Frontiers in Ecology and Evolution | Phylogenetics, Phylogenomics, and Systematics

Original Research

Published on 26 Feb 2020

The Essential Role of Taxonomic Expertise in the Creation of DNA Databases for the Identification and Delimitation of Southeast Asian Ambrosia Beetle Species (Curculionidae: Scolytinae: Xyleborini)

in Phylogenetics, Phylogenomics, and Systematics

Anthony I. Cognato
Gina Sari
Sarah M. Smith
Roger A. Beaver
You Li
Jiri Hulcr
Bjarte H. Jordal
Hisashi Kajimura
Ching-Shan Lin
Thai Hong Pham

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2020.00027

10,246 views
60 citations

Original Research

Published on 21 Feb 2020

PCR Cloning Combined With DNA Barcoding Enables Partial Identification of Fish Species in a Mixed-Species Product

in Phylogenetics, Phylogenomics, and Systematics

Anthony J. Silva
Michael Kawalek
Donna M. Williams-Hill
Rosalee S. Hellberg

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2020.00028

8,367 views
11 citations

Original Research

Published on 22 Jan 2020

Phylogenetic Systematics of the Water Toad (Bufo stejnegeri) Elucidates the Evolution of Semi-aquatic Toad Ecology and Pleistocene Glacial Refugia

in Phylogenetics, Phylogenomics, and Systematics

Jonathan J. Fong
Bao-Tian Yang
Pi-Peng Li
Bruce Waldman
Mi-Sook Min

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00523

5,462 views
16 citations

Original Research

Published on 19 Dec 2019

The Challenge of DNA Barcoding Saproxylic Beetles in Natural History Collections—Exploring the Potential of Parallel Multiplex Sequencing With Illumina MiSeq

in Phylogenetics, Phylogenomics, and Systematics

Lucas Sire
Delphine Gey
Régis Debruyne
Thierry Noblecourt
Fabien Soldati
Thomas Barnouin
Guilhem Parmain
Christophe Bouget
Carlos Lopez-Vaamonde
Rodolphe Rougerie

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00495

5,505 views
18 citations

Original Research

Published on 13 Dec 2019

Whole Genome Shotgun Sequencing Detects Greater Lichen Fungal Diversity Than Amplicon-Based Methods in Environmental Samples

in Phylogenetics, Phylogenomics, and Systematics

Kyle Garrett Keepers
Cloe S. Pogoda
Kristin H. White
Carly R. Anderson Stewart
Jordan R. Hoffman
Ana Maria Ruiz
Christy M. McCain
James C. Lendemer
Nolan Coburn Kane
Erin A. Tripp

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00484

7,848 views
19 citations

Data Report

Published on 06 Dec 2019

Draft Genome Assembly of a Fouling Barnacle, Amphibalanus amphitrite (Darwin, 1854): The First Reference Genome for Thecostraca

in Phylogenetics, Phylogenomics, and Systematics

Jee-Hoon Kim
Hyunkyong Kim
Heesoo Kim
Benny K.K. Chan
Seunghyun Kang
Won Kim

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00465

4,934 views
24 citations

Perspective

Published on 04 Dec 2019

Filling in the Gaps: Adopting Ultraconserved Elements Alongside COI to Strengthen Metabarcoding Studies

in Phylogenetics, Phylogenomics, and Systematics

Mac P. Pierce

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00469

3,905 views
6 citations

Data Report

Published on 24 Oct 2019

Draft Genome Assembly and Annotation of the Gila Topminnow Poeciliopsis occidentalis

in Phylogenetics, Phylogenomics, and Systematics

Mariana Mateos
Du Kang
Christophe Klopp
Hugues Parrinello
Mateo García-Olazábal
Molly Schumer
Nathaniel K. Jue
Yann Guiguen
Manfred Schartl

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00404

5,709 views
4 citations

Original Research

Published on 07 Oct 2019

Old World and New World Phasmatodea: Phylogenomics Resolve the Evolutionary History of Stick and Leaf Insects

in Phylogenetics, Phylogenomics, and Systematics

Sabrina Simon
Harald Letsch
Sarah Bank
Thomas R. Buckley
Alexander Donath
Shanlin Liu
Ryuichiro Machida
Karen Meusemann
Bernhard Misof
Lars Podsiadlowski

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00345

24,532 views
98 citations

Review

Published on 18 Sep 2019

The Mitochondrial Genome–on Selective Constraints and Signatures at the Organism, Cell, and Single Mitochondrion Levels

in Phylogenetics, Phylogenomics, and Systematics

Noam Shtolz
Dan Mishmar

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00342

17,914 views
82 citations

Systematic Review

Published on 10 Sep 2019

Review and Interpretation of Trends in DNA Barcoding

in Phylogenetics, Phylogenomics, and Systematics

Rob DeSalle
Paul Goldstein

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00302

52,682 views
261 citations

Methods

Published on 24 May 2019

Selective Inference for Testing Trees and Edges in Phylogenetics

in Phylogenetics, Phylogenomics, and Systematics

Hidetoshi Shimodaira
Yoshikazu Terada

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00174

4,358 views
14 citations

Original Research

Published on 16 Apr 2019

Multiple Introductions of Mycobacterium tuberculosis Lineage 2–Beijing Into Africa Over Centuries

in Phylogenetics, Phylogenomics, and Systematics

Liliana K. Rutaihwa
Fabrizio Menardo
David Stucki
Sebastian M. Gygli
Serej D. Ley
Bijaya Malla
Julia Feldmann
Sonia Borrell
Christian Beisel
Kerren Middelkoop

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00112

12,981 views
40 citations

Original Research

Published on 05 Apr 2019

Olfactory Proteins in Timema Stick Insects

in Phylogenetics, Phylogenomics, and Systematics

Darren J. Parker
Jelisaveta Djordjevic
Tanja Schwander

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00101

3,036 views
1 citation

Data Report

Published on 05 Apr 2019

Chloroplast Genome of the Soap Bark Tree Quillaja saponaria

in Phylogenetics, Phylogenomics, and Systematics

Paula Vizoso
Soledad Francisca Undurraga
Juan Velozo

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00104

4,061 views
2 citations

Original Research

Published on 02 Apr 2019

When Giant Stick Insects Play With Colors: Molecular Phylogeny of the Achriopterini and Description of Two New Splendid Species (Phasmatodea: Achrioptera) From Madagascar

in Phylogenetics, Phylogenomics, and Systematics

Frank Glaw
Oliver Hawlitschek
Andreas Dunz
Julia Goldberg
Sven Bradler

Frontiers in Ecology and Evolution

doi 10.3389/fevo.2019.00105

32,833 views
21 citations