Your new experience awaits. Try the new design now and help us make it even better

ORIGINAL RESEARCH article

Front. Neurosci.

Sec. Brain Imaging Methods

Volume 19 - 2025 | doi: 10.3389/fnins.2025.1609547

This article is part of the Research TopicAI Innovations in Neuroimaging: Transforming Brain AnalysisView all 5 articles

Robust Multi-Task Feature Selection with Counterfactual Explanation for Schizophrenia Identification using Functional Brain Networks

Provisionally accepted
Xinyan  YuanXinyan Yuan1Shaolong  WeiShaolong Wei2*Ying  SunYing Sun1Lingling  GuLingling Gu1Yanyan  HeYanyan He1Tiantian  ChenTiantian Chen1Hongcheng  YaoHongcheng Yao3*Haonan  RaoHaonan Rao3
  • 1Department of Science, Jiangsu Vocational College of Business, Nantong, China, Nantong, China
  • 2School of Artificial Intelligence and Computer Science, Nantong University, Nantong, China
  • 3School of Information Science and Technology, Nantong University, Nantong, China, Nantong, China

The final, formatted version of the article will be published soon.

Functional brain networks measured by resting-state functional magnetic resonance imaging (rs-fMRI) have become a promising tool to reveal the underlying neural mechanisms of schizophrenia (SZ). However, although functional brain networks provide rich pathological information, directly analyzing their highdimensional features leads to insufficient model generalization ability and affects classification performance due to the high data dimension and small sample size. Therefore, how to effectively perform feature selection (FS) and extract stable and biologically meaningful functional connectivity (FC) features becomes a key challenge in SZ research. We propose a Robust Multi-Task Feature Selection with Counterfactual Explanation to enhance the accuracy and interpretability of SZ identification. Specifically, we preprocess rs-fMRI data and construct a functional connectivity matrix, extracting and sorting the upper triangular elements as features. Then, we develop a multi-task feature selection framework based on the Grey Wolf Optimizer (GWO) to screen out abnormal FC features in SZ patients. Finally, the counterfactual explanation model is used to minimize the perturbations of these abnormal FC features, returning the model prediction results to normal, thereby revealing the key connections that affect the classification decisions and improving the clinical interpretability of the method. Results on five real-world SZ datasets demonstrate that the proposed method not only outperforms existing methods in terms of accuracy but also provides a new perspective for the analysis of SZ.

Keywords: Schizophrenia, functional connectivity, RS-fMRI, Feature Selection, Counterfactual explanation

Received: 10 Apr 2025; Accepted: 01 Jul 2025.

Copyright: © 2025 Yuan, Wei, Sun, Gu, He, Chen, Yao and Rao. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence:
Shaolong Wei, School of Artificial Intelligence and Computer Science, Nantong University, Nantong, China
Hongcheng Yao, School of Information Science and Technology, Nantong University, Nantong, China, Nantong, China

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.