- 1Department of Tuberculosis, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, Henan, China
- 2Tuberculosis Clinical Research Center of Henan Province, Zhengzhou, Henan, China
- 3Children`s Hospital Affiliated to Zhengzhou University, Henan Key Laboratory of Pediatric Genetics and Metabolic Diseases, Zhengzhou, Henan, China
- 4Institute for Systems Biology, School of Life Sciences, Jianghan University, Wuhan, Hubei, China
Tuberculosis (TB) remains a major global health threat, with the urgent need for rapid and accurate diagnostic methods to improve control and treatment outcomes. This study evaluates the performance of MassARRAY technology for detecting Mycobacterium tuberculosis (MTB) and identifying drug resistance, compared to traditional culture methods and Xpert MTB/RIF. From July 2021 to February 2024, bronchoalveolar lavage fluid (BALF) samples from 289 suspected pulmonary tuberculosis patients at Henan Provincial Chest Hospital, China, were tested using MassARRAY, Xpert MTB/RIF, and conventional culturing techniques. The performance of each method was assessed for MTB detection, and the ability of MassARRAY to identify drug resistance was compared with standard drug susceptibility testing (DST). MassARRAY demonstrated a sensitivity of 96.5% and a specificity of 34.6% for MTB detection, outperforming the Xpert MTB/RIF assay in sensitivity (94.7%) but showing lower specificity. In detecting rifampicin resistance, MassARRAY achieved concordance rates of 83.93% with Xpert MTB/RIF and 72.73% with DST. Furthermore, MassARRAY successfully identified key genetic mutations associated with drug resistance, such as rpoB 531 for rifampicin and katG 315 for isoniazid. MassARRAY demonstrated high concordance with DST for several drugs, including isoniazid, kanamycin, and streptomycin, but exhibited limitations in detecting resistance to pyrazinamide, clofazimine, cycloserine, and linezolid. Overall, MassARRAY provides a rapid, cost-effective, and high-throughput diagnostic platform for MTB and drug resistance, particularly for first-line anti-tuberculosis drugs. While limitations in specificity and resistance detection for certain second-line drugs exist, its ability to rapidly provide comprehensive resistance profiles makes it a valuable tool for TB management.
1 Introduction
Tuberculosis (TB) is a chronic infectious disease caused by M. tuberculosis which remains one of the leading causes of morbidity and mortality, representing a major threat to global health. Tuberculosis was the second deadliest infectious disease in worldwide 2022, following COVID-19. According to World Health Organization report around ten million individuals get affected by tuberculosis every year and nearly one and half million of them resulting in fatalities (WHO, 2023a). In addition to human-to-human transmission, tuberculosis can also be zoonotic in nature, primarily caused by Mycobacterium bovis, particularly from dairy animals (Aljohani, 2023). Treatment for TB typically involves the use of multiple antibiotics combined over several months or years. The recent appearance of multidrug-resistant TB (MDR-TB) and extensively drug-resistant TB (XDR-TB), has complicated treatment, diminished cure rates, increased cost of management significantly (Dheda et al., 2017). Hence, the early and accurate diagnosis of M. tuberculosis and drug resistance phenotypes is important for both epidemic control and improving cure rates.
The diagnosis of M. tuberculosis is currently based on a combination of microbiological methods, molecular biological tests and imaging examination. One of these is the gold standard, traditional culture approach, though reliable, is time-consuming, often delaying treatment initiation. Smear microscopy is the other, although it provides data more quickly, it is less sensitive (Dong et al., 2022). With results in as little as two hours, Xpert MTB/RIF, the most used molecular diagnostic technique, is a fluorescent semi-nested real-time PCR for detecting M. tuberculosis and rifampicin resistance. However, this method was limited to detecting rifampicin resistance and does not provide comprehensive drug resistance profiles (Irfan and Bisht, 2022). While there are many uses for digital PCR technology in the detection of M. tuberculosis, issues related to its high cost, complexity and extended detection periods remain unresolved (Vogelstein and Kinzler, 1999; Devonshire et al., 2015). To address these issues, MassARRAY technology employs matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) to offer a rapid means of pathogen identification and the detection of drug-resistant gene. When compared to traditional testing techniques, MassARRAY offers several significant advantages: higher output volume, enhanced sensitivity, faster processing speed, and greater cost-effectiveness (Yoon and Jeong, 2021; Yang et al., 2023).
