Abstract
A key challenge in urban biodiversity conservation is to understand the drivers that govern the population establishment of different groups of species in different urban ecosystems. Here, we ask whether and to what extent vascular plant species establishment (i.e., the ability to establish self-sustaining populations within a certain time span) is driven by interactions of species functional traits, native status, and the type of ecosystem species occur in, with types of ecosystems distinguished by their degree of ecosystem novelty. To answer this question, we use a dataset of 1,178 vascular plant species occurring in Berlin, Germany that originally had been compiled to substantiate the Berlin Red List of endangered plant species. This dataset classifies native and non-native species into casual and established species based on a minimum of 25 years of expert observation. Whether a species is established or casual is distinguished among four broad types of ecosystems: natural remnant, hybrid, novel immature, and novel mature ecosystems. Moreover, we classify species into those native to Berlin and non-native species (split into archaeophytes and neophytes), and link species to selected functional traits and indicator values. By applying ordinal regression within a Bayesian framework, we show that traits are key drivers of these establishment processes and that the traits that drive species establishment differ across types of ecosystems. While across traits, more established species are present in natural remnants, low canopy height, annual life span, and late end of flowering specifically promote establishment in novel immature ecosystems. In hybrid ecosystems, low canopy height and reproduction by seeds are beneficial traits, with the latter promoting establishment in novel mature ecosystems, too. Traits were less important in predicting species establishment in native as compared to non-native species. All types of ecosystems add to urban biodiversity, and trait analyses refine our knowledge on how they can be supported in doing so on the long term. This can help in sharpening conservation measures.
Introduction
Urban and urbanizing areas support both high biodiversity (e.g., ; ) and biodiversity loss (). This seeming discrepancy might in part be due to the lack of long-term studies of species population development in urban environments (but see ). Cities “potentially carry a large extinction debt” (, p. 1165). Therefore, by solely investigating today’s species occurrences, we cannot reliably foresee population development. Rather, today’s species richness might overestimate the real capacity of urban areas to host stable populations in the long-term. Key research questions for urban biodiversity conservation have thus been raised recently, such as whether urban ecosystems act as sources or sinks—or neither—of biological diversity (; ) or how urban environmental filters (; ; ) affect the establishment of viable populations within urban areas ().
Urban environments are characterized by a mosaic of different ecosystems (), many of which have been highly transformed by humans. More specifically, a range of so-called hybrid and novel ecosystems (, ) are present in urban areas (). defined these as ecosystems that differ from their historic state to an extent that they—in the case of hybrid ecosystems—combine mixtures of “old” and “new” ecosystem features or—in the case of novel ecosystems—are so deeply transformed that no return to the historic state is possible. The questions arise what the contribution of hybrid and novel ecosystems is to (urban) biodiversity and if these ecosystems offer similar opportunities for establishing sustainable populations as natural ecosystems do.
Similar to containing a range of novel ecosystems, urban environments harbor a high share of non-native species (; ). While the establishment of native species (especially rare or threatened ones) within ecosystems might be a process valued by society, the establishment of non-native (especially invasive) species is often judged as an unwanted process, specifically within natural ecosystems. Identifying drivers of species establishment of different groups of species in different kinds of urban ecosystems can thus help us to identify conservation and management priorities (; ). A previous study by revealed different habitat functions of remnant, hybrid, and novel ecosystems, and a considerable gap between the occurrence and population establishment of native, non-native, and endangered species in these ecosystems. Yet, the role of functional traits in governing whether species manage to establish or not remains unclear. Research on the functional traits of native vs. non-native species () and of endangered species in novel vs. hybrid and natural ecosystems (,) suggests that traits influence both species’ ability to establish and local extinction.
Traits shown to govern the occurrence of species differ between urban and non-urban areas (see for a review of vascular plants). A range of functional traits and other species attributes has been identified that promote plant life in urban areas such as large seed mass, large canopy height, short lifespan, dispersal by humans, or adaptation to warm, dry, alkaline, and nutrient rich conditions (; ; ). Moreover, functional flexibility in the sense of intraspecific trait variation might prove beneficial in urban environments (). Consequently, traits also play a role in determining extinction risk. In urban areas across the world, plant species’ extinction debt relates to selected functional traits, with low canopy height, light seeds, and affinity to forests or riparian ecosystems promoting extinction (). Similarly, in Berlin, Germany, showed that traits predict local extinction in target species of conservation concern. Still, as many urban biodiversity studies rely on spatial analysis, only representing snapshots in time (), extinction risk might well be masked by species’ life span (). Also, by looking at heterogeneous urban systems as if they were homogeneous entities, it is hard to gain a deeper understanding of urban biodiversity (; ), such as identifying mechanisms that drive extinction risk. Similarly, establishment failures will be masked by simply looking at the presence and absence of species at a certain point in time without considering urban heterogeneity ().
