Abstract
Drug-tolerant persister (DTP) cells are a subpopulation of cancer cells capable of surviving therapeutic stress through reversible, non-genetic adaptations. These cells contribute to minimal residual disease and eventual tumor relapse. Understanding the mechanisms that govern the entry into and exit from the DTP state—such as epigenetic remodeling, metabolic rewiring, and transcriptional plasticity—reveals actionable vulnerabilities. This article reviews the biological basis of DTP reversibility, outlines the major challenges in targeting these cells, and proposes innovative therapeutic strategies including epigenetic inhibitors, metabolic disruptors, and adaptive dosing regimens. We also highlight the importance of biomarker development and dynamic monitoring. Targeting DTP cells at their reversible stage may prevent permanent resistance, offering a promising avenue to improve treatment durability and patient outcomes in cancer therapy.
1 Introduction
The emergence of resistance to anticancer therapies remains one of the most significant challenges limiting long-term clinical outcomes for cancer patients (; ; ). Despite initial promising responses to targeted therapies and chemotherapy, many tumors inevitably recur due to acquired or intrinsic drug resistance (; ; ). In recent years, the recognition of DTP cells as a distinct, non-genetically driven state has provided new insights into the dynamics of drug resistance and tumor relapse (; ). Clinically, DTP cells have been significantly implicated in various malignancies, notably non-small cell lung cancer (NSCLC), melanoma, colorectal cancer, and breast cancer. In NSCLC, DTP cells mediate resistance to EGFR-targeted therapies such as osimertinib, resulting in tumor recurrence despite initial effective responses (; ). Similarly, melanoma frequently exhibits DTP cells after treatment with BRAF/MEK inhibitors, contributing to adaptive resistance and relapse (; ). Colorectal and breast cancers also harbor DTP populations following chemotherapy or targeted therapies, highlighting a broad clinical significance across diverse cancer types (). DTP cells constitute a subset of tumor cells characterized by their capacity to transiently evade cytotoxic or targeted therapies through adaptive, reversible phenotypic changes rather than stable genetic alterations ().
Initially described in bacterial populations that survive antibiotic exposure, the concept of persistence highlights a subpopulation of cells exhibiting reversible tolerance without acquiring permanent genetic mutations (). Analogously, cancer DTP cells exhibit several hallmark features, including slow cycling or quiescent phenotypes, altered metabolic states, and extensive transcriptomic and epigenetic reprogramming. Critically, the reversible nature of the DTP state allows these cells to re-enter active proliferation and re-establish drug-sensitive populations upon treatment withdrawal (). Thus, the reversible characteristics of DTP cells suggest both a biological vulnerability and a promising therapeutic opportunity.
Despite growing recognition of DTP cells in cancer therapy resistance, the molecular mechanisms governing their reversible state transitions remain poorly understood. The processes governing entry into, maintenance of, and exit from the DTP state are complex and remain only partially understood, involving epigenetic, metabolic, and transcriptional adaptations. This knowledge gap hampers the development of effective therapeutic strategies to eliminate these cells before they acquire stable resistance. In this mini-review, we summarize current insights into the biological basis of DTP reversibility, highlight the challenges in targeting this transient phenotype, and propose novel intervention strategies that exploit the unique vulnerabilities of DTP cells. By targeting this plastic state, we aim to inform approaches that prevent tumor relapse and improve long-term treatment outcomes.
2 Biological basis of DTP cell reversibility
DTP cells represent a transient, non-genetic phenotype of cancer cells capable of surviving prolonged drug exposure (; ). Central to their clinical significance is the remarkable reversibility of this state—DTP cells can exit the drug-tolerant phenotype upon cessation of treatment, reverting back to proliferative, drug-sensitive populations (; ). The underlying mechanisms enabling this reversible transition involve complex interplay between epigenetic modulation, transcriptional plasticity, metabolic rewiring, and microenvironmental interactions (illustrated in Figure 1).
