Abstract
The leaf phenology of seasonally dry tropical forests (SDTFs) is highly seasonal, marked by synchronized flushing of new leaves triggered by the first rains of the wet season. Such phenological transitions may not be accurately detected by remote sensing vegetation indices and derived transition dates (TDs) due to the coarse spatial and temporal resolutions of satellite data. The aim of this study was to compared TDs from PhenoCams and satellite remote sensing (RS) and used the TDs calculated from PhenoCams to select the best thresholds for RS time series and calculate TDs. For this purpose, we assembled cameras in seven sites along an aridity gradient in the Brazilian Caatinga, a region dominated by SDTFs. The leafing patterns were registered during one to three growing seasons from 2017 to 2020. We drew a region of interest (ROI) in the images to calculate the normalized green chromatic coordinate index. We compared the camera data with the NDVI time series (2000–2019) derived from near-infrared (NIR) and red bands from MODIS product data. Using calibrated PhenoCam thresholds reduced the mean absolute error by 5 days for SOS and 34 days for EOS, compared to common thresholds in land surface phenology studies. On average, growing season length (LOS) did not differ significantly among vegetation types, but the driest sites showed the highest interannual variation. This pattern was applied to leaf flushing (SOS) and leaf fall (EOS) as well. We found a positive relationship between the accumulated precipitation and the LOS and between the accumulated precipitation and maximum and minimum temperatures and the vegetation productivity (peak and accumulated NDVI). Our results demonstrated that (A) the fine temporal resolution of phenocamera phenology time series improved the definitions of TDs and thresholds for RS landscape phenology; (b) long-term RS greening responded to the variability in rainfall, adjusting their timing of green-up and green-down, and (C) the amount of rainfall, although not determinant for the length of the growing season, is related to the estimates of vegetation productivity.
1 Introduction
Phenological data have been successfully used to understand ecological aspects from the individual level, as in plant–animal interactions (Morellato et al., 2016), to the ecosystem level, in terms of the role of vegetation dynamics in driving carbon and energy fluxes (Reich, 1995; Polgar and Primack, 2011; Richardson et al., 2013). The newly realized potential of phenology as a monitoring tool, in tandem with recent advances in technology, has enabled the use of automated phenological monitoring techniques at different levels of observation (Morellato et al., 2016; ; ; Piao et al., 2019). New digital near-remote sensing sensors have proven to effectively monitor multiple sites (Richardson et al., 2018) while advancing in answering key ecological questions even for tropical regions (; ; ; Paloschi et al., 2020; ; ; Wang et al., 2023).
Land surface phenology (LSP) works with satellite imagery collections from a wide variety of orbital sensors. Among the most commonly applied mechanisms to track long-term leafing trends are the MODIS products (; ). The derived time series of vegetation indices (VIs), such as enhanced vegetation index (EVI) and normalized difference vegetation index (NDVI), is the base for calculations of the phenological metrics that define the growing seasons, such as the start of season (SOS), the peak of season (POS), and the end of season (EOS), that in general correspond to the green-up, maturity, and senescence stages of a target vegetation (Zhang et al., 2003; Tuanmu et al., 2010; ). Leafing transition dates derived from MODIS time series have been reliably applied to the regional scale for seasonal vegetation in the tropics (Streher et al., 2017). Nonetheless, the evaluation of the correspondence between satellite-derived transition dates and community biological events (phenophases) remains a challenge since leaf transitions cannot be identified from moderate-resolution remote sensing images, yet most studies do not validate satellite data with on-the-ground phenological observations or ground-based sensors (; Rankine et al., 2017).
Several methods have been applied to calculate phenological metrics from satellite-derived time series data (; ; ; ; Zeng et al., 2020). The curve fitting is a common approach (e.g., Gaussian or logistic models) based on the detection of changes in the curvature rate of the greening and green-down patterns and usually defining standardized thresholds from the seasonal amplitude of the curve (e.g., 10, 20, 50%, and 90%; Zhang et al., 2003; ; ; Tuanmu et al., 2010). In this sense, the usage of PhenoCam, a ground-based digital sensor, has been proposed as a tool to validate or complement satellite data by testing the correspondence and the bias between the transition dates derived from both satellites and phenocameras (; ; Zhang et al., 2018; Thapa et al., 2021). Nevertheless, the usage of phenocamera time series to calibrate satellite indices, based on the choice of the best representative threshold for a given transition date, has been rarely applied (Richardson et al., 2018). This can be particularly important for a fast-response vegetation, such as the Brazilian Caatinga, a seasonally dry tropical forest (SDTF), as the minimum time interval for the currently available remote satellite imagery is about 7–15 days, and constant cloudiness may reduce the available temporal imagery. The Caatinga biome is dominated by deciduous tree species, mainly driven by soil moisture seasonality (Vico et al., 2015; Paloschi et al., 2020; Wright et al., 2021), changing from leafless to fully developed crowns a few days after the first rainfall events (; ).
The Brazilian Caatinga biