

The total nitrogen (TN) in fresh forage or silage was detected by a Kjeltec autoanalyzer (8400; Foss Co., Ltd., Hillerød, Denmark) with copper as the catalyst according to the Kjeldahl method, and the TN multiplied by 6.25 was crude protein (CP) concentration in silage. The neutral detergent fiber (NDF) and acid detergent fiber (ADF) concentrations were assessed by an ANKOM fiber analyzer (ANKOM 2000, ANKOM Technology, Macedon, NY, USA) without heat-stable amylase according to the method of . The ash concentration in silage was assessed according to .

Statistical analyses

The differences between 2 opening times (0 and 10 days of opening) for each treatment (1) and among 4 treatments (CK, L, W, and LW) for each opening time (2) were analyzed with the GLM procedure of SAS (SAS System for Windows, version 9.1.3; SAS Institute Inc., Cary, NC, USA). The statistical model is as follows:

where Xi is the observation, μ is the overall mean, αi is the effect of opening time (k = 0 and 10 days of opening), and εi is the error.

where Xj is the observation, μ is the overall mean, βj is the effect of treatments (j = CK, L, W, and LW), and εj is the error.

Results

Characteristics of fresh forage

The characteristics of L. chinensis before ensiling are presented in Table 1.

TABLE 1

ItemspHMicrobial countsDMNutritional compositionsBC


LABColiformsAerobic bacteriaYeastCPWSCNDFADFAsh
Fresh L. chinensis5.953.496.126.744.174879.886.2335618454.9218
SD0.0610.4490.0940.0880.4327.220.1150.3135.693.211.686.22

The pH, microbial counts (log colony-forming units/g fresh weight), dry matter (DM, g/kg), nutritional compositions concentrations (g/kg DM), and buffering capacity (BC, mE/kg DM) in fresh Leymus chinensis (n = 3).

LAB, lactic acid bacteria; CP, crude protein; WSC, water soluble carbohydrates; NDF, neutral detergent fiber; ADF, acid detergent fiber. SD, standard deviation.

Aerobic stability

The temperature of CK began to rise at 150 h of opening and had 2°C above the ambient temperature at 224 h of opening (Figure 1). However, other treatments did not reach to 2°C above the ambient temperature during 10 days of opening.

FIGURE 1

Fermentation quality

At 0 day of opening, the CK contained higher pH but lower LA and BC than other treatments (p < 0.01), the L contained lower LA and BC than W and LW (p < 0.01), and the W contained higher AN and BC than other treatments (p < 0.01) (Table 2). At 10 days after opening, the CK contained higher pH and lower LA and BC than other treatments (p < 0.01), the L contained higher pH and lower LA than W and LW (p < 0.01), the W contained higher pH than LW and higher BC than L (p < 0.01). The CK_0d had lower pH than CK_10d (p < 0.01), the L_0d contained higher LA and BC contents than L_10d (p < 0.01), the W_0d contained higher pH, AN, and BC than W_10d (p < 0.05), and LW_0d contained higher BC than LW_10d (p < 0.05). The inoculating LAB, adding water, and opening time had main effect on pH, LA, AN, and BC (p < 0.05), and the adding water and opening time had main effect on AA (p < 0.05).

TABLE 2

ItemsCKLWLWSEMp-value
pH0 d5.29Ba3.96b3.88Ab3.72b0.070<0.001
10 d6.36Aa3.88b3.80Bc3.68d0.018<0.001
SEM0.0940.0360.0160.017
p-value0.0010.1870.0230.119
LA0 d4.20c14.8Ab29.6a24.8a2.13<0.001
10 d2.80c9.33Bb18.5a20.2a1.45<0.001
SEM0.6860.3453.231.52
p-value0.228<0.0010.0710.096
AA0 d14.79.9016.519.22.840.205
10 d10.76.0810.313.62.140.179
SEM1.8751.1313.932.25
p-value0.2040.0770.3240.151
AN0 d1.45b1.87b5.91Aa2.06b0.311<0.001
10 d1.841.712.42B2.100.2420.247
SEM0.2320.4070.2950.064
p-value0.3080.7990.0010.681
BC0 d307d468Ac508Aa493Ab2.30<0.001
10 d265c447Bb488Ba473Bab9.02<0.001
SEM11.63.214.053.50
p-value0.0620.0090.0260.017

The pH, organic acid concentrations [g/kg dry matter (DM)], ammonia nitrogen/total nitrogen (AN, g/kg total nitrogen), and buffering capacity (BC, mE/kg DM) in Leymus chinensis silages (n = 3).

