Frontiers in Microbiology | Microbe and Virus Interactions with Plants

Methods

Published on 25 Sep 2025

Rhizosphere microbiomes of field-grown B. stricta exhibit minimal diel changes in microbial membership and protein synthesis potential

in Microbe and Virus Interactions with Plants

Alessandra Ceretto
Cynthia Weinig

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1609057

1,651 views

Original Research

Published on 25 Sep 2025

Identification, biological characteristics, and screening of control agents against root rot of Ardisia crenata Sims in China

in Microbe and Virus Interactions with Plants

Zhien Xiao
Tiantian Guo
Yuxin Liu
Yue Yuan
Shaotian Zhang
Lu Liu
Shiying He
Yanling Long
Fuqiang Yin
Ming Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1618299

2,589 views

Original Research

Published on 25 Sep 2025

Molecular identification and pathogenic impact of Pythium aphanidermatum on ginger (Zingiber officinale): insights into oxidative stress, antioxidant responses, and mycotoxin profiling

in Microbe and Virus Interactions with Plants

Mukesh Meena
Garima Yadav
Priyankaraj Sonigra
Tushar Mehta
Adhishree Nagda
Abhishek Sahoo
Prashant Swapnil

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1626700

3,042 views

Original Research

Published on 25 Sep 2025

Endophytic bacteria Priestia megaterium 170T-4 improves soybean salt tolerance through regulation of ion homeostasis and phytohormone signaling pathways

in Microbe and Virus Interactions with Plants

Shutian Hua
Ruiyao Liu
Zhe Li
Han Zheng
Yanfen Zheng
Youqiang Wang
Cheng-Sheng Zhang
Ziyan Wang
Mingguo Jiang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1676456

2,798 views

Editorial

Published on 24 Sep 2025

Editorial: Microbial stress mitigation and crop improvement using multiomics holistic approach

in Microbe and Virus Interactions with Plants

Renu S.
Prem Lal Kashyap
Khan Mohd. Sarim

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1682186

1,426 views

Original Research

Published on 23 Sep 2025

Engineering nitrogen-fixing microbiomes with waste-derived carbon sources: toward circular and resilient biofertilizer solution

in Microbe and Virus Interactions with Plants

Nicolás Rodríguez-Romero
Juan Carlos Clavijo-Salinas
Julien Wist
Carlos Fernando Gutierrez
Daniel Uribe-Velez
Elaine Holmes
Janeth Sanabria

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1676616

2,550 views

Original Research

Published on 23 Sep 2025

AMF promotes the structure and metabolic activity of rhizosphere soil microbial communities in areca/vanilla intercropping system under nitrogen-limited conditions

in Microbe and Virus Interactions with Plants

Huifa Zhuang
Zhuo Feng
Yunbin Hu
Ziwei Ning
Qingyun Zhao
Hui Wang
Yizhang Xing
Ang Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1657672

2,332 views

Review

Published on 22 Sep 2025

Microbial-mediated induced resistance: interactive effects for improving crop health

in Microbe and Virus Interactions with Plants

Ashwini M. Charpe
Balaji Aglave
Dilip K. Ghosh

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1660944

2,190 views
2 citations

Original Research

Published on 19 Sep 2025

Soil viruses drive carbon turnover during subtropical secondary forest succession

in Microbe and Virus Interactions with Plants

Xingyi Chen
Danting Yu
Yuting Yan
Chengyu Yuan
Jizheng He

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1633379

2,292 views
1 citation

Original Research

Published on 19 Sep 2025

Geographic variation in fungal diversity associated with leaf spot symptoms of Coffea arabica in Yunnan, China

in Microbe and Virus Interactions with Plants

Xingfei Fu
Haohao Yu
Yaqi Li
Guiping Li
Xiaofei Bi
Yanan Li
Faguang Hu
Wenjiang Dong

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1568029

3,190 views

Original Research

Published on 18 Sep 2025

Isolation and characterization of new antagonistic bacteria P10-7 and evaluation of its biocontrol potential against tomato gray mold

in Microbe and Virus Interactions with Plants

Denghui Chen
Dandan Yue
Guanjie Li
Zongyuan Zhang
Liuzhu Zhou
Hongguang Xu
Dehai Liu
Xueyan Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1668865