Several studies have confirmed the effectiveness of MassARRAY technology in the diagnosis of M. tuberculosis. For example, Wang et al. investigated the application of MALDI-TOF MS in the rapid diagnosis of pulmonary tuberculosis and detection of drug resistance. Their results showed that the sensitivity and specificity of this technique for MTB detection were 92.2% and 74.1%, respectively, exceeding traditional culture methods (Wang et al., 2023). Li et al. further optimized the analysis process of MALDI-TOF MS, validating its high sensitivity (96.91%) and specificity (100%) in the identification of M. tuberculosis (Li et al., 2022). In addition to diagnosing M. tuberculosis, MALDI-TOF MS has also been applied in detecting drug resistance. Wu et al. evaluated its performance in predicting M. tuberculosis drug resistance, showing that its sensitivity for detecting rifampicin and isoniazid resistance was 92.2% and 90.9%, respectively, showing strong consistency with phenotypic drug susceptibility testing (DST) (Wu et al., 2022). Shi and colleagues investigated the use of MassARRAY in retreatment patients, discovering that MALDI-TOF MS was highly consistent with the BACTEC 960 liquid culture method in detecting resistance to various anti-tuberculosis drugs (Shi et al., 2022). Furthermore, MALDI-TOF MS can also be applied to the detection of other pathogens. Yao et al. evaluated its use in detecting non-tuberculous mycobacteria (NTM), showing that the sensitivity and specificity for NTM detection were 77.8% and 92.5%, respectively (Yao et al., 2023). Although previous research had shown that MassARRAY technology has considerable advantages in the detection of M. tuberculosis and their drug resistance, there are several limitations to these investigations. Some studies were restricted by small samples size, reducing the generalizability of results. Some were focused on resistance testing for a particular treatment and did not fully cover the spectrum of anti-tuberculosis drugs, and some procedures had specific flaws that could contribute to false positive results (Wang et al., 2023; Gao et al., 2024; Liang et al., 2024).
The purpose of this study is to evaluate the potential of MassARRAY technology in drug resistance analysis and rapid tuberculosis diagnosis. It will also compare it to conventional cultivation methods and the commonly used Xpert MTB/RIF analysis. Initially, the study will evaluate MassARRAY’s sensitivity and specificity in detecting M. tuberculosis in the clinical sample. The study will then evaluate MassARRAY’s efficacy in detecting drug resistance in M. tuberculosis, including resistance to rifampicin, isoniazid, ethambutol, and other relevant medications. By fulfilling these goals, the research hopes to offer new technical assistance for the improvement of TB control tactics as well as scientific proof for the rapid diagnosis of tuberculosis.
2 Methods
2.1 Ethical declaration
This study was approved by the Ethics Committee of Henan Provincial Chest Hospital (Ethics Review Approval Number: 2024-05-11), and all participants signed an informed consent form.
2.2 Participant recruitment
Samples of bronchoalveolar lavage fluid (BALF) from 289 patients suspected of pulmonary tuberculosis, who visited Henan Provincial Chest Hospital from July 2021 to February 2024, were chosen for the study (Supplementary Table S1). Of the 289 patients included, 54.3% were male, and 45.7% were female, with a mean age of 46.7 years (range: 18–76 years). Inclusion criteria included: (1) Aged 18 years and older; (2) Clinical suspicion of tuberculosis, diagnosis according to WHO guidelines (WHO, 2020); (3) Informed consent obtained. Exclusion criteria: (1) Below 18 years of age; (2) Serious impairment of cardiac, hepatic, or renal function; (3) Pregnant or lactating women; (4) Refusal to participate in the study.