CK, ensiling L. chinensis with 2.00 m/kg fresh weight (FW) of distilled water; L, ensiling L. chinensis with 2.00 g/t FW of lactic acid bacteria (LAB) inoculant and 2.00 ml/kg FW of distilled water; W, ensiling L. chinensis with 100 mL/kg FW of distilled water; LW, ensiling L. chinensis with 2.00 g/t FW of LAB inoculant and 100.0 ml/kg FW of distilled water. LA, lactic acid; AA, acetic acid. Values with different lowercase letters (a, b, c, and d) indicate significant differences among treatments on the same day (p < 0.05). Values with different uppercase letters (A and B) indicate the significant differences between 0 and 10 days of opening for the same treatment (p < 0.05). SEM, standard error of the means.

Microbial counts

At 0 day of opening, the LAB and yeasts were only detected in CK, with the highest aerobic bacteria count (p < 0.01); moreover, the L and LW contained lower aerobic bacteria count than other treatments (p < 0.01) (Table 3). At 10 days of opening, coliforms and yeasts were also only detected in CK, with the highest LAB and aerobic bacteria counts (p < 0.01); moreover, the aerobic bacteria count in LW was higher than that in L and lower than that in CK and W (p < 0.01). Furthermore, the CK_10d and LW_10d contained higher aerobic bacteria count than CK_0d and LW_0d, respectively (p < 0.05). The LAB, coliforms, aerobic bacteria, and yeasts counts were mainly affected by inoculating LAB, adding water, and opening time (p < 0.01).

TABLE 3

ItemsCKLWLWSEMp-value
LAB0 d3.81BaNDNDND0.045<0.001
10 d6.55Aa2.91Ab2.75Ab3.01Ab0.135<0.001
SEM0.1500.0490.0440.071
p-value<0.001< 0.001<0.001<0.001
Coliforms0 dNDNDNDND
10 d4.79AaNDNDND0.254<0.001
SEM0.359
p-value<0.001
Aerobic bacteria0 d5.07Ba3.39c4.13b3.54Bc0.124<0.001
10 d5.89Aa3.53d4.18b3.76Ac0.047<0.001
SEM0.0930.1500.0400.050
p-value0.040.5540.4020.039
Yeasts0 d5.25BaNDNDND0.062<0.001
10 d6.19AaNDNDND0.066<0.001
SEM0.128
p-value0.007

Microbial counts (log colony-forming units/g fresh weight) in Leymus chinensis silages (n = 3).

CK, ensiling L. chinensis with 2.00 ml/kg fresh weight (FW) of distilled water; L, ensiling L. chinensis with 2.00 g/t FW of lactic acid bacteria (LAB) inoculant and 2.00 ml/kg FW of distilled water; W, ensiling L. chinensis with 100 ml/kg FW of distilled water; LW, ensiling L. chinensis with 2.00 g/t FW of LAB inoculant and 100.0 ml/kg FW of distilled water. Values with different lowercase letters (a, b, c, and d) indicate significant differences among treatments on the same day (p < 0.05). Values with different uppercase letters (A and B) indicate the significant differences between 0 and 10 days of opening for the same treatment (p < 0.05). SEM, standard error of the means. LAB, lactic acid bacteria. ND, not detected.