3,063 views

Original Research

Published on 18 Sep 2025

Multi-potent rhizobacteria enhance banana growth and reduce chemical fertilizer input

in Microbe and Virus Interactions with Plants

Jeberlin Prabina Bright
Kavitha Chinnasamy
Hemant S. Maheshwari
Kahkashan Perveen
Faheema Khan
Jayanthi Barasarathi
Balachander Dananjeyan
Nazih Y. Rebouh

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1659278

1,988 views

Original Research

Published on 18 Sep 2025

In-depth comparison of commercial Trichoderma-based products: integrative approaches to quantitative analysis, taxonomy and efficacy

in Microbe and Virus Interactions with Plants

Tomasz Kulik
Paulina Staniszewska
Patryk Wiśniewski
Zofia Treder
Maciej Przybylski
Ewa Wrońska
Mateusz Maździarz
Katarzyna Krawczyk
Katarzyna Bilska
Łukasz Paukszto

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1646394

2,827 views

Original Research

Published on 17 Sep 2025

Isolation and growth-promoting mechanisms of phosphate-solubilizing bacteria from Qinghai-Tibet Plateau in Lespedeza bicolor Turcz

in Microbe and Virus Interactions with Plants

Xinru Zhang
Wenjia Liu
Jiayi Liu
Xiaoli Mei
Jinghua Zhang
Dong Wang
Xiaoxia Zhang
Jiayao Zhuang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1669774

2,025 views

Original Research

Published on 16 Sep 2025

Spatiotemporal analysis of the structure and genetic diversity of Stemphylium vesicarium populations in New York onion fields

in Microbe and Virus Interactions with Plants

Aastha Subedi
Daniel W. Heck
Frank Hay
Natalia Piñeros-Guerrero
Sarah J. Pethybridge

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1666712

2,303 views

Original Research

Published on 16 Sep 2025

Seed transmission of Carlavirus vignae (Cowpea mild mottle virus): a hidden driver of veinal necrosis and bud blight disease in soybean (Glycine max) in India

in Microbe and Virus Interactions with Plants

Dhruva Nitin Bhagwatkar
Nagamani Sandra
Ankita Tripathi
Garima Dalal
Sharankumar Kesaratagi
Manisha Saini
Sandeep Kumar Lal
Sanjay Kumar Lal

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1654471

2,136 views

Original Research

Published on 15 Sep 2025

Multi-omics analysis reveals the alleviating effect of oxidation remediation on tobacco quinclorac stress

in Microbe and Virus Interactions with Plants

Binghui Zhang
Ting Yang
Chenliang Cheng
Tong Li
Ni Zhang
Fei Wang
Wencan Chen
Zhiping Zhong
Zhaoxiang Liu
Gang Gu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1625585

2,138 views

Original Research

Published on 12 Sep 2025

Seasonal and regional structuring of rhizosphere fungal communities in Macadamia integrifolia

in Microbe and Virus Interactions with Plants

Ya Ning
Yuchun Chen
Zhonghua Wu
Tingmei Yang
Xiyong He
Hai Yue

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1634222

1,924 views

Original Research

Published on 10 Sep 2025

Continuous watermelon cropping impairs plant growth by modifying soil biochemistry and rhizosphere microbial communities

in Microbe and Virus Interactions with Plants

HuiFang Lv
Rui Sang
LingLing Huang
YueChen Long
DeCong Xu
MingXia Wang
QiAn Zhang
Li Jia
QiangQiang Ding
CongSheng Yan

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1648481

2,315 views

Original Research

Published on 09 Sep 2025

Comprehensive genomic and functional characterization of a phytoplasma associated with root retardation, early bolting, witches’-broom, and phyllody in daikon (Raphanus sativus L.)

in Microbe and Virus Interactions with Plants

Yi-Ching Chiu
Yu-Chen Lin
Shang-Hung Pao
Yuh-Kun Chen
Pei-Qing Liao
Helen Mae Mejia
Chiou-Rong Sheue
Chih-Horng Kuo
Jun-Yi Yang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1654928

2,372 views
1 citation

Original Research

Published on 09 Sep 2025

Understanding the impact of soil microbiome on strawberry growth and nutritional profiles

in Microbe and Virus Interactions with Plants

Min-Jin Kwak
Sriniwas Pandey
Yuting Zhai
Bugil Choi
Thanyachanok Sutthanonkul
Won Suk Lee
Kwangcheol C. Jeong

