Frontiers in Microbiology

Original Research

Accepted on 09 May 2025

Multi-omics analyses reveal the alteration of gut microbial thiamine production in obesity

in Microorganisms in Vertebrate Digestive Systems

Yu XIA
Longya Lu
Yanyan Qiu
Lulu Wang
Xingyin Liu
Weihong GE

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1516393

105 views

Review

Published on 09 May 2025

Relationship between pediatric asthma and respiratory microbiota, intestinal microbiota: a narrative review

in Systems Microbiology

Lian Liu
Wenqi Zhao
Han Zhang
Yunxiao Shang
Wanjie Huang
Qi Cheng

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1550783

1,290 views

Original Research

Published on 09 May 2025

Tracheal and cloacal bacterial diversity of red listed Eastern Imperial Eagle (Aquila heliaca)

in Microorganisms in Vertebrate Digestive Systems

Marine Murtskhvaladze
Levan Ninua
Nika Budagashvili
Ekaterine Tevdoradze
Zurab Gurgenidze
Adam Kotorashvili
Nato Kotaria
Alexander Gavashelishvili
Zurab Javakhishvili

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1477032

1,646 views

Original Research

Published on 09 May 2025

Prolonged effect of antibiotic therapy on the gut microbiota composition, functionality, and antibiotic resistance genes’ profiles in healthy stool donors

in Microorganisms in Vertebrate Digestive Systems

Ramin Karimianghadim
Reetta Satokari
Sam Yeo
Perttu Arkkila
Dina Kao
Sepideh Pakpour

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1589704

1,507 views

Original Research

Published on 09 May 2025

Unveiling the hidden allies of industrial chicory—a metagenomic exploration of rhizosphere microbiota and their impact on productivity and plant health

in Microbe and Virus Interactions with Plants

Lalie Leclercq
Sony Debarre
Emily Lloret
Bernard Taminiau
Georges Daube
Caroline Rambaud
Djamel Drider
Ali Siah
Bruno Desprez
Jean-Louis Hilbert

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1509094

633 views

Original Research

Published on 07 May 2025

Cold water swimming reshapes gut microbiome to improve high-fat diet-induced obesity

in Microorganisms in Vertebrate Digestive Systems

Jie Men
Chenglong Cui
Hao Li
Zhaowei Li
Yu Zhang
Zhiyu Liu
Qi Wang
Penghong Liu
Shuangling Zou
Zhengyang Yu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1589902

1,017 views

Original Research

Published on 02 May 2025

Unveiling the impact of 16S rRNA gene intergenomic variation on primer design and gut microbiome profiling

in Systems Microbiology

Sirinthorn Sunthornthummas
Rujipat Wasitthankasem
Pimonwan Phokhaphan
Nirinya Sudtachat
Alisa Wilantho
Chumpol Ngamphiw
Wanwisa Chareanchim
Sissades Tongsima

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1573920

1,790 views

Original Research

Published on 02 May 2025

A metaproteomic analysis of the piglet fecal microbiome across the weaning transition

in Microbial Physiology and Metabolism

Israel Rivera
KaLynn Harlow
Robert N. Cole
Robert O’Meally
Wesley Garrett
Weili Xiong
William Oliver
James E. Wells
Katie Lynn Summers
Nisan Chhetri

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1504433

1,449 views

Original Research

Published on 30 Apr 2025

The tongue coating microbiome is perturbed in atrial fibrillation and partly normalized after catheter ablation

in Microorganisms in Vertebrate Digestive Systems

Ling Wang
Na Li
Yuchen Zheng
Qiong Huang
Guangying Cui
Xiaoshuai Cheng
Yu He
Yifei Niu
Yumei Sun
Xiaoming Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1508089

1,063 views

Original Research

Published on 29 Apr 2025

Beneficial soil microbiome profiles assembled using tetramycin to alleviate root rot disease in Panax notoginseng

in Microbe and Virus Interactions with Plants

Lianjin Liu
Zongqing Wang
Cheng Luo
Yinglong Deng
Wentao Wu
Yongping Jin
Yuxuan Wang
Hongping Huang
Zhaoxia Wei
Youyong Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1571684

1,040 views

Original Research

Accepted on 28 Apr 2025

Microbial and Clinical Disparities in Pneumonia: Insights from Metagenomic Next-Generation Sequencing in Patients with Community-Acquired and Severe Pneumonia Running Head Comparative Analysis of Metagenomic Sequencing in Community-Acquired Pneumonia and Severe Pneumonia

in Infectious Agents and Disease

Luo Wang
Shuhua Zhang
Jinhuan Sun
Jianhui Xu
Weihua Huang
Ruiqing Hao
Ziyang Wen
Zhao Ou
Daiwei WANG
Guanhua Xiao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1538109