To overcome these shortages, introduced a framework for studying plant population establishment across different types of urban ecosystems. They categorized ecosystems within urban areas following a previous approach () into (i) natural remnant, (ii) hybrid, (iii) novel immature, and (iv) novel mature ecosystems. These categories can be paralleled with the novel ecosystem concept (, ) and relate to the “novelty of landscapes, ecosystems, and communities” according to , which is a site-specific perspective, defining novelty based on changes to a site (e.g., increasing the share of sealed surface in a site thus increasing temperature), not on whether environmental conditions in a site are new to a species (e.g., species occurring on urban sites characterized by high temperatures might be adapted to high temperatures anyway). The four different types of urban ecosystems comprise (i) relicts of ecosystems resembling historical benchmarks of natural landscapes such as deciduous forests or wetlands; (ii) ecosystems altered by humans that might still be able to return to historical conditions by natural succession, such as grazed grassland or forest plantings on natural soils; (iii, iv) novel ecosystems deeply altered by humans that are unlikely to return to historical conditions due to irreversible changes to soils or other environmental features as on urban vacant land. These novel ecosystems had been split in two subtypes to account for different levels of self-regulation: (iii) the first subtype is still subjected to recent or ongoing anthropogenic disturbance and thus being dominated by early successional stages with a low level of self-regulation; the second subtype (iv) has not been subjected to severe anthropogenic disturbance for more than about 20 years, leading to novel ecosystems mainly being governed by natural processes again such as in urban woodlands on vacant lots (). To establish populations within these ecosystems, species need to overcome a number of environmental filters: They need to disperse to patches of an ecosystem, survive in prevailing environmental conditions, and reproduce. Species that occur in an ecosystem but do not manage to reproduce, are so-called casual species, whose long-term occurrence is dependent on ongoing migration from other locations (such as plants cultivated in gardens as source of many spontaneously occurring non-native casual species). The framework allows testing hypotheses about potential drivers of species establishment such as species native status () or species functional traits ().
Here, we made use of a dataset comprising information about the population establishment of 1,178 vascular plant species across ecosystems of different novelty in Berlin, Germany. By applying the framework suggested by , we asked whether and to what extent species establishment is driven by interactions of species’ functional traits, native status, and the ecosystem species occur in—and thus ecosystem novelty. While showed that established species in natural remnant and novel mature ecosystems are mostly native but non-native species have a higher share among established species in hybrid and novel immature ecosystems, we hypothesized that—on top of that—both species characterized by functional flexibility and species characterized by traits promoting occurrence in urban areas will establish more often than other species, but the relevance of traits for species establishment will vary depending on ecosystem novelty and native status (see Table 1 for more detailed hypotheses).
TABLE 1
| Drivers | Hypothesis |
| Interaction: Type of ecosystem by native status | In hybrid and novel immature ecosystems, many established species will be characterized by being non-native, while in natural remnants and novel mature ecosystems, established species will mainly be native—as demonstrated by . |
| Interaction: Type of ecosystem by traits | While being well-adapted to urban environmental conditions, such as being annual or adapted to high temperature (; ; ), should promote establishment, this pattern will be especially pronounced in hybrid- and novel immature ecosystems but less pronounced in natural remnants and novel mature ecosystems [and vice versa for species with traits less well adapted to urban conditions such as being wind-dispersed (; )]. In addition, in more urban (i.e., hybrid and novel) ecosystems, many established species will be characterized by functional flexibility (e.g., species with indifferent response to temperature). |
| Interaction: Native status by traits | Traits that generally increase the frequency of occurrence of non-native species in comparison to native species (e.g., ; ) should characterize established non-native rather than native species. Traits without relations to non-native species occurrence will neither affect establishment. Established native species will often be characterized by functional flexibility but not so non-native species—in agreement with results by . |
Hypotheses about how interactions of species traits with different types of ecosystems (characterized by ecological novelty) and with species native status will influence the establishment of vascular plant species within an urban area.
