Frontiers in Microbiology | Systems Microbiology

Original Research

Published on 21 Nov 2022

Antibiotic resistance and host immune system-induced metal bactericidal control are key factors for microbial persistence in the developing human preterm infant gut microbiome

in Systems Microbiology

Samantha L. Peters
Michael J. Morowitz
Robert L. Hettich

Frontiers in Microbiology

doi 10.3389/fmicb.2022.958638

2,869 views
2 citations

Original Research

Published on 21 Nov 2022

Cellular memory of rapid growth is sensitive to nutrient depletion during starvation

in Systems Microbiology

Spencer Cesar
Jiawei Sun
Kerwyn Casey Huang

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1016371

3,110 views
3 citations

Original Research

Published on 17 Nov 2022

WLLP: A weighted reconstruction-based linear label propagation algorithm for predicting potential therapeutic agents for COVID-19

in Systems Microbiology

Langcheng Chen
Dongying Lin
Haojie Xu
Jianming Li
Lieqing Lin

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1040252

1,935 views
1 citation

Original Research

Published on 16 Nov 2022

Cow’s microbiome from antepartum to postpartum: A long-term study covering two physiological challenges

in Systems Microbiology

Johanna Tröscher-Mußotter
Simon Deusch
Daniel Borda-Molina
Jana Frahm
Sven Dänicke
Amélia Camarinha-Silva
Korinna Huber
Jana Seifert

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1000750

2,687 views
7 citations

Mini Review

Published on 15 Nov 2022

Advances in microbial metagenomics and artificial intelligence analysis in forensic identification

in Systems Microbiology

Qing He
Xueli Niu
Rui-Qun Qi
Min Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1046733

5,667 views
11 citations

Original Research

Published on 15 Nov 2022

Microbial communities in the liver and brain are informative for postmortem submersion interval estimation in the late phase of decomposition: A study in mouse cadavers recovered from freshwater

in Systems Microbiology

Linlin Wang
Fuyuan Zhang
Kuo Zeng
Wenwen Dong
Huiya Yuan
Ziwei Wang
Jin Liu
Jiaqing Pan
Rui Zhao
Dawei Guan

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1052808

2,915 views
6 citations

Original Research

Published on 11 Nov 2022

Phyllosphere microbial community of cigar tobacco and its corresponding metabolites

in Systems Microbiology

Tiantian Liu
Shiping Guo
Chongde Wu
Ruina Zhang
Qiu Zhong
Hongzhi Shi
Rongqing Zhou
Yanqing Qin
Yao Jin

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1025881

3,471 views
15 citations

Methods

Published on 10 Nov 2022

Combining p-values from various statistical methods for microbiome data

in Systems Microbiology

Hyeonjung Ham
Taesung Park

Frontiers in Microbiology

doi 10.3389/fmicb.2022.990870

3,224 views
5 citations

Review

Published on 08 Nov 2022

Seminal and vagino-uterine microbiome and their individual and interactive effects on cattle fertility

in Systems Microbiology

Sarah M. Luecke
Emily M. Webb
Carl R. Dahlen
Lawrence P. Reynolds
Samat Amat

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1029128

6,688 views
31 citations

Original Research

Published on 07 Nov 2022

Unraveling the effects of sulfamethoxazole on the composition of gut microbiota and immune responses in Stichopus variegatus

in Systems Microbiology

Chunming Tan
Wang Zhao
Weigeng Wen
Xu Chen
Zhenhua Ma
Gang Yu

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1032873

2,783 views
3 citations

Original Research

Published on 04 Nov 2022

A deep ensemble learning-based automated detection of COVID-19 using lung CT images and Vision Transformer and ConvNeXt

in Systems Microbiology

Geng Tian
Ziwei Wang
Chang Wang
Jianhua Chen
Guangyi Liu
He Xu
Yuankang Lu
Zhuoran Han
Yubo Zhao
Zejun Li

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1024104

4,573 views
28 citations

Original Research

Published on 03 Nov 2022

No evidence for a causal link between Helicobacter pylori infection and nonalcoholic fatty liver disease: A bidirectional Mendelian randomization study

in Systems Microbiology

Yuwei Liu
Hongqin Xu
ZiHan Zhao
Yutong Dong
Xiaomei Wang
Junqi Niu

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1018322

10,503 views
24 citations

Original Research

Published on 03 Nov 2022

Massively parallel single-cell genomics of microbiomes in rice paddies

in Systems Microbiology

Wataru Aoki
Masato Kogawa
Shuhei Matsuda
Keisuke Matsubara
Shintaro Hirata
Yohei Nishikawa
Masahito Hosokawa
Haruko Takeyama
Toru Matoh
Mitsuyoshi Ueda

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1024640

6,657 views
11 citations

Original Research

Published on 03 Nov 2022

A multi-omics machine learning framework in predicting the recurrence and metastasis of patients with pancreatic adenocarcinoma

in Systems Microbiology

Shenming Li
Min Yang
Lei Ji
Hua Fan

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1032623

2,234 views
5 citations

Original Research

Published on 01 Nov 2022

Genome-wide association study of Klebsiella pneumoniae identifies variations linked to carbapenems resistance

in Systems Microbiology

Na Pei
Wanying Sun
Jingxuan He
Yanming Li
Xia Chen
Tianzhu Liang
Karsten Kristiansen
Wenen Liu
Junhua Li

Frontiers in Microbiology

doi 10.3389/fmicb.2022.997769

4,004 views
8 citations

Original Research

Published on 31 Oct 2022

Geminicoccus flavidas sp. nov. and Geminicoccus harenae sp. nov., two IAA-producing novel rare bacterial species inhabiting desert biological soil crusts

in Systems Microbiology

Zhu-Ming Jiang
Yang Deng
Xue-Fei Han
Jing Su
Hao Wang
Li-Yan Yu
Yu-Qin Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1034816

2,972 views
9 citations