Bacterial diversity

At 0 day of opening, the LW contained the lower valid tags than CK and L (p < 0.05), and the L contained the lower Simpson index than other treatments (p < 0.01) (Table 4). At 10 days of opening, the CK and LW contained higher valid tags than L and W (p < 0.01), and the CK contained lower observed OTUs, and Shannon and Chao1 indexes than other treatments (p < 0.01). The L_10d contained lower valid tags and higher Shannon and Simpson indexes than L_0d (p < 0.05); in addition, W_10d had higher Shannon and Simpson indexes than W_0d (p < 0.05).

TABLE 4

ItemsCKLWLWSEMp-value
Raw tags0 d8416685351826918452411960.499
10 d8409879658757648380650660.630
SEM1222366960691550
p-value0.9710.3340.3650.638
Valid tags0 d79920a81657Aa69574ab65639b30250.014
10 d78094a61773Bb59659b77947a32900.006
SEM1402153145423875
p-value0.409<0.0010.4050.201
Observed OTUs0 d20424019122431.80.710
10 d125b240a237a277a21.80.006
SEM30.714.926.933.0
p-value0.1440.9760.7620.139
Shannon0 d2.851.91B3.45B3.450.3840.066
10 d2.47b4.02Aa4.78Aa4.69a0.3470.005
SEM0.2140.5240.2100.414
p-value0.2810.0460.0110.101
Simpson0 d0.712a0.358Bb0.768Ba0.736a0.0640.006
10 d0.6510.764A0.863A0.8330.0570.124
SEM0.0650.0840.0090.058
p-value0.5690.027<0.0010.482
Chao10 d21225420122934.20.728
10 d129b246a240a281a22.00.006
SEM32.517.428.833.5
p-value0.1440.7670.7990.162
Goods coverage0 d1.001.001.001.00
10 d1.001.001.001.00
SEM
p-value

Sequencing data and alpha diversity of bacteria in Leymus chinensis silages (n = 3).

CK, ensiling L. chinensis with 2.00 ml/kg fresh weight (FW) of distilled water; L, ensiling L. chinensis with 2.00 g/t FW of lactic acid bacteria (LAB) inoculant and 2.00 ml/kg FW of distilled water; W, ensiling L. chinensis with 100 ml/kg FW of distilled water; LW, ensiling L. chinensis with 2.00 g/t FW of LAB inoculant and 100.0 ml/kg FW of distilled water. Values with different lowercase letters (a and b) indicate the significant differences among treatments on the same day (p < 0.05). Values with different uppercase letters (A and B) indicate the significant differences between 0 and 10 days of opening for the same treatment (p < 0.05). SEM, standard error of the means.

According to PCA, the CK_0d_1 and CK_0d_3 had separated bacterial community from the CK_0d_2 and CK_10d, which had clustered bacterial community (Figure 2). The bacterial community of L_0d was clustered and clearly distinct from L_10d, which had separated bacterial community from each other. The W_0d_3 had separated bacterial community from the W_0d_1, W_0d_2, and W_10d, which had clustered bacterial community. The LW_0d and LW_10d_1 had clustered bacterial community, but the LW_10d had separated bacterial community.

FIGURE 2

Bacterial community

Lactobacillus was the most bacterial genus in CK_0d, L_0d, W_0d, and LW_0d, with the abundance of 39.0, 84.6, 44.7, and 70.6%, respectively, followed by Bacillus (20.9%), Escherichia (12.0%), and Sporolactobacillus (11.9%) in CK_0d, and Leclercia (12.1%), Pantoea (9.50%), Enterobacter (6.78%), and Escherichia (5.73%) in W_0d (Figure 3). At 10 days of opening, the abundance of Lactobacillus increased to 74.9% in CK_10d and to 45.1% in W_10d, respectively, and reduced to 48.4% in L_10d and to 48.7% in LW_10d, respectively. Bacillus, Escherichia, and Sporolactobacillus reduced to as minor taxa in CK_10d, with the abundance of 0.12, 0.88, and 0%, respectively. The abundances of Escherichia and Acinetobacter in L_10d increased to 3.59 and 20.1%, respectively. In W_10d, the abundances of Leclercia, Pantoea, and Enterobacter decreased to 0.69, 1.31, and 2.05%, respectively; however, Escherichia and Escherichia increased to 7.37 and 4.29%, respectively. In LW_10d, the Bacillus and Ralstonia increased to 3.67 and 5.15% from 2.44 to 2.50% at 0 day, respectively, whereas Sphingomonas decreased to 1.78% from 4.36% at 0 day.

