Frontiers in Microbiology | Systems Microbiology

Original Research

Published on 05 May 2023

Assembly and analytical validation of a metagenomic reference catalog of human gut microbiota based on co-barcoding sequencing

in Systems Microbiology

Yufen Huang
Puzi Jiang
Zhengjiao Liang
Rouxi Chen
Zhen Yue
Xuefeng Xie
Changge Guan
Xiaodong Fang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1145315

2,834 views
3 citations

Original Research

Published on 02 May 2023

The identification of the new species Nitratireductor thuwali sp. nov. reveals the untapped diversity of hydrocarbon-degrading culturable bacteria from the arid mangrove sediments of the Red Sea

in Systems Microbiology

Ramona Marasco
Grégoire Michoud
Fatmah O. Sefrji
Marco Fusi
Chakkiath P. Antony
Kholoud A. Seferji
Alan Barozzi
Giuseppe Merlino
Daniele Daffonchio

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1155381

5,228 views
8 citations

Original Research

Published on 28 Apr 2023

Prediction of miRNA-disease associations in microbes based on graph convolutional networks and autoencoders

in Systems Microbiology

Qingquan Liao
Yuxiang Ye
Zihang Li
Hao Chen
Linlin Zhuo

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1170559

2,777 views
14 citations

Original Research

Published on 27 Apr 2023

Effects of zinc oxide and condensed tannins on the growth performance and intestinal health of weaned piglets in ETEC-challenged environment

in Systems Microbiology

Hongbo Yi
Zhikang Wang
Bijing Yang
Xuefeng Yang
Kaiguo Gao
Yunxia Xiong
Qiwen Wu
Yueqin Qiu
Shenglan Hu
Li Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1181519

2,880 views
5 citations

Original Research

Published on 27 Apr 2023

Effect of fermented heat-treated rice bran on performance and possible role of intestinal microbiota in laying hens

in Systems Microbiology

Yamei Wang
Weijiang Zheng
Wei Deng
Hua Fang
Heng Hu
He Zhu
Wen Yao

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1144567

3,073 views
5 citations

Original Research

Published on 27 Apr 2023

Geraniol attenuates virulence factors by inhibiting quorum sensing of Pseudomonas aeruginosa

in Systems Microbiology

Wen-Ru Li
Tao-Hua Zeng
Zhi-Qing Zhang
Qing-Shan Shi
Xiao-Bao Xie

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1190619

2,733 views
11 citations

Original Research

Published on 26 Apr 2023

Restorative effects of Lactobacillus rhamnosus LR-32 on the gut microbiota, barrier integrity, and 5-HT metabolism in reducing feather-pecking behavior in laying hens with antibiotic-induced dysbiosis

in Systems Microbiology

Chenxuan Huang
Qiaoxian Yue
Li Sun
Keqian Di
Duanli Yang
Erying Hao
Dehe Wang
Yifan Chen
Lei Shi
Rongyan Zhou

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1173804

4,874 views
7 citations

Original Research

Published on 26 Apr 2023

Identification of associations between lncRNA and drug resistance based on deep learning and attention mechanism

in Systems Microbiology

Meihong Gao
Xuequn Shang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1147778

2,711 views
9 citations

Original Research

Published on 26 Apr 2023

Optimizing the scale-up production of fermented astragalus and its benefits to the performance and egg quality of laying hens

in Systems Microbiology

Weiwei Dong
Zhanlei Fan
Panxian Li
Jun Liu
Guoping Sun
Nan Peng
Yunxiang Liang
Shumiao Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1165644

1,996 views
9 citations

Original Research

Published on 20 Apr 2023

DNA extraction protocol impacts ocular surface microbiome profile

in Systems Microbiology

Heleen Delbeke
Ingele Casteels
Marie Joossens

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1128917

3,807 views
7 citations

Mini Review

Published on 17 Apr 2023

Mammals’ sperm microbiome: current knowledge, challenges, and perspectives on metagenomics of seminal samples

in Systems Microbiology

María José Contreras
Kattia Núñez-Montero
Pablo Bruna
Ana Zárate
Felipe Pezo
Matías García
Karla Leal
Leticia Barrientos

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1167763

5,999 views
8 citations

Original Research

Published on 17 Apr 2023

Alterations in vaginal microbiota in uterine fibroids patients with ultrasound-guided high-intensity focused ultrasound ablation

in Systems Microbiology

Ping-Ping Zhang
Xue-Ping He
Wen Tang
Han-Wei Chen
Yuan-Yuan Han

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1138962

2,907 views
3 citations

Original Research

Published on 14 Apr 2023

Genetically supported causality between gut microbiota, gut metabolites and low back pain: a two-sample Mendelian randomization study

in Systems Microbiology

Mengchan Su
Yidan Tang
Weishuang Kong
Shuangyi Zhang
Tao Zhu

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1157451

10,166 views
18 citations

Original Research

Published on 14 Apr 2023

Fecal microbiome transplant from patients with lactation mastitis promotes mastitis in conventional lactating mice

in Systems Microbiology

Chao-Yue Kong
Yi-Qin Yang
Bing Han
Hui-Ling Chen
Yu-Qin Mao
Jia-Ting Huang
Li-Shun Wang
Zhan-Ming Li

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1123444

2,407 views

Original Research

Published on 13 Apr 2023

Integration of text mining and biological network analysis: Identification of essential genes in sulfate-reducing bacteria

in Systems Microbiology

Priya Saxena
Shailabh Rauniyar
Payal Thakur
Ram Nageena Singh
Alain Bomgni
Mathew O. Alaba
Abhilash Kumar Tripathi
Etienne Z. Gnimpieba
Carol Lushbough
Rajesh Kumar Sani

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1086021

4,020 views
11 citations

Original Research

Published on 12 Apr 2023

Humic acids alleviate dextran sulfate sodium-induced colitis by positively modulating gut microbiota

in Systems Microbiology

Jiazhang Huang
Pengfei Xu
Mingzhi Shao
Bin Wei
Cong Zhang
Jie Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1147110

2,929 views
10 citations