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ORIGINAL RESEARCH article

Front. Microbiol.

Sec. Food Microbiology

Volume 16 - 2025 | doi: 10.3389/fmicb.2025.1655390

This article is part of the Research TopicDiversity, Function, and Application of Microbes in the Fermentation or Production of Traditional FoodView all 22 articles

Fermentation of Kefir with Traditional Freeze-Dried Starter Cultures Successfully Recreates Fresh Culture Fermented Kefir

Provisionally accepted
Maanasa  Mudoor SooreshMaanasa Mudoor Sooresh1Ashani  JayawickramaAshani Jayawickrama1Amaya  SilvaAmaya Silva1Sally  NguyenSally Nguyen1Sheri  SchmidtSheri Schmidt2,3James  J HarynukJames J Harynuk2,3Benjamin  P WillingBenjamin P Willing1*Benjamin  C.T. BourrieBenjamin C.T. Bourrie1,4*
  • 1University of Alberta Department of Agricultural, Food, and Nutritional Sciences, Edmonton, Canada
  • 2University of Alberta Department of Chemistry, Edmonton, Canada
  • 3The Metabolomics Innovation Centre, Edmonton, Canada
  • 4MacEwan University, Edmonton, Canada

The final, formatted version of the article will be published soon.

Interest in fermented foods and their purported health benefits has led to increased scientific research investigating the development of starter cultures which maintain the characteristics of traditional products while allowing for industrial scale production. One such fermented food that is gaining steady attention for industrial production is kefir. To improve the ease of use and maintenance of starter cultures without compromising desirable fermentation characteristics and potential health benefits, this study investigated the impact of freeze-drying a previously described reconstituted kefir consortia with two lyoprotectants trehalose and milk. The reconstituted kefir community consisted of 5 bacterial species (Lentilactobacillus kefiri, Lactobacillus kefiranofaciens, Lactococcus cremoris, Leuconostoc mesenteroides and Acetobacter pasteurianus) and 4 yeast species (Saccharomyces cerevisiae, Pichia fermentans, Monosporozyma unispora, and Kluyveromyces marxianus) previously developed by our group which has shown promise in reducing plasma cholesterol levels and cardiovascular disease risk factors in both mouse and human trials. We tested the effect of freeze drying on the viability of the microbes and conducted kefir fermentations comparing fresh and freeze-dried starter cultures. Completed kefir fermentations were compared for pH, microbial composition, volatile compounds, organic acids, and sugar consumption. We found that all starter cultures were able to ferment milk to a similar pH, however the freeze-dried cultures prepared with milk took a longer time to complete fermentation. The total bacterial and yeast counts were comparable across the fermentations performed as was the composition of bacteria and yeast present as determined by shotgun metagenomic sequencing. High performance liquid chromatography (HPLC) analysis showed no difference in the levels of lactic acid, acetic acid, ethanol, glucose, and galactose. Additionally, solid-phase microextraction followed by two-dimensional gas chromatography-time-of-flight mass spectrometry (SPME-GC×GC-TOFMS) showed that kefir fermented with freeze-dried starter cultures did not change the volatile profile compared to fresh cultures. Together these findings indicate that freeze-dried starter cultures consisting of traditional kefir microorganisms are able to recreate the fresh starter culture version of this product. This provides encouraging evidence for the development of commercially viable starter cultures that are capable of recreating traditional functional fermented foods.

Keywords: Fermented foods & beverages, Kefir, Starter culture fermentation, Metabolomics, Freeze - drying

Received: 27 Jun 2025; Accepted: 12 Sep 2025.

Copyright: © 2025 Mudoor Sooresh, Jayawickrama, Silva, Nguyen, Schmidt, Harynuk, Willing and Bourrie. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence:
Benjamin P Willing, willing@ualberta.ca
Benjamin C.T. Bourrie, bourrieb@macewan.ca

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.