Materials and Methods
Species Data
We used an existing dataset on the vascular flora of Berlin, Germany () that originally had been compiled to substantiate the regional Red List of Berlin (). This Red List includes all wild growing native and non-native species that are known to occur or once have occurred in the area of today’s Berlin. The endangerment assessment distinguishes between species at different categories of endangerment, following the IUCN Red List approach. For our analyses, we chose all species listed in the dataset in , independent of their category of endangerment.
As an innovation, the dataset in included information about the presence of species in four broad types of ecosystems that represent the total of Berlin’s ecosystems, and about species’ population status (i.e., established vs. casual) in each of the four ecosystem types, based on expert assessments. Berlin’s ecosystems were distinguished into four broad types that reflect how human agency modified ecosystems in a metropolitan region. The four ecosystem types being differentiated in the original study from 1991 can be roughly paralleled to the later established novel ecosystem concept by —as done in previous analyses (, see Supplementary Table 1). This allows us to discuss the results in relation to the novel ecosystem concept. The four ecosystem types are: Natural remnant (e.g., patches of alluvial forest), hybrid (e.g., dry grassland on natural soils), novel immature (e.g., herbaceous ruderal communities on vacant land), and novel mature (e.g., emerging urban forests sensu). This distinction was based on the origin of ecosystems (natural vs. anthropogenic) and on the prevalence of natural ecosystem processes (low, mean, high) as illustrated in Supplementary Table 1 (adapted from ). Natural processes (such as natural growth and mortality cycles) dominate in natural remnants and novel mature ecosystems, being medium for hybrid and low for novel immature ecosystems. Natural remnants are of natural origin, both types of novel ecosystems are of anthropogenic origin, while hybrid ecosystems can be of both, natural and anthropogenic origin.
Following a well-established approach in invasion ecology, native status differed between native species and non-native species. While the former are defined to have colonized a region by natural means, the latter are defined as being introduced accidentally or deliberately by humans. Non-native species are being divided into archaeophytes (introduced before 1500 AD) and neophytes (introduced after 1500 AD). Due to a long tradition in floristic research in Berlin (), information on native status, specified for the Berlin region, was available and included in the 1991 Red List () and in the original dataset ().
For every species, information on whether it is casual or established is available, per type of ecosystem. The concept of casual vs. established species refers to the degree of naturalization in invasion science () but was also applied here to native species because they must overcome dispersal and establishment filters when colonizing urban habitat patches, just as introduced species have to (). Based on expert judgment, species were classified as established in a given type of ecosystem if a minimum of two generations of spontaneous offspring had been observed within a period of ≥ 25 years (). All species that do not meet this criterion were included as casual species. Accordingly, a species can be casual in one, but established in another type of ecosystem. We used the distinction between “casual” and “established” as response variable (cf. section “Analysis”).
It has to be noted that all data from the original 1991 dataset refer to occurrence and establishment in the four ecosystem types, without geographic data on where in Berlin patches of the four types of ecosystems are located. Rather than on spatial patterns, we here focus on the long-term occurrence of species and its drivers.
In summary, the dataset we used here contains those 1,178 vascular plant species with information on established vs. casual occurrence within one or several of four types of ecosystems, together with species native status.
Functional Trait Data
Traits (Supplementary Table 2) were chosen in relation to four environmental filters that species need to pass in order to establish in urban ecosystems, which we call the dispersal, environmental, reproduction, and survival filter (). Trait-by-species data was taken from databases, namely BiolFlor (; ) and LEDA (; ). In addition to functional traits, Ellenberg values were chosen (), i.e., species attributes that describe the association of plant species to given environmental conditions. For simplicity, we call both functional traits and attributes “traits” from now on. Species that are able to express several states of a trait (e.g., reproducing both clonally and by seed or with indifferent response to environmental conditions) were treated as flexible state of a trait.
Not every trait was available for every species. Still, we did not impute data as the amount of missing values seemed acceptable (traits chosen all cover > 75% of species; Supplementary Table 2) and phylogenetic imputation was not an option as we included the phylogenetic relationships of plant species into our models.