155 views

Original Research

Published on 28 Apr 2025

Comparative analysis of the soil microbiome and carbohydrate content of Anthoxanthum nitens (Sweetgrass) and other Poaceae grass tissues and associated soils

in Microbe and Virus Interactions with Plants

Marissa L. King
Barinder Bajwa
Naomi Hanna
Xiaohui Xing
Kristin E. Low
Patrick Neuberger
Erin Hall
Michael Veltri
Brett Weighill
Leeann Klassen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1384204

1,071 views

Editorial

Published on 28 Apr 2025

Editorial: Harnessing natural plant extracts and probiotics to enhance host-gut microbiome interactions

in Microbial Symbioses

Kaijun Wang
Chuanshe Zhou
Kang Xu
Jie Yin

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1607339

797 views

Original Research

Published on 28 Apr 2025

Discrepancies in the rumen microbiome, metabolome, and serum metabolome among Hu sheep, East Friesian sheep, and East Friesian × Hu crossbred sheep

in Microorganisms in Vertebrate Digestive Systems

Ruilin Du
Shuo Yan
Wenna Yao
Huimin Zhang
Yue Xue
Yulong Zhao
Guifang Cao
Jun Liu
Yong Zhang
Xihe Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1498050

949 views

Review

Published on 25 Apr 2025

Unlocking the gut-liver axis: microbial contributions to the pathogenesis of metabolic-associated fatty liver disease

in Microorganisms in Vertebrate Digestive Systems

Mykhailo Buchynskyi
Iryna Kamyshna
Iryna Halabitska
Pavlo Petakh
Oksana Kunduzova
Valentyn Oksenych
Oleksandr Kamyshnyi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1577724

1,963 views

Correction

Published on 25 Apr 2025

Corrigendum: Therapeutic potential of Litsea cubeba essential oil in modulating inflammation and the gut microbiome

in Food Microbiology

Liqiong Xia
Ran Li
Ting Tao
Ruimin Zhong
Haifang Du
Ziling Liao
Zhanghua Sun
Changqiong Xu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1610268

799 views

Multi-omics analyses reveal the alteration of gut microbial thiamine production in obesity

Relationship between pediatric asthma and respiratory microbiota, intestinal microbiota: a narrative review

Tracheal and cloacal bacterial diversity of red listed Eastern Imperial Eagle (Aquila heliaca)

Prolonged effect of antibiotic therapy on the gut microbiota composition, functionality, and antibiotic resistance genes’ profiles in healthy stool donors

Unveiling the hidden allies of industrial chicory—a metagenomic exploration of rhizosphere microbiota and their impact on productivity and plant health

Cold water swimming reshapes gut microbiome to improve high-fat diet-induced obesity

Unveiling the impact of 16S rRNA gene intergenomic variation on primer design and gut microbiome profiling

A metaproteomic analysis of the piglet fecal microbiome across the weaning transition

The tongue coating microbiome is perturbed in atrial fibrillation and partly normalized after catheter ablation

Beneficial soil microbiome profiles assembled using tetramycin to alleviate root rot disease in Panax notoginseng

Microbial and Clinical Disparities in Pneumonia: Insights from Metagenomic Next-Generation Sequencing in Patients with Community-Acquired and Severe Pneumonia Running Head Comparative Analysis of Metagenomic Sequencing in Community-Acquired Pneumonia and Severe Pneumonia

Comparative analysis of the soil microbiome and carbohydrate content of Anthoxanthum nitens (Sweetgrass) and other Poaceae grass tissues and associated soils

Editorial: Harnessing natural plant extracts and probiotics to enhance host-gut microbiome interactions

Discrepancies in the rumen microbiome, metabolome, and serum metabolome among Hu sheep, East Friesian sheep, and East Friesian × Hu crossbred sheep

Unlocking the gut-liver axis: microbial contributions to the pathogenesis of metabolic-associated fatty liver disease

Corrigendum: Therapeutic potential of Litsea cubeba essential oil in modulating inflammation and the gut microbiome

Discrepancies in the rumen microbiome, metabolome, and serum metabolome among Hu sheep, East Friesian sheep, and East Friesian × Hu crossbred sheep