2.3 Culture of Mycobacterium tuberculosis
The processed bronchoalveolar lavage fluid (BALF) samples were inoculated into the MGIT 960 culture system (BD Diagnostic Systems, NJ, USA) and incubated in a constant temperature incubator at 37°C (Hanna et al., 1999). All isolated M. tuberculosis strains were confirmed through growth tests on para-nitrobenzoic acid (PNB) media and the MBP 64 antigen detection kit (Abe et al., 1999).
2.4 Xpert MTB/RIF assay
Processed bronchoalveolar lavage fluid (BALF) specimens were analyzed with the Xpert MTB/RIF testing system (Cepheid Inc., Sunnyvale, CA, USA) (Mechal et al., 2019). In brief, the centrifuged BALF samples were thoroughly mixed with 2mL of sample reagent and incubated at room temperature for 15 minutes. Subsequently, the mixture was transferred to an Xpert MTB/RIF cartridge for automated analysis in the GeneXpert system. This system automates the extraction, amplification, and detection of nucleic acids, providing results within 2 hours.
2.5 MassARRAY testing
The identification of M. tuberculosis was conducted using MALDI-TOF-MS technology in this study (Li et al., 2022). In brief, sample DNA was first extracted using the MagPure DNA Kit, followed by multiplex PCR amplification for the detection of M. tuberculosis and its drug-resistant genes. Specific target genes and sites are detailed in Table 1. The PCR reaction system included 10×PCR buffer, MgCl2, UNG, dUTP/dNTP Mix, PCR enzyme, and DNA template. The reaction conditions included pre-denaturation at 25°C for 5 minutes, initial denaturation at 95°C for 2 minutes, followed by 45 cycles (denaturation at 95°C for 30 seconds, annealing at 56°C for 30 seconds, extension at 72°C for 60 seconds), and a final extension at 72°C for 5 minutes. The amplification products were processed with SAP mix (containing SAP buffer and SAP enzyme) before the extension reaction, which involved iPLEX buffer plus, iPLEX termination mix, iPLEX pro enzyme, and iPLEX plus extend primer mix, with reaction conditions including denaturation at 95°C for 30 seconds, followed by 40 cycles (denaturation at 94°C for 5 seconds, annealing at 52°C for 5 seconds, extension at 80°C for 5 seconds), and a final 3-minute extension at 72°C. The reaction products were desalted automatically using the MASSARRAY® instrument, then subjected to mass spectrometry analysis with the MassARRAY® Typer, followed by analysis through a bioinformatics workflow based on Python 3. Sample positivity was assessed by calculating the extension rate of measurement sites, with values exceeding the set threshold considered positive.
2.6 Drug susceptibility testing
Drug susceptibility testing (DST) was conducted using the MicroDST™ assay kit (Sun et al., 2023). Critical concentrations for rifampin, isoniazid, ethambutol, amikacin, capreomycin, para-aminosalicylic acid, moxifloxacin, streptomycin, ofloxacin, and prothionamide were set at 1.0 μg/mL, 0.2 μg/mL, 5.0 μg/mL, 1.0 μg/mL, 2.0 mg/mL, 2.0 mg/mL, 0.5 μg/mL, 2.0 μg/mL, 2.0 μg/mL, and 2.5 mg/mL, respectively. Phenotypic susceptibility testing for pyrazinamide was conducted on Middlebrook 7H10 agar, with a critical concentration established at 100.0 μg/mL. After extraction and adjustment to specified concentrations, strains cultured in liquid media were inoculated onto both drug-containing and drug-free control media and incubated at 36°C ± 1°C for 14 days. Strain sensitivity to each drug was assessed by comparing colony growth on drug-containing media and drug-free control media (Baso, Zhuhai, China).
2.7 Statistical analysis
Sensitivity was calculated as the proportion of true positive cases among all cases with the disease (true positives/[true positives + false negatives]). Specificity was calculated as the proportion of true negative cases among all cases without the disease (true negatives/[true negatives + false positives]). Positive Predictive Value (PPV) reflects the proportion of true positive cases among all positive test results (true positives/[true positives + false positives]). Negative Predictive Value (NPV) reflects the proportion of true negative cases among all negative test results (true negatives/[true negatives + false negatives]). Concordance between different detection assays was calculated as the number of overlapping positive results between two methods, divided by the total number of positive cases detected by the reference method.