Phylogenetic Data
We applied Daphne (, ), a dated phylogeny that covers the vascular flora of the British Isles, Germany, The Netherlands, and Switzerland, including 4,685 species in total. We pruned this phylogeny to our dataset of plant species (and to subsets of the dataset if single traits were analyzed; see below), by using packages “ape” () and “picante” () in R 3.6.1 (). Consequently, only species present in all, the list of species, trait databases, and Daphne were included into analyses.
Analysis
Our main aim was to explain species establishment (whether a species is casual or established) by interactions of functional traits with ecosystem novelty and species native status. Also, we aimed to account for the relatedness of species, because such autocorrelation can invert statistical pattern, as shown for spatial autocorrelation by . Our models thus comprise an ordinal response variable (casual/established, with casual = 0 and established = 1), a set of categorical, numerical, and/or integer fixed predictors (type of ecosystem, native status, traits), species identity as a random predictor, and a covariance matrix of species based on phylogenetic relationships (). Ordinal regression within a Bayesian framework allows to model such data. We applied function “brm” within R-package “brms” (, ), setting the family-argument to “Bernoulli”, choosing species identity as a grouping factor, and including a covariance matrix of our study species. We did so for several models:
First, we ran models that included one trait each, embedded in three two-way interactions as predictors of species establishment: type of ecosystem by native status, type of ecosystem by trait, native status by trait. This was done separately for each trait (“single trait models”), in order to identify traits that have an effect on species establishment, and to reduce the number of predictors in the full model (see below). Within single trait models, for categorical traits, we compared the most flexible trait value or trait combination to all other values. For example, species able to reproduce both clonally and by seeds seem more flexible than species reproducing by seeds only or clonally only, so the two latter were compared to the former. We ran all single trait models by applying one Markov chain and a minimum of 4,000 iterations (depending on the number of iterations needed for a model to converge). For continuous and integer traits, we applied both, models as described above and models containing t2-smooths, which internally choose the best fit, so that potential non-linearity in the combined effects of two interacting variables can be modeled (). We compared the outcome and LOO-adjusted R2 for the model with and the model without t2-smooths. Categorical traits that contained ≤ 5 species in a trait-ecosystem or trait-status combination (e.g., archaeophytes dispersing their seeds by wind) were excluded because models did not converge reliably. Also, if two closely related traits (such as beginning, duration, and end of flowering) showed similar effects on species establishment, only one of them was chosen for inclusion into the full model.
Second, in order to further reduce the number of predictors in the full model and to make sure that predictors are not too similar to each other, we tested for correlation among those traits that showed significant effects on species establishment in single trait models. Numeric traits were tested for correlation using Kendall’s rank correlation (after testing trait distribution for normality). Categorical and integer traits (the latter—Ellenberg values—sorting species into groups of 1–9 or 1–12, thus being pseudo-categorical) were tested for correlation using Principal Component Analysis.
Lastly, we included all traits chosen in the two steps above into one model with the interactions of type of ecosystem by native status, type of ecosystem by traits, and native status by traits as fixed predictors, and casual vs. established again as response variable (“full model”; see the list of species with all other variables included into the full model in Supplementary Table 3). Applying stepwise backward selection, we deleted non-significant predictors from the model, i.e., those where the two-sided 95%-credible interval contained zero. Backward selection was performed until no non-significant predictors were left.
This procedure enabled us to test whether different groups of species vary in being established or casual across the four types of ecosystems, and which traits are most relevant in determining these differences.
All calculations were performed in R 3.6.1 ().
Results
The original list of species contained 1,178 vascular plant species. Of these, 49 were excluded because they did not appear in functional trait databases, the Daphne phylogeny, or both. Among excluded species, there were many aggregates (e.g., Alchemilla vulgaris agg., Ranunculus auricomus agg., Rubus fruticosus agg.). Of the remaining 1,129 species, 715 occurred within natural remnant ecosystems, 741 within hybrid ecosystems, 527 within novel immature, and 576 within novel mature ecosystems. Note that a species can occur in up to four types of ecosystems, so numbers sum to > 1,129 (cf. Supplementary Figure 1 for intersections among the four types of ecosystems). 673 of the 1,129 species were native (59.61%), 148 archaeophytes (13.11%), and 308 neophytes (27.28%; cf. Table 2 for numbers of casual and established species per status group and type of ecosystem, and Supplementary Table 2 for numbers of species per level of a categorical trait). After linking the list of 1,129 species to trait data, missing trait-by-species values ranged from 0 for type of reproduction and life span to 24.18% for dispersal vector and Ellenberg values (Supplementary Table 2).
