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6 articles

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Original Research

Published on 26 May 2025

CytoLNCpred-a computational method for predicting cytoplasm associated long non-coding RNAs in 15 cell-lines

in RNA Bioinformatics

Shubham Choudhury
Naman Kumar Mehta
Gajendra P. S. Raghava

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1585794

468 views

Brief Research Report

Published on 22 May 2025

MORE-RNAseq: a pipeline for quantifying retrotransposition-capable LINE1 expression based on RNA-seq data

in RNA Bioinformatics

Yutaka Nakachi
Jianbin Du
Risa Watanabe
Yutaro Yanagida
Miki Bundo
Kazuya Iwamoto

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1575346

612 views

Original Research

Published on 06 May 2025

Tumor tissue-of-origin classification using miRNA-mRNA-lncRNA interaction networks and machine learning methods

in RNA Bioinformatics

Ankita Lawarde
Masuma Khatun
Prakash Lingasamy
Andres Salumets
Vijayachitra Modhukur

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1571476

1,779 views

Data Report

Published on 10 Mar 2025

An extended miRNA repertoire in Rattus norvegicus

in RNA Bioinformatics

Julienne Lehmann
Ali Yazbeck
Jörg Hackermüller
Sebastian Canzler

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1545680

672 views

Original Research

Published on 14 Jan 2025

hsa-miR-548d-3p: a potential microRNA to target nucleocapsid and/or capsid genes in multiple members of the Flaviviridae family

in RNA Bioinformatics

H. W. Cayatineto
S. T. Hakim

Frontiers in Bioinformatics

doi 10.3389/fbinf.2024.1487292

1,222 views

Original Research

Published on 06 Jan 2025

In silico identification of chilli genome encoded MicroRNAs targeting the 16S rRNA and secA genes of “Candidatus phytoplasma trifolii”

in RNA Bioinformatics

Vineeta Pandey
Aarshi Srivastava
Ramwant Gupta
Haitham E. M. Zaki
Muhammad Shafiq Shahid
Rajarshi K. Gaur

Frontiers in Bioinformatics

doi 10.3389/fbinf.2024.1493712

1,297 views
1 citation