3 Results
3.1 Comparative analysis of M. tuberculosis identification methods
To evaluate the effectiveness of the MassARRAY method in identifying M. tuberculosis, we compared it with the Xpert and culture methods. The study included 289 tuberculosis suspects from Henan Provincial Chest Hospital (Figure 1). We used the culture results as the gold standard for M.tuberculosis positivity. A total of 240 samples were processed by culture testing, of which 85 were positive for M. tuberculosis (Figure 2A). Compared to this gold standard, the sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) of the MassARRAY method were 96.5% (95% CI: 90.1–98.8), 34.6% (95% CI: 27.0–43.0), 45.5% (95% CI: 41.1–56.0), and 95% (95% CI: 83.5–97.9), respectively. Meanwhile, the sensitivity, specificity, PPV, and NPV of the Xpert method were 94.7% (95% CI: 87.1–97.9), 47.4% (95% CI: 38.6–56.4), 50.7% (95% CI: 45.3–62.1), and 94.4% (95% CI: 83.8–97.3), respectively (Figure 2B). Furthermore, the Venn diagram demonstrated the overlap of positive samples identified by the three methods, of which 69 cases were detected as positive by all methods (Figure 2C; Supplementary Table S2). Overall, MassARRAY demonstrates high sensitivity and strong diagnostic performance in the identification of M. tuberculosis.

Figure 2. Comparative analysis of M. tuberculosis identification methods. (A) Comparative performance of MassARRAY, Xpert, and culture methods for M. tuberculosis identification. (B) Comparison of Sensitivity, Specificity, PPV, and NPV among MassARRAY, Xpert, and culture methods. (C) Venn diagram illustrating the overlap of M. tuberculosis-positive samples identified by MassARRAY, Xpert, and culture methods.
3.2 Comparative analysis of Rifampicin resistance detection by the MassARRAY
In order to explore the effect of the MassARRAY method on the detection of M. tuberculosis resistance to rifampicin, we compared it with the Xpert method and the drug sensitivity test (DST). The diagnostic criterion for rifampicin resistance was set as resistance detected by any one of the methods (MassARRAY, Xpert, or DST). Under this criterion, a total of 92 rifampicin resistance cases were identified, with MassARRAY, Xpert, and DST detecting 74, 56, and 44 cases, respectively (Figure 3A). In comparison with Xpert, the concordance of MassARRAY in detecting rifampicin resistance was 83.93% (47/56), and with DST, it was 72.73% (32/44). The Venn diagram shows that 25 cases of resistance were identified by all three methods (Figure 3B). Additionally, MassARRAY can also analyze the location of mutations in resistant genes. The highest mutation rate was observed at rpoB 531 (52.7%), followed by rpoB 533 (14.9%) and rpoB 526 (13.5%). Three cases were also found with mutations at two sites simultaneously (Figure 3C). Overall, MassARRAY has not only high sensitivity but also good specificity in the detection of rifampicin resistance in M. tuberculosis.

Figure 3. Comparative analysis of Rifampicin resistance detection methods. (A) Comparative performance of MassARRAY, Xpert, and Drug Susceptibility Testing (DST) methods for rifampicin resistance detection. (B) Venn diagram illustrating the overlap of rifampicin-resistant samples identified by MassARRAY, Xpert, and DST methods. (C) Distribution of rifampicin resistance mutation sites identified by the MassARRAY.