TABLE 2
| Native species | Archaeophytes | Neophytes | |||||||
| Casual | Established | Total | Casual | Established | Total | Casual | Established | Total | |
| Natural remnants | 58 | 513 | 571 | 26 | 15 | 41 | 42 | 61 | 103 |
| Hybrid ecosystems | 139 | 280 | 419 | 34 | 79 | 113 | 86 | 123 | 209 |
| Novel immature ecosystems | 103 | 95 | 198 | 43 | 74 | 117 | 150 | 62 | 212 |
| Novel mature ecosystems | 62 | 341 | 403 | 18 | 39 | 57 | 42 | 74 | 116 |
Casual, established, and total number of vascular plant species per status group (native, archaeophyte, neophyte) and type of ecosystem (natural remnant, hybrid, novel immature, novel mature) in the flora of Berlin, Germany.
Single Trait Models
Phylogenetic relationships always had a weak positive effect on the response variable, indicating that if a species is established, its close relatives tend to be established, too. The interaction of type of ecosystem and native status was always significant. Across all types of ecosystems, there were more established native than established non-native species but less established native species were present in hybrid and novel ecosystems than in natural remnants.
The traits maximum and minimum canopy height, end of flowering, life span, and type of reproduction did not interact with native status but with type of ecosystem. Overall, there were more low-growing than tall growing species among established species and this difference was more pronounced in hybrid and novel immature ecosystems as compared to natural remnants and novel mature ecosystems. As this applied to both minimum and maximum height, only maximum height was included into the full model. Further, there were more established species with an early than late end of flowering in natural remnants and novel mature ecosystems, while hybrid and novel immature ecosystems showed an opposite pattern. For life span, there were less perennial established species in hybrid and novel immature than in other ecosystems. Compared to species with multiple life span types, there were less biennial established species in all ecosystems but in novel immature ecosystems. For type of reproduction, there were more established species reproducing exclusively by seeds in hybrid and both types of novel ecosystems than in natural remnants when compared to flexible species. There was no difference between flexible species and species that exclusively reproduce clonally.
Ellenberg’s continentality did not interact with type of ecosystem but with native status: For archaeophytes, there were more continental species and species with medium response to continentality among established species, while for neophytes, more medium and oceanic species were present among established species. For native species, there were slightly more indifferent and continental species among established species.
Ellenberg values of light, nitrogen, reaction, and temperature interacted with both type of ecosystem and native status. Compared to indifferent species, there were more established species adapted to sunny or medium light, medium temperatures, and medium or high nutrient loads within novel immature ecosystems. In hybrid and novel mature ecosystems, species adapted to acid soils were less common among established species than in the other types of ecosystems when compared to pH-indifferent species. An indifferent response to soil pH characterized established species in most cases. For archaeo- and neophytes, species adapted to shady sites, to either high or low nutrient loads, and to medium temperatures were more common among established species than was the case for indifferent species. Patterns were opposite for native species. Among native established species, there were less species adapted to alkaline soils than pH-indifferent species but this pattern was less pronounced for the two groups of non-native species. Archaeophytes were the only group characterized by more established species with adaptation to neutral pH than pH-indifferent species.
Both the beginning and duration of flowering interacted with type of ecosystem and native status, but only in the models including t2-smooths. More species with a late start of flowering were present among established species in hybrid ecosystems, while the opposite was true for novel mature ecosystems. Less species with long flowering duration were present among established species in natural remnants and novel mature ecosystems but not in the two other types of ecosystems. Differences among native species, archaeo- and neophytes were weak and only present in the smoother-model with slightly less species with a late start of flowering present among established archaeophytes but an opposite pattern for established native species. Moreover, there were less species with long vs. short flowering duration among established neophytes. As patterns of end and duration of flowering were similar, only the former was included into the full model.
Seed mass interacted with both type of ecosystem and native status but only in the model including smooths. However, estimated errors in this model were very high compared to estimates. No smooth-model results are mentioned for any other continuous or integer trait as model results with and without smoothers were identical. Pollination vector interacted neither with type of ecosystem, nor with native status. Some combinations of dispersal type and Ellenberg value for moisture with type of ecosystem and native status contained ≤ 5 species. Consequently, traits principally suitable for inclusion into the full model were maximum canopy height, beginning and end of flowering, life span, and type of reproduction, Ellenberg values for continentality, light, nitrogen, reaction, and temperature.