FIGURE 1
2.1 Epigenetic regulation and chromatin remodeling
Epigenetic alterations constitute a critical factor driving both the induction and maintenance of the reversible DTP phenotype (
2.2 Transcriptional plasticity and gene regulatory networks
Reversible DTP formation is closely associated with transcriptional rewiring, enabling cells to adapt to therapeutic stress temporarily (
2.3 Metabolic reprogramming as an adaptive response
Reversible metabolic adaptations critically support the persistence phenotype (
Elevated OXPHOS activity not only supports reduced proliferation rates but also limits reactive oxygen species (ROS) accumulation, thereby protecting DTP cells from oxidative stress-induced death (
2.4 Influence of the tumor microenvironment (TME)
The reversibility of the DTP state is also regulated by dynamic interactions with the tumor microenvironment. Straussman et al. highlight how cytokines, growth factors, and paracrine signaling within the TME modulate DTP states by influencing intracellular signaling and transcriptional reprogramming (
Multiple studies have identified specific genes and signaling pathways underlying the DTP state. For instance, AXL, NGFR, KDM5A, and SOX2 have been linked to reversible persistence through regulation of chromatin remodeling, quiescence, and stress response programs. Additionally, IGF1R, STAT3, and YAP/TAZ signaling are frequently activated in persister cells across NSCLC, melanoma, and breast cancer models, promoting survival and resistance under drug pressure (
2.5 Dynamic entry and exit of DTP states
Collectively, the interplay between epigenetic modifications, transcriptional plasticity, metabolic rewiring, and microenvironmental influences ensures the rapid and reversible nature of the DTP cell state. Entry into the DTP state can be driven by selective expansion of pre-existing subpopulations or induced dynamically in response to therapeutic pressure, reflecting stochastic cell-state transitions. Importantly, as outlined in Figure 1, once the selective drug pressure subsides, these adaptive mechanisms lose their necessity, allowing cells to exit this transient tolerance state and reinitiate proliferation. Understanding these biological bases for DTP reversibility not only provides critical insights into cancer cell plasticity but also highlights novel vulnerabilities that could be therapeutically exploited. Targeting these adaptive, reversible processes may represent an effective strategy to eliminate or substantially delay tumor recurrence and improve long-term treatment outcomes.
3 Current challenges in targeting DTP cell reversibility
Despite the promising therapeutic potential offered by exploiting the reversibility of DTP cells, significant challenges currently limit effective targeting and clinical translation of this strategy. These challenges primarily relate to the dynamic complexity of the DTP phenotype, the lack of reliable biomarkers for detecting and monitoring these cells, and practical obstacles encountered in clinical settings.
3.1 Complexity and heterogeneity of DTP cell states
A major challenge lies in the inherent complexity and heterogeneity of DTP cells, both within and between tumor populations (
3.2 Lack of robust and specific biomarkers
Another major impediment is the absence of well-defined biomarkers capable of accurately identifying and tracking DTP cells in clinical samples (
3.3 Translational limitations and clinical challenges
Translating the biological insights gained from preclinical studies of DTP reversibility into effective clinical interventions presents additional practical challenges (
3.4 Risk of inducing stable resistance
An additional critical concern when therapeutically exploiting DTP reversibility is the risk of unintentionally facilitating the transition of persister cells into genetically stable, irreversibly resistant populations (
3.5 Limited preclinical and clinical models
Lastly, existing preclinical models inadequately reflect the clinical reality of cancer persistence, limiting their predictive value. Most experimental data on DTP cells derive from in vitro cell line studies or short-term animal xenograft models that poorly represent tumor complexity and heterogeneity in patients (
Addressing these diverse challenges through a multidisciplinary approach—integrating precise biomarker development, advanced modeling, carefully designed clinical studies, and cautious therapeutic timing—is paramount to fully exploiting DTP reversibility as a strategy for overcoming therapy resistance.
4 Innovative therapeutic intervention strategies
Given the complexity and dynamic nature of DTP cells, conventional monotherapies have proven insufficient for fully eliminating these adaptive populations. Thus, innovative therapeutic strategies aimed explicitly at exploiting the reversible characteristics of DTP cells are urgently needed, as summarized in Table 1. Emerging evidence provides a strong rationale for several promising intervention approaches, including combination therapies targeting epigenetic and metabolic vulnerabilities, intermittent or adaptive dosing strategies, and modulation of the tumor microenvironment.