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1654776

2,048 views

Original Research

Published on 04 Sep 2025

Integrated metabarcoding and culture-dependent assessments reveal Pseudomonas as dominant hyphosphere-pathobiont in Race 4 Fusarium wilt pathogen of cotton

in Microbe and Virus Interactions with Plants

Sanjay Antony-Babu
Gayan Abeysinghe
Vanessa Elizabeth Thomas
Cara Hockenbury
Shravan Sharma Parunandi
Amrita Dasgupta
Tristan Andrew Gregory
Amrita Sai Gabu
Haden Ball
Thomas M. Chappell

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1661556

2,972 views
1 citation

Original Research

Published on 03 Sep 2025

Microbial niche differentiation and agronomic performance of diseased Capsicum annuum

in Microbe and Virus Interactions with Plants

Zhiqi Yang
Yankun Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1576486

2,291 views
1 citation

Original Research

Published on 01 Sep 2025

Analysis of the community composition and diversity of endophytes in extremely spicy industrial chili peppers from Tibet using high-throughput sequencing

in Microbe and Virus Interactions with Plants

Junze Zhang
Yebing Yin
Yanying Wang
Sicen Luo
Yu Li
Wenxiang Zhao
Pengxi Cao
Yixuan Liu
Hongmei Ma

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1630090

1,850 views

1,779 articles

articles

Rhizosphere microbiomes of field-grown B. stricta exhibit minimal diel changes in microbial membership and protein synthesis potential

Identification, biological characteristics, and screening of control agents against root rot of Ardisia crenata Sims in China

Molecular identification and pathogenic impact of Pythium aphanidermatum on ginger (Zingiber officinale): insights into oxidative stress, antioxidant responses, and mycotoxin profiling

Endophytic bacteria Priestia megaterium 170T-4 improves soybean salt tolerance through regulation of ion homeostasis and phytohormone signaling pathways

Editorial: Microbial stress mitigation and crop improvement using multiomics holistic approach

Engineering nitrogen-fixing microbiomes with waste-derived carbon sources: toward circular and resilient biofertilizer solution

AMF promotes the structure and metabolic activity of rhizosphere soil microbial communities in areca/vanilla intercropping system under nitrogen-limited conditions

Microbial-mediated induced resistance: interactive effects for improving crop health

Soil viruses drive carbon turnover during subtropical secondary forest succession

Geographic variation in fungal diversity associated with leaf spot symptoms of Coffea arabica in Yunnan, China

Isolation and characterization of new antagonistic bacteria P10-7 and evaluation of its biocontrol potential against tomato gray mold

Multi-potent rhizobacteria enhance banana growth and reduce chemical fertilizer input

In-depth comparison of commercial Trichoderma-based products: integrative approaches to quantitative analysis, taxonomy and efficacy

Isolation and growth-promoting mechanisms of phosphate-solubilizing bacteria from Qinghai-Tibet Plateau in Lespedeza bicolor Turcz

Spatiotemporal analysis of the structure and genetic diversity of Stemphylium vesicarium populations in New York onion fields

Seed transmission of Carlavirus vignae (Cowpea mild mottle virus): a hidden driver of veinal necrosis and bud blight disease in soybean (Glycine max) in India

Multi-omics analysis reveals the alleviating effect of oxidation remediation on tobacco quinclorac stress

Seasonal and regional structuring of rhizosphere fungal communities in Macadamia integrifolia

Continuous watermelon cropping impairs plant growth by modifying soil biochemistry and rhizosphere microbial communities

Comprehensive genomic and functional characterization of a phytoplasma associated with root retardation, early bolting, witches’-broom, and phyllody in daikon (Raphanus sativus L.)

Understanding the impact of soil microbiome on strawberry growth and nutritional profiles

Integrated metabarcoding and culture-dependent assessments reveal Pseudomonas as dominant hyphosphere-pathobiont in Race 4 Fusarium wilt pathogen of cotton

Microbial niche differentiation and agronomic performance of diseased Capsicum annuum

Analysis of the community composition and diversity of endophytes in extremely spicy industrial chili peppers from Tibet using high-throughput sequencing