FIGURE 3

The CK_10 d contained higher Pediococcus, but lower Escherichia and Enterobacter than CK_0 d (p < 0.05) (Figure 4). The L_10d contained higher Acinetobacter and Enhydrobacter, whereas lower Lactobacillus than L_0 d (p < 0.05). The W_10 d contained higher Acinetobacter and Ralstonia, and lower Klebsiella and Bacillus than W_0 d (p < 0.05). The LW_10 d contained higher Escherichia, and lower Lactobacillus than LW_0 d (p < 0.05).

FIGURE 4

Nutrition compositions

At 0 and 10 days of opening, the DM content in L contained was higher than that in CK whereas lower than that in W and LW (p < 0.01); moreover, at 0 day of opening, the ash concentration in LW was higher than that in CK but lower than that in W (p < 0.01) (Table 5). The CP concentrations in L_10d and W_10d were lower than that in L_0d and W_0d, respectively (p < 0.05); nevertheless, the NDF and ADF concentrations in L_10d and LW_10d were higher than those in L_0d and LW_0d, respectively (p < 0.05).

TABLE 5

ItemsCKLWLWSEMp-value
DM0 d591a544b491c485c5.10<0.001
10 d581a544b497c489c2.46<0.001
SEM4.774.822.933.09
p-value0.1890.9630.2020.345
CP0 d10.09.47A9.77A9.870.2700.522
10 d9.219.31B9.35B9.580.1500.404
SEM0.4200.0140.0730.110
p-value0.2290.0010.0150.132
NDF0 d351354B382362B15.30.509
10 d407400A398414A14.00.845
SEM21.67.4115.210.6
p-value0.1400.0120.5070.025
ADF0 d180185B202186B7.930.297
10 d197209A203213A7.430.486
SEM12.33.535.646.32
p-value0.3680.0080.8450.035
Ash0 d53.1c56.4ab57.5a55.3b0.430<0.001
10 d54.255.957.356.30.7560.099
SEM0.6030.2470.3810.971
p-value0.2670.1610.7290.494

The dry matter content (DM, g/kg) and nutritional compositions concentrations (g/kg DM) of Leymus chinensis silages (n = 3).

CK, ensiling L. chinensis with 2.00 ml/kg fresh weight (FW) of distilled water; L, ensiling L. chinensis with 2.00 g/t FW of lactic acid bacteria (LAB) inoculant and 2.00 ml/kg FW of distilled water; W, ensiling L. chinensis with 100 ml/kg FW of distilled water; LW, ensiling L. chinensis with 2.00 g/t FW of LAB inoculant and 100.0 ml/kg FW of distilled water. CP, crude protein; NDF, neutral detergent fiber; ADF, acid detergent fiber. Values with different lowercase letters (a, b, and c) indicate the significant differences among treatments on the same day (p < 0.05). Values with different uppercase letters (A and B) indicate the significant differences between 0 and 10 days of opening for the same treatment (p < 0.05). SEM, standard error of the means.

Discussion

Leymus chinensis silage is one of the main forages for ruminants on meadow and typical steppes in Inner Mongolia, Northern China, throughout year. However, the previous studies concerned mainly the short fermentation process of L. chinensis silage (less than 100 days) (; ; ; ). In the study, the fermentation quality, bacterial community, and aerobic stability of L. chinensis silage after long-term (300 days) fermentation were studied, which can help to provide the high-quality L. chinensis silage to ruminants all year-round.