3.3 Effectiveness of MassARRAY method in detecting drug resistance of M. tuberculosis
In addition to examining rifampicin, we also evaluated the efficacy of the MassARRAY technique in identifying drug resistance in M. tuberculosis towards alternative medications. We evaluated the efficacy of the MassARRAY approach with drug susceptibility testing (DST) in identifying drug resistance of M. tuberculosis to other medicines in 92 cases that were submitted to DST. The effectiveness of these two approaches in determining M. tuberculosis resistance to different anti-tuberculosis medications (such as isoniazid, pyrazinamide, ethambutol, amikacin, kanamycin, etc.) is depicted in the Venn diagram (Figures 4A–J). When it came to identifying M. tuberculosis resistance to isoniazid, kanamycin, streptomycin, and protionamide, the MassARRAY approach demonstrated strong concordance when compared to DST, with percentages of 85%, 54.5%, 66.7%, and 80%, respectively. However, concordance was lower, at 9.1%, 22.2%, and 11.1%, for detecting M. tuberculosis resistance to pyrazinamide, capreomycin, and p-aminosalicylic acid, respectively (Figure 4K). Additionally, DST found that, of the 92 patients, there were 7, 3, and 2 cases of M. tuberculosis resistance to linezolid, cycloserine, and clofazimine, respectively, whereas the MassARRAY approach was unable to identify resistance to any of these three medications (Supplementary Table S1). According to our findings, the MassARRAY approach discloses flaws in some anti-tuberculosis medications while demonstrating excellent accuracy and dependability in others.

Figure 4. Comparative analysis of drug resistance detection methods. (A-J) Comparative performance of MassARRAY and Drug Susceptibility Testing (DST) methods for detection of resistance to various drugs: (A) Isoniazid, (B) Pyrazinamide, (C) Ethambutol, (D) Amikacin, (E) Kanamycin, (F) Capreomycin, (G) p-aminosalicylic acid, (H) Fluoroquinolones, (I) Streptomycin, (J) Protionamide. (K) Concordance analysis between MassARRAY and DST methods for detection of drug resistance in M. tuberculosis.
3.4 Analysis of drug resistance genomic loci in M. tuberculosis detected by MassARRAY technology
Utilizing 289 patient samples that underwent MassARRAY analysis, we analyzed the distribution of drug-resistant genetic mutation sites in M. tuberculosis and performed a comprehensive analysis. From the 289 patient samples that underwent MassARRAY analysis, resistance to isoniazid, ethambutol, fluoroquinolones, streptomycin, and amikacin was detected in 85, 22, 28, 45, and 24 cases, respectively (Supplementary Table S1). Notably, the mutation at locus katG315 was the most common among isoniazid-resistant variants, making up 81.1% of the total (Figure 5A). The most frequent mutation among ethambutol-resistant strains was found at locus embB306, accounting for 72.7% of the total alterations (Figure 5B). The most common mutation loci for resistance to amikacin, streptomycin, and fluoroquinolones were rrs1484, rpsL43, and gyrA94, respectively (Figures 5C–E). These findings underline the immense potential of MassARRAY even further. These results further highlight the significant potential of MassARRAY technology in identifying critical genetic loci associated with drug resistance in M. tuberculosis.

Figure 5. Distribution of Resistance Genomic Loci Detected by MassARRAY. Distribution of resistance genomic loci detected by MassARRAY for various drugs: (A) Isoniazid, (B) Ethambutol, (C) Amikacin, (D) Fleoroquinolones, (E) Streptomycin.
4 Discussion
The effectiveness of MassARRAY in identifying M. tuberculosis and detecting its drug resistance was evaluated in this study. Our findings show that both MassARRAY and Xpert exhibit high sensitivity (Figure 2B), confirming their effectiveness as diagnostic tools for detecting true positive cases of MTB. Additionally, the high negative predictive values (NPV) suggest that these methods are reliable in excluding MTB infection in patients when results are negative. These results align with previous studies (Akyar et al., 2018; Zhao et al., 2021; Wang et al., 2023), supporting the robustness of the methods. The key advantage of MassARRAY stems from the integration of MALDI-TOF MS with multiplex PCR amplification, which facilitates high-throughput, rapid, and precise detection of specific MTB nucleic acid sequences (Robinne et al., 2022).