Correlation Among Traits
Of the traits principally suitable for inclusion into the full model, all numerical traits were correlated with < 0.7, not providing any reason for exclusion from the full model (). For categorical and integer traits, principal component analysis showed that Ellenberg continentality, light and temperature, i.e., all climate-related attributes—were correlated, and Ellenberg nitrogen and reaction, i.e., both soil-related attributes—were correlated. Consequently, besides the numerical traits maximum canopy height, beginning and end of flowering, life span, and type of reproduction, Ellenberg temperature and Ellenberg nitrogen were included into the full model.
Full Model
Results of the starting full model (before applying stepwise backward selection) with and without smoothers were identical. The model without smoothers was chosen for backward selection. In the course of seven backward selection steps, the following traits were excluded (in the order given) because they had no significant effect: Ellenberg temperature with all its interactions, interaction of type of ecosystem by Ellenberg nitrogen, interaction of native status by maximum canopy height, interaction of native status by beginning of flowering, interaction of native status by type of reproduction, interaction of native status by end of flowering, and interaction of type of ecosystem by beginning of flowering. Thus, predictors with significant effects included in the final full model (Table 3) were the interactions of type of ecosystem by native status, life span (Figure 1A), type of reproduction (Figure 1B), flowering end (Figure 1C), and maximum canopy height (Figure 1D), the interactions of native status by life span (Figure 2A) and by Ellenberg nitrogen (Figure 2B), as well as species identity and phylogenetic relationships among species.
TABLE 3
| Predictor | Estimate | Estimate Error | Lower 95% CI | Upper 95% CI | |
| Species | 0.06 | 0.02 | 0.03 | 0.11 | |
| Intercept | 3.61 | 0.95 | 1.84 | 5.60 | |
| Type of ecosystem Natural remnants | Hybrid | −2.22 | 0.80 | −3.93 | −0.64 |
| Novel immature | −2.68 | 0.84 | −4.26 | −1.03 | |
| Novel mature | −2.33 | 0.85 | −4.08 | −0.74 | |
| Native status Native species | Archaeophytes | −4.43 | 0.88 | −6.23 | −2.81 |
| Neophytes | −3.86 | 0.69 | −5.24 | −2.49 | |
| Life span Multiple life span states | Annual | –1.15 | 0.70 | –2.53 | 0.15 |
| Biennial | −2.41 | 0.97 | −4.29 | −0.62 | |
| Perennial | –0.38 | 0.67 | –1.76 | 0.85 | |
| Type of reproduction Both by seeds and clonally | By seeds | −1.05 | 0.41 | −1.85 | −0.27 |
| Clonally | 0.13 | 0.81 | –1.40 | 1.72 | |
| End of flowering | –0.10 | 0.17 | –0.43 | 0.21 | |
| Maximum canopy height | 0.00 | 0.02 | –0.04 | 0.06 | |
| Ellenberg nitrogen Species indifferent to soil nitrogen content | High | –0.63 | 0.36 | –1.35 | 0.07 |
| Medium | –0.48 | 0.31 | –1.12 | 0.12 | |
| Low | −1.05 | 0.32 | −1.70 | −0.45 | |
| Type of ecosystem by native status Natural remnants/Native species | Hybrid/archaeophytes | 2.95 | 0.62 | 1.78 | 4.17 |
| Novel immature/archaeophytes | 2.53 | 0.66 | 1.23 | 3.87 | |
| Novel mature/archaeophytes | 2.10 | 0.71 | 0.86 | 3.50 | |
