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ORIGINAL RESEARCH article

Front. Oncol.

Sec. Cancer Molecular Targets and Therapeutics

This article is part of the Research TopicPrecision Targeting in Cancer: Biomarker Discovery, AI-Guided Diagnostics, and Translational TherapeuticsView all articles

Mechanistic Insights into GPAA1-Mediated Cold Tumor Phenotype and Immune Evasion in Colorectal Cancer: Integrative Multi-Omics Analysis and Experimental Validation

Provisionally accepted
Jia  ZhuJia Zhu1Tao  ZhuTao Zhu1Yichen  CaiYichen Cai1Hancheng  FanHancheng Fan2*
  • 1Zhejiang University School of Medicine Sir Run Run Shaw Hospital, Hangzhou, China
  • 2Department of Clinical Laboratory, Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University,, Hangzhou, China

The final, formatted version of the article will be published soon.

Background: Glycosylphosphatidylinositol(GPI) Anchor Attachment Protein 1 (GPAA1) plays a critical role in GPI-anchor biosynthesis, yet its pan-cancer expression patterns and functional significance in Colorectal Cancer(CRC) remain unclear. Methods: We integrated multi-omics data (TCGA, GTEx, GEO, HPA) to analyze GPAA1 expression, immune infiltration, and genomic instability in CRC. Single-cell/spatial transcriptomics and functional assays (proliferation, migration, invasion) were performed to validate findings. Results: GPAA1 was significantly overexpressed in CRC (mRNA and protein, p < 0.05) and associated with poor prognosis. High GPAA1 correlated with genomic instability (aneuploidy, HRD) and an immune-cold phenotype (reduced CD8+ T cells, increased M2 macrophages). Functional assays confirmed GPAA1 promotes CRC aggressiveness. Conclusion: GPAA1 drives CRC progression via genomic instability and immunosuppression, serving as a prognostic biomarker and potential therapeutic target.

Keywords: GPAA1, colorectal cancer, COLD TUMOR, Immune Evasion, Tumor Microenvironment

Received: 08 Sep 2025; Accepted: 10 Nov 2025.

Copyright: © 2025 Zhu, Zhu, Cai and Fan. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Hancheng Fan, fhc@srrsh.com

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