However, the specificities of both MassARRAY and Xpert are relatively low (Figure 2B). This may be due to several factors, first, false positives might arise from contamination during sample preparation or cross-reactivity with non-tuberculous mycobacteria (NTM). Second, the use of culture as the gold standard has limitations, particularly in patients with low bacterial loads or prior antibiotic exposure, which may underestimate true MTB positivity. Notably, many patients in our study were referred to our hospital after receiving initial treatment at smaller local hospitals, where they commonly received antibiotics, including fluoroquinolones and other anti-tuberculosis drugs. These treatments likely reduced their bacterial load, making it more difficult to culture M. tuberculosis from their samples. To mitigate these issues, we implemented strict laboratory protocols, including separate handling of samples for different diagnostic methods. Additionally, MassARRAY incorporates propidium monoazide (PMA), which binds to DNA in non-viable cells and prevents its amplification during PCR, thereby reducing false positives from contamination or non-viable bacteria (TruChado et al., 2016).
We also investigated the application of MassARRAY in detecting drug resistance in MTB. The findings demonstrate that MassARRAY has a high level of accuracy in identifying resistance to anti-tuberculosis medications. Specifically, the resistance rates for rifampicin, isoniazid, and streptomycin were 34.3%, 39.4%, and 22.2%, respectively, among the 216 MTB-positive cases detected by MassARRAY. In comparison, resistance rates for these drugs were 40.0%, 41.2%, and 37.6% among the 85 MTB-positive cases detected through culture. Xpert detected rifampicin resistance in 35.9% of the 156 MTB-positive cases (Supplementary Table S1). This result aligns with the study by Liang et al., which showed that MassARRAY is as sensitive and specific as Xpert MTB/RIF at identifying rifampicin resistance (Liang et al., 2024). Additionally, our findings were compared to a 2021 epidemiological study that analyzed drug resistance in Henan Province across 30 counties. This study reported the highest resistance rates among retreatment patients for streptomycin (23.5%), isoniazid (25.14%), rifampicin (19.67%), ofloxacin (14.75%), ethambutol (14.21%), moxifloxacin (12.02%), levofloxacin (10.93%), kanamycin (2.73%), and amikacin (2.73%) (Zhu Yankun et al., 2024). Both our study and the epidemiological report highlight rifampicin, isoniazid, and streptomycin as having the highest resistance rates, suggesting that these are the predominant resistant strains circulating in Henan Province.
We identified several key genetic loci associated with drug resistance, such as katG315 for isoniazid and rpoB531 for rifampicin, which has significant clinical implications. These loci enable the development of personalized treatment regimens by predicting resistance patterns and guiding the selection of effective drug combinations. For example, detecting katG315 mutations may prompt clinicians to avoid isoniazid in favor of alternative drugs, thereby improving treatment efficacy. Furthermore, analysis of co-occurring mutations, such as rpoB 531 with katG 315, could provide insights into multi-drug resistance patterns, which are critical for optimizing treatment strategies in MDR-TB cases. Future studies should explore these patterns to enhance the clinical relevance of molecular diagnostics, thereby highlighting the potential of incorporating MassARRAY into routine clinical workflows to advance precision medicine for TB management. However, our results also underscored the limitations of MassARRAY in detecting resistance to linezolid, cycloserine, and clofazimine, which could stem from unknown or less characterized resistance loci not currently covered by the assay (Oviaño and Bou, 2018). Future studies should focus on identifying new resistance loci for second-line drugs, such as pyrazinamide and clofazimine, and incorporating these loci into the MassARRAY platform to expand its detection capabilities. Ongoing research, including efforts aligned with the WHO’s 2023 ‘Catalog of Mutations Associated with Drug Resistance in Mycobacterium tuberculosis (WHO, 2023b),’ could further enhance the assay’s ability to detect resistance to emerging anti-tuberculosis drugs, thereby broadening its clinical utility.
For the purpose of directing precise clinical pharmaceutical use, improving treatment success rates, and lowering the risk of disease transmission, rapid and reliable drug resistance testing is essential (Huang et al., 2013; Martinez et al., 2014). Quick access to comprehensive resistance data is provided by MassARRAY, which helps physicians develop individualized treatment plans that improve patient outcomes and slow the spread of resistant strains (Ioerger et al., 2009; Van Belkum and Dunne, 2013). Despite the robust findings, the sample size (289 cases) limits the generalizability of the results. A larger sample size would enhance the precision of these estimates and improve the statistical power of comparisons between methods. To validate the broader applicability of MassARRAY, future studies will include multicenter trials across diverse geographical regions, including low-resource settings with higher prevalence of MDR-TB and XDR-TB. These trials will evaluate the platform’s performance in various demographic and clinical contexts, ensuring generalizability and scalability. Additionally, the cost-effectiveness of MassARRAY will be assessed in such settings to establish its feasibility for large-scale implementation. Further studies could improve the precision and reliability of the MassARRAY by expanding the sample size, conducting multicenter collaborations, refining the testing processes, and developing new sites for resistance detection (Mugenyi et al., 2024), this would help verify its clinical value in tuberculosis across various populations.