| Hybrid/neophytes | 1.92 | 0.42 | 1.07 | 2.76 | |
| Novel immature/neophytes | 1.61 | 0.48 | 0.71 | 2.63 | |
| Novel mature/neophytes | 0.92 | 0.46 | 0.04 | 1.84 | |
| Type of ecosystem by life span Natural remnants/Multiple life span states | Hybrid/annual | –0.20 | 0.73 | –1.56 | 1.31 |
| Novel immature/annual | 1.74 | 0.75 | 0.25 | 3.22 | |
| Novel mature/annual | 0.72 | 0.83 | –0.83 | 2.28 | |
| Hybrid/biennial | 1.66 | 1.11 | –0.48 | 4.05 | |
| Novel immature/biennial | 2.25 | 1.19 | –0.13 | 4.42 | |
| Novel mature/biennial | 1.58 | 1.19 | –0.67 | 3.88 | |
| Hybrid/perennial | 0.20 | 0.73 | –1.17 | 1.67 | |
| Novel immature/perennial | –0.43 | 0.75 | –1.96 | 0.95 | |
| Novel mature/perennial | 0.98 | 0.78 | –0.53 | 2.46 | |
| Type of ecosystem by type of reproduction Natural remnants/Both by seeds and clonally | Hybrid/by seeds | 1.04 | 0.49 | 0.11 | 2.01 |
| Novel immature/by seeds | 0.29 | 0.56 | –0.79 | 1.40 | |
| Novel mature/by seeds | 1.22 | 0.53 | 0.23 | 2.32 | |
| Hybrid/clonal | –0.88 | –0.93 | –2.78 | 0.94 | |
| Novel immature/clonal | –0.30 | 1.23 | –2.89 | 1.87 | |
| Novel mature/clonal | 1.68 | 1.48 | –0.82 | 4.82 | |
| Type of ecosystem by end of flowering Natural remnants | Hybrid | 0.12 | 0.19 | –0.23 | 0.50 |
| Novel immature | 0.49 | 0.23 | 0.04 | 0.93 | |
| Novel mature | 0.18 | 0.23 | –0.28 | 0.64 | |
| Type of ecosystem by maximum canopy height Natural remnants | Hybrid | −0.10 | 0.03 | −0.17 | −0.04 |
| Novel immature | −0.36 | 0.16 | −0.70 | −0.10 | |
| Novel mature | –0.02 | 0.04 | –0.09 | 0.05 | |
| Native status by life span Native species/Multiple life span states | Archaeophyte/annual | 0.21 | 0.59 | –0.97 | 1.33 |
| Neophyte/annual | –0.18 | 0.58 | –1.34 | 0.94 | |
| Archaeophyte/biennial | 3.19 | 1.57 | 0.47 | 6.60 | |
| Neophyte/biennial | 2.19 | 0.10 | 0.30 | 4.62 | |
| Archaeophyte/perennial | 0.53 | 0.68 | –0.79 | 1.88 | |
| Neophyte/perennial | 0.59 | 0.52 | –0.34 | 1.59 | |
| Native status by Ellenberg nitrogen Native species/Species indifferent to soil nitrogen content | Archaeophyte/high | 1.61 | 0.64 | 0.43 | 2.96 |
| Neophyte/high | 1.81 | 0.50 | 0.88 | 2.88 | |
| Archaeophyte/medium | 1.60 | 0.57 | 0.57 | 2.74 | |
| Neophyte/medium | 1.11 | 0.45 | 0.30 | 2.12 | |
| Archaeophyte/low | 2.61 | 0.77 | 1.10 | 4.11 | |
| Neophyte/low | 1.71 | 0.52 | 0.71 | 2.71 | |
Result of the final full model (as result of stepwise backward selection) explaining the establishment of vascular plant species across the city of Berlin, Germany with interactions of type of ecosystem by native status, type of ecosystem by traits, and native status by traits as fixed predictors, together with species identity as a random predictor and a covariance matrix of species based on phylogenetic relationships (summed as predictor “species”).
For categorical predictors, the level, which all other levels were compared to, is provided in italics below the name of each predictor. CI, credible interval. Significant results, i.e., where credibility intervals do not include zero, are displayed in bold. Rhat was always < 1.1, indicating that the model converged properly (not shown; cf. ).