In the study, the scores and marks of all silages were 100 and first, respectively, according to the evaluation system for a fermentation quality based on butyric and acetic acids contents in silage (), owing to no butyric acid detected and acetic acid content less than 30 g/kg DM in all silages. Those indicated that the L. chinensis silage at 300 days of storage had satisfactory fermentation quality. There were higher AA than LA in CK_0d (14.7 vs. 4.20 g/kg, Table 2), which was in line with the results of previous studies about L. chinensis silage (; ). Moreover, Enterobacteriaceae in CK_0d had 17.7% of abundance and was one of the main dominant families (Supplementary Figure 1). reported that Enterobacteriaceae dominates the bacterial community and utilizes the LA to AA and other products during fermentation (from 5 to 60 days) in L. chinensis silage without any treatment. Those resulted in the unique fermentation quality (AA > LA) of CK_0d in the study. Previous studies revealed that low moisture content and insufficient LAB count in the material were the main factors restricting the fermentation of L. chinensis silage (; ; ; ). In the study, ensiling L. chinensis with LAB or/and water improves the fermentation quality of silage, as reflected by the lower pH and higher LA content in L_0d, W_0d, and LW_0d than those in CK_0d (Table 2). The similar results were also detected by in L. chinensis silage. Moreover, reported that inoculating LAB can decrease pH and increase LA concentration in native grass silage with low moisture content (407 g/kg). In the study, the W_0d contained higher AN content than other treatments, which might be in connection with a higher abundance of Enterobacteriaceae in W_0d (Supplementary Figure 1). Enterobacteriaceae has ability to degrade protein to AN in silage during fermentation (). Moreover, the AN content in all silages was kept low level (from 1.45 to 5.91 g/kg TN), because of the low moisture content (less than 515 g/kg) and the long-term storage (300 days) inhibiting the activity of harmful microbe in L. chinensis silages. The bacterial activity during fermentation contributes most strongly to BC of silage and inoculating LBA or/and adding water can make the bacterial more active during early stage of fermentation in L. chinensis silage (), which resulted in higher BC in L_0d, W_0d, and LW_0d that in CK_0d in the study. In addition, found that the volatile components (organic acids and AN) have a declining concentration in L. chinensis silage after 35 days of storing. So, in the study, the concentrations of LA, AA, and AN kept in low level (Table 2) and the relevant mechanisms need to be further studied.

The LAB and yeasts were only detected in CK at 0 day of opening, and CK_0d contained the higher aerobic bacteria count than other treatments with pH less than 4.0 and DM content more than 480 g/kg after 300 days of ensiling (Tables 2, 3, 5). also reported that the LAB, aerobic bacteria, and yeasts counts had a declining trend in L. chinensis silage with LAB or/and water after 5 days of storage. However, the LAB and yeasts were detected in whole-plant corn silage at 300 and 350 days of storage with more than 620 g/kg of moisture and less than 3.7 of pH (; ). Those indicated that the LAB and yeasts in L. chinensis silage became inactivated after long storage (300 days) under low pH (< 4.00) and moisture condition (<515 g/kg).

The previous study reported that Lactobacillus has the highest abundance in L. chinensis silage at 60 days of storage (); in the study, Lactobacillus was the most dominant bacterial genus in all silages (from 39.0 to 84.6%) at 300 days of storage (Figure 3). Those indicated that Lactobacillus dominate generally the bacterial community of L. chinensis silage from 60 to 300 days of storage. Moreover, Lactobacillus dominated the bacterial community of native grass silage with LAB at 30 and 60 days of storage (; ). Previous studies reported that Lactobacillus was also the main bacterial genus in whole-plant corn silage at 300 days of storage (), but Acinetobacter dominated the bacterial community in whole-plant corn silage at 350 days of storage (). At 0 day of opening, the CK had higher of abundance of Bacillus than other treatments (Figure 3), owing to the higher pH in CK_0d (Table 2). Bacillus likely present in the silage with high pH (). The CK_0d and W_0d contained higher Escherichia than L_0d and LW_0d (Supplementary Figure 2); moreover, the similar results were reported in our previous study (). This indicated that inoculating LAB at ensiling L. chinensis effectively inhibit Escherichia, as potentially pathogenic microorganism, in silage from 60 to 300 days. Sporolactobacillus, as one of the LAB genera, was detected in whole-plant corn silage for the first time (; ). It is a facultative anaerobic, spore-forming, and gram-positive bacterium and can convert sugar to D-lactic acid (). In the study, Sporolactobacillus was one of the main bacterial genera (11.9%) in CK_0d (Figure 3). Although Sporolactobacillus has antifungal activities in whole-plant corn silage with from 30 to 40% of DM (), yeasts were detected in CK_0d with 60% of DM. The reason might be that the lower moisture in L. chinensis silage limits the ability to inhibit fungi. Leclercia was one of the main bacterial genera (12.1%) in W_0d (Figure 3) and detected in silage for the first time in the study. The W_0d had 3.88 pH and contained 509 g/kg of moisture, which indicated that Leclercia has strong resistance to the high acidic and low moisture environment. Moreover, Leclercia is probably an opportunistic pathogen that occasionally causes extraintestinal infections in humans () and its effect on silage needs further study.