TABLE 1
| Strategy | Target/Vulnerability | Example agents | Cancer types | Mechanism of action | References |
|---|---|---|---|---|---|
| Epigenetic Modulation | Histone demethylation, repressive chromatin | KDM5 inhibitors (CPI-455, ryuvidine), HDAC inhibitors | NSCLC, breast cancer | Reverses epigenetic silencing; sensitizes cells to therapy | |
| Metabolic Targeting | Mitochondrial respiration, FAO, antioxidant systems | OXPHOS inhibitors (IACS-010759), FAO inhibitors, GPX4 inhibitors, ALDH inhibitors (disulfiram) | AML, melanoma, lung cancer | Induces metabolic stress or ferroptosis in DTP cells | |
| Intermittent/Adaptive Dosing | Reversibility of drug-tolerance | — | Melanoma, NSCLC | Prevents transition to stable resistance; exploits DTP state plasticity | |
| Microenvironment Disruption | HGF/MET, IGF-1/IGF-1R, cytokine support | MET inhibitors (crizotinib), IGF-1R inhibitors (linsitinib) | NSCLC, pancreatic cancer | Blocks paracrine survival signals maintaining DTPs | |
| Combination Therapies | Multiple simultaneous vulnerabilities | Epigenetic + targeted drugs; metabolism + chemotherapy | Melanoma, breast cancer, NSCLC | Synergistically eliminates diverse DTP subpopulations | |
| Biomarker-Guided Precision Approaches | DTP-specific gene expression or phenotypic states | Single-cell RNA-seq, ALDH/AXL markers | Various solid tumors | Enables personalized treatment timing and monitoring |
Summary of therapeutic strategies targeting DTP cells.
4.1 Epigenetic targeting and chromatin modifying therapies
Epigenetic remodeling plays a pivotal role in driving reversible drug-tolerance phenotypes. Therefore, therapeutic agents targeting key epigenetic regulators represent promising avenues to disrupt DTP establishment and maintenance. For example, inhibitors targeting histone demethylases (such as KDM5 inhibitors like CPI-455 or ryuvidine) have demonstrated efficacy in preclinical models by preventing the reversible repression of chromatin states necessary for DTP survival (
4.2 Exploiting metabolic vulnerabilities of DTP cells
Metabolic reprogramming observed in DTP cells provides another therapeutic opportunity. As previously described, DTP cells shift toward increased dependence on mitochondrial oxidative phosphorylation (OXPHOS), fatty acid oxidation (FAO), and enhanced antioxidant responses. Targeting these altered metabolic pathways presents a potentially powerful strategy to specifically eradicate DTP cells. For instance, inhibition of mitochondrial OXPHOS through agents such as oligomycin or IACS-010759 significantly reduces persister cell viability in multiple cancer models (
4.3 Intermittent dosing and adaptive treatment strategies
Intermittent dosing, or “drug holiday” strategies, have emerged as innovative approaches specifically designed to exploit the reversible nature of DTP states (
4.4 Targeting the tumor microenvironment to disrupt persistence
The TME substantially influences DTP reversibility by providing paracrine support through growth factors, cytokines, and extracellular matrix remodeling. Innovative therapies aimed at disrupting key microenvironmental signals can thus eliminate protective niches essential for DTP survival. For instance, cancer-associated fibroblasts (CAFs) have been shown to secrete hepatocyte growth factor (HGF), which activates MET signaling in drug-tolerant tumor cells. This paracrine signaling contributes to the maintenance of a reversible DTP state after targeted therapy. In vivo studies have demonstrated that blocking the HGF-MET axis can resensitize tumor cells to EGFR inhibitors and suppress relapse in lung cancer models (
4.5 Integrating single-cell technologies and biomarker-guided strategies
The development and incorporation of innovative single-cell sequencing and high-resolution imaging technologies can revolutionize our capacity to identify, monitor, and target DTP populations dynamically (
4.6 Combined therapeutic modalities as the way forward
Given the multifaceted nature of DTP biology, it is increasingly evident that single-agent strategies are insufficient. Future therapeutic paradigms will likely require well-designed combinations of epigenetic modifiers, metabolic inhibitors, adaptive dosing schedules, and microenvironment-targeting agents (
In summary, innovative therapeutic strategies capitalizing on the reversible vulnerabilities inherent in DTP cells represent a promising frontier in cancer treatment. Through comprehensive targeting of epigenetic, metabolic, microenvironmental, and temporal dimensions of persistence, these approaches offer exciting opportunities to prevent tumor recurrence and improve long-term patient outcomes significantly. In addition to epigenetic and metabolic interventions, recent approaches have explored targeting the tumor microenvironment, inhibiting anti-apoptotic proteins (e.g., BCL2, MCL1), and utilizing immune checkpoint inhibitors in adaptive schedules. Preclinical models also suggest that targeting ferroptosis and inducing oxidative stress may selectively eliminate DTP cells, offering promising avenues for further exploration (