FIGURE 1
FIGURE 2

Plots illustrating significant interactions of (A) life span and (B) Ellenberg nitrogen with native status in explaining the establishment of vascular plant species in Berlin, Germany. Results shown are based on the full model (cf. Table 3). Y-axes show casual vs. established species as an ordinal response variable and x-axes show the four types of ecosystems. Plots were created using function “conditional_effects.brmsfit” in R-package brms (
Similar to single trait models, the interaction of type of ecosystem and native status was significant, with less archaeo- and neophytes among established species in natural remnants than in all other ecosystems compared to native species. With respect to traits, patterns for maximum canopy height resembled those of the single model. Again, end of flowering did only interact with type of ecosystem, but in contrast to the single model, only in novel immature ecosystems were there more established species with late vs. early end of flowering. As in the single trait model, type of reproduction interacted with type of ecosystem only. However, in the full model, there were less species exclusively reproducing by seeds than species reproducing both clonally and by seeds among established species within natural remnants and novel immature ecosystems. Life span interacted with both type of ecosystem and native status in the full model but in contrast to the single model, there were no differences any longer for biennial and perennial species. Rather, in novel immature ecosystems, there were more established annual species than established species with multiple life span types, opposite to all other types of ecosystems. Also in contrast to the single model, Ellenberg nitrogen interacted with native status only, and for both archaeo- and neophytes, there were less established species characterized by indifferent response to soil nitrogen concentration, compared to all other groups, while this was not the case for native species.
Discussion
A key challenge in urban biodiversity conservation is to understand which and how drivers govern plant population establishment in different urban ecosystems (
In addition, our results show that the traits that drive plant species establishment differ across types of ecosystems. Some traits are especially beneficial in novel immature ecosystems, in line with our second hypothesis. Here, the increased establishment of annual in comparison to other species corresponds to frequent disturbance and mirrors the high frequency of annual species that has been found in urban areas globally (
Novel immature ecosystems tend to be overrepresented in sites strongly subjected to the urban heat island (such as vacant lots or industrial brownfields in dense urban areas). Moreover, due to their openness compared to novel mature ecosystems, they might experience both higher temperatures and higher fluctuation in temperatures. As a result, species with late end of flowering are promoted. Additionally, the high share of late-flowering species among non-native species in general introduces a bias (
Interestingly, exclusive reproduction by seeds was not the main trait characterizing species established in novel immature ecosystems, but flexibility (reproducing both by seeds and clonally) ranked higher. This partly fits patterns shown by
However, we did not find much support for our third hypothesis that traits, which have been found to generally increase the occurrence frequency of non-native species as compared to native species (
Our hypothesis that functional flexibility more strongly supports the establishment of native as compared to non-native plant species, as had been suggested by experimental work of
Our results confirm findings by
Publisher’s Note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
Statements
Data availability statement
The original contributions presented in the study are included in the article/Supplementary Material, further inquiries can be directed to the corresponding author.
Author contributions
IK and ML provided data on species per type of ecosystem together with background knowledge. SK analyzed the data and drafted the manuscript. All authors together interpreted data, conceived the study, and contributed to the writing and revisions of the manuscript.
Funding
SK was funded by the Helmholtz-Centre for Environmental Research—UFZ in the frame of Program-oriented Funding IV (2021–2027).
Acknowledgments
We thank Marina Golivets and Ingolf Kühn at the Helmholtz-Centre for Environmental Research—UFZ for methodological advice. We thank all those who created the dataset of 1,178 vascular plant species used here.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Supplementary material
The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fevo.2022.790340/full#supplementary-material
Supplementary Table 3List of vascular plant species occuring in Berlin, Germany with selected traits, the type of ecosystem species occur in within Berlin (natural remnant, hybrid, novel immature, and novel mature ecosystems), species native status (whether species are native or non-native to Berlin — the latter distinguishing among archaeophytes and neophytes), and whether species have established or casual occurrence in the four types of ecosystems (0 = casual occurrence, 1 = established occurrence). This list is underlying the full model described in this article.
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Summary
Keywords
alien plant species, Bayesian framework, biodiversity conservation, functional traits, novel ecosystems, population establishment, urban land use, urbanization
Citation
Knapp S, von der Lippe M and Kowarik I (2022) Interactions of Functional Traits With Native Status and Ecosystem Novelty Explain the Establishment of Plant Species Within Urban Ecosystems: Evidence From Berlin, Germany. Front. Ecol. Evol. 10:790340. doi: 10.3389/fevo.2022.790340
Received
06 October 2021
Accepted
13 April 2022
Published
16 May 2022
Volume
10 - 2022
Edited by
Federico Morelli, Czech University of Life Sciences Prague, Czechia
Reviewed by
Roderick Fensham, University of Queensland, Australia; Gabor L. Lovei, Aarhus University, Denmark
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*Correspondence: Sonja Knapp, sonja.knapp@ufz.de
This article was submitted to Urban Ecology, a section of the journal Frontiers in Ecology and Evolution
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All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.