In the study, during 10 days after opening, CK had 2°C above the ambient temperature (at 224 h of opening), but other treatments had less than 2°C above the ambient temperature (Figure 1). Previous studies reported that the temperature of L. chinensis silage after 45 and 90 days of storage was 2°C higher than the ambient temperature at less than 140 h of opening (; ). Moreover, during aerobic exposure, the coliforms and yeast counts increased in CK, but were not detected in other treatment (Table 3). Those indicated that L. chinensis silage after long-term storage (300 days) had greater aerobic stability than that after short-term storage (<100 days), and the coliforms and yeasts contributed to the aerobic deterioration of L. chinensis silage after long-term storage. In the study, L_10d, W_10d, and LW_10d had lower pH than L_0d, W_0d, and LW_0d, respectively, although the differences between L_10d and L_0d and LW_10d and LW_0d did not reach the significant level (Table 2). Moreover, the previous studies also reported that the pH reduces or does not change in the first 2 or 3 days of aerobic exposure in L. chinensis silage (,), in whole-plant corn silage (; ; ), in alfalfa silage (), smooth bromegrass silage (), and in Napier grass silage (). Those indicated that the pH in silage commonly has a decreasing trend or does not change during initial stage of aerobic exposure. The LA and AA concentrations in all treatments had no difference (except LA in L), but reduced from 0 to 10 days of opening; moreover, the BC in L, W, and LW decreased from 0 to 10 days of opening (Table 2). Those suggested that the reducing BC might contribute mainly to the reducing pH during aerobic exposure in L. chinensis silage treated with LAB or/and water in the study. The L_10d, W_10d, and LW_10d contained lower LAB and aerobic bacteria counts than CK_10d; moreover, in L_10d, W_10d, and LW_10d, coliforms and yeasts were not detected, pH was less than 4.0, and moisture content was less than 515 g/kg (Tables 2, 3). It indicated that the acidic and low moisture condition in L. chinensis silage treated with LAB or/and water after long-term storage might be the main factors for inhibiting the microbial activity during aerobic exposure. However, previous studies reported that the microbial counts (except coliforms) kept high level during aerobic exposure in whole-plant corn silage after long-term storage (more than 300 days) with pH less than 3.50 and moisture content more than 600 g/kg (; ).

In the study, the abundance of Lactobacillus in CK increased considerably from 0 to 10 days of opening, without a significant level (Figures 3, 4A), owing to the sample of CK_0d_2 with similar bacterial community with CK_10d (Figure 1A). The rising abundance of Lactobacillus during aerobic exposure was also detected in whole-plant corn silage and in sugarcane top silage, with Lactobacillus as not the most dominated bacterial genus in silage at opening day (; ). However, Lactobacillus in L and LW had a reducing abundance from 0 to 10 days (Figures 3, 4B,D); the similar results were also detected in sugarcane top silage and in barley silages, with Lactobacillus as the most dominated bacterial genus in silage at opening day (; ). In addition, compared with W_0d, W_10d had no different Lactobacillus, lower Klebsiella, but higher Bacillus and Acinetobacter (Figure 4C). The dynamics of microbial communities during aerobic exposure need further study in L. chinensis silage after long-term storage (more than 300 days).