5 Critical controversies and knowledge gaps in the DTP field
Despite significant advancements in understanding drug-tolerant persister (DTP) cells, critical controversies and substantial knowledge gaps persist, hindering effective clinical translation. First, there remains a lack of consensus regarding the precise definition and identification criteria of DTP cells, as various studies utilize different molecular or phenotypic markers (
Additionally, current research models present significant limitations. Most experimental evidence is derived from simplified in vitro systems or short-term animal models that inadequately capture the complexity and heterogeneity of human tumors (
6 Conclusions and future perspectives
Effectively targeting the reversible nature of DTP cells holds great promise for overcoming therapy resistance and preventing tumor relapse. Throughout this review, we have highlighted several core themes essential to understanding and therapeutically exploiting DTP cells: 1) the critical role of epigenetic modifications, such as chromatin remodeling, in governing reversible drug tolerance; 2) the significance of transcriptional plasticity and adaptive metabolic reprogramming enabling DTP survival; 3) the influence of tumor microenvironmental interactions, notably CAF-derived HGF-mediated MET signaling, that sustain the reversible persister state; and 4) emerging therapeutic strategies including epigenetic inhibitors, metabolic disruptors, intermittent dosing approaches, and microenvironmental targeting. Addressing current controversies—such as the definition and cellular origins of DTP cells—and bridging existing knowledge gaps through advanced preclinical models and biomarker-driven clinical trials are pivotal steps forward. Collectively, these insights and approaches provide a comprehensive framework to develop innovative, clinically relevant strategies aimed at eliminating DTP-mediated recurrence, ultimately enhancing treatment durability and improving patient outcomes.
Moving forward, clinical translation will require strategic integration of combination therapies and adaptive dosing approaches, carefully guided by precise biomarker-driven patient stratification and real-time monitoring. Future clinical trials must emphasize flexible designs and longitudinal tumor analyses to validate interventions targeting DTP reversibility. Ultimately, this integrative approach offers the potential to substantially enhance treatment durability and improve patient outcomes in the face of persistent therapeutic challenges. Encouragingly, several early-phase clinical trials have begun exploring therapeutic strategies aimed at eliminating or exploiting DTP cells. For example, ongoing trials are assessing the efficacy of epigenetic modulators (e.g., HDAC inhibitors), metabolic disruptors (e.g., oxidative phosphorylation inhibitors), and intermittent dosing regimens specifically designed to target persister cell populations (ClinicalTrials.gov identifiers: NCT04566133, NCT05321368). Although these studies are still at preliminary stages, their results may provide critical insights and validation for clinically actionable strategies against drug-tolerant persistence in cancer.
Statements
Author contributions
HL: Writing – review and editing, Writing – original draft. WX: Writing – original draft. WC: Writing – original draft. GY: Data curation, Writing – review and editing. DT: Writing – review and editing, Writing – original draft.
Funding
The author(s) declare that no financial support was received for the research and/or publication of this article.
Conflict of interest
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Summary
Keywords
drug-tolerant persister (DTP) cells, reversible drug resistance, epigenetic and metabolic reprogramming, tumor microenvironment (TME), therapeutic intervention strategies
Citation
Li H, Xu W, Cheng W, Yu G and Tang D (2025) Drug-tolerant persister cell in cancer: reversibility, microenvironmental interplay, and therapeutic strategies. Front. Pharmacol. 16:1612089. doi: 10.3389/fphar.2025.1612089
Received
15 April 2025
Accepted
21 July 2025
Published
14 August 2025
Volume
16 - 2025
Edited by
Zhi Tian, University of South Florida, United States
Reviewed by
Zhe-Sheng Chen, St. John’s University, United States
Ameneh Ahrari, University of South Florida, United States
David Raj Chellappan, University of South Florida, United States
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Copyright
© 2025 Li, Xu, Cheng, Yu and Tang.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Guanxiao Yu, ygxqingdao@126.com; Dongmei Tang, dongmeiiou@163.com
† These authors have contributed equally to this work
Disclaimer
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