In conclusion, this study show that MassARRAY has the potential to be a quick, precise, high-throughput technique for identifying M. tuberculosis and detecting drug resistance to several first- and second-line anti-tuberculosis medications. MassARRAY could significantly enhance TB diagnostic and management techniques, especially in resource-limited settings. However, further studies are needed to confirm its efficacy in various populations and environments and investigate its potential for identifying medication resistance to newer anti-tuberculosis drugs. Addressing these research gaps will enable the full utilization of MassARRAY in the global fight against tuberculosis and ultimately improve patient outcomes.
Data availability statement
The original contributions presented in the study are included in the article/Supplementary Material. Further inquiries can be directed to the corresponding authors.
Ethics statement
The studies involving humans were approved by the Ethics Committee of Henan Provincial Chest Hospital. The studies were conducted in accordance with the local legislation and institutional requirements. The participants provided their written informed consent to participate in this study. Written informed consent was obtained from the individual(s) for the publication of any potentially identifiable images or data included in this article.
Author contributions
SW: Conceptualization, Data curation, Funding acquisition, Investigation, Validation, Writing – original draft. LG: Formal analysis, Investigation, Methodology, Validation, Writing – original draft. SZ: Investigation, Methodology, Writing – original draft. XM: Funding acquisition, Methodology, Writing – original draft. RL: Project administration, Resources, Supervision, Writing – original draft. BZ: Conceptualization, Funding acquisition, Visualization, Writing – review & editing.
Funding
The author(s) declare that financial support was received for the research and/or publication of this article. This work was supported by Henan Provincial Science and Technology Program in 2023 (242102310083), The Research Fund of Jianghan University (2024JCYJ06), Hubei Province Natural Science Foundation (2025AFB113) and Henan Provincial Natural Science Foundation (222300420351).
Acknowledgments
We would like to thank all research staff involved in this study and all participants.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
The handling editor JS declared a shared affiliation with the authors XM at the time of review.
The reviewer LA declared a shared affiliation with the authors XM at the time of review.
Generative AI statement
The author(s) declare that no Generative AI was used in the creation of this manuscript.
Publisher’s note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
Supplementary material
The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fcimb.2025.1539240/full#supplementary-material
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Keywords: tuberculosis, Mycobacterium tuberculosis, MassARRAY, drug resistance, molecular diagnosis
Citation: Wu S, Ge L, Zheng S, Ma X, Liang R and Zhang B (2025) A comparative study using Xpert MTB/RIF and culture methods evaluates MassARRAY technology for rapid detection of Mycobacterium tuberculosis and drug resistance. Front. Cell. Infect. Microbiol. 15:1539240. doi: 10.3389/fcimb.2025.1539240
Received: 04 December 2024; Accepted: 18 June 2025;
Published: 09 July 2025.
Edited by:
Jian Shang, Zhengzhou University, ChinaReviewed by:
Hongxia Ma, Henan Centers for Disease Control and Prevention, ChinaLi Ang, First Affiliated Hospital of Zhengzhou University, China
Sultan Ali, University of Agriculture, Pakistan
Xiaowen Wang, Huazhong University of Science and Technology, Wuhan, China
Dr Rohan Samir Kumar Sachan, Lovely Professional University, India
Copyright © 2025 Wu, Ge, Zheng, Ma, Liang and Zhang. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Ruixia Liang, MTM5MzcxMzY1MzdAMTYzLmNvbQ==; Baolong Zhang, emhhbmdibEBqaHVuLmVkdS5jbg==