Conclusion

The L. chinensis silage after long-term storage (300 days) had satisfactory fermentation quality and aerobic stability. Inoculating LAB and adding water could improve fermentation quality and aerobic stability and increase the abundance of Lactobacillus in L. chinensis silage. The lower pH and moisture condition were the main factors for inhibiting the microbial activity in L. chinensis silage. During aerobic exposure, the reducing BC in L. chinensis silage treated with LAB or/and water mainly contributed to the decreasing or no difference in pH; moreover, the abundance of Lactobacillus reduced in L. chinensis silage treated with LAB or water.

Statements

Data availability statement

The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/Supplementary material.

Author contributions

HX, YX, and JZ designed the study, wrote the manuscript, and reviewed and edited the manuscript. HX, YX, NN, NW, YZ, LS, MQ, and TW performed the experiments. HX and YX analyzed the data. YX and JZ funded and supervised the experiments. All authors reviewed the manuscript.

Funding

This work was funded by the Strategic Priority Science and Technology Project of Chinese Academy of Sciences (Category A) (grant number XDA26040201), the National Natural Science Foundation of China (grant number 32160342), the Science and Technology Project of Inner Mongolia (grant numbers 2020GG0049 and 2021GG0068), Sustainable Development of Ecological Grassland of Inner Mongolia (grant number 2022CYZX04), and the Science and Technology Project of Xilingol League (grant number 202107).

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

Supplementary material

The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fmicb.2022.959018/full#supplementary-material

Supplementary Figure 1

The relative abundance of bacterial community (family level) in Leymus chinensis silages at 0 and 10 days of opening (n = 3). CK, ensiling L. chinensis with 2.00 m/kg fresh weight (FW) of distilled water; L, ensiling L. chinensis with 2.00 g/t FW of lactic acid bacteria (LAB) inoculant and 2.00 m/kg FW of distilled water; W, ensiling L. chinensis with 100 ml/kg FW of distilled water; LW, ensiling L. chinensis with 2.00 g/t FW of LAB inoculant and 100.0 ml/kg FW of distilled water.

Supplementary Figure 2

Difference in bacterial communities (genus level) in Leymus chinensis silages among CK, L, W, and LW at 0 day of opening for each treatment (n = 3). CK, ensiling L. chinensis with 2.00 ml/kg fresh weight (FW) of distilled water; L, ensiling L. chinensis with 2.00 g/t FW of lactic acid bacteria (LAB) inoculant and 2.00 ml/kg FW of distilled water; W, ensiling L. chinensis with 100 ml/kg FW of distilled water; LW, ensiling L. chinensis with 2.00 g/t FW of LAB inoculant and 100.0 ml/kg FW of distilled water.

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Summary

Keywords

bacterial diversity, Leymus chinensis silage, microbial counts, nutritional compositions, silage temperature

Citation

Xu H, Xue Y, Na N, Wu N, Zhao Y, Sun L, Qili M, Wang T and Zhong J (2022) Fermentation quality, bacterial community, and aerobic stability of ensiling Leymus chinensis with lactic acid bacteria or/and water after long-term storage. Front. Microbiol. 13:959018. doi: 10.3389/fmicb.2022.959018

Received

01 June 2022

Accepted

26 September 2022

Published

18 October 2022

Volume

13 - 2022

Edited by

Nídia S. Caetano, Instituto Superior de Engenharia do Porto (ISEP), Portugal

Reviewed by

Waroon Khota, Khon Kaen University, Thailand; Zhifei Zhang, Hunan Agricultural University, China

Updates

Copyright

*Correspondence: Yanlin Xue, Jin Zhong,

†These authors have contributed equally to this work and share first authorship

This article was submitted to Microbiotechnology, a section of the journal Frontiers in Microbiology

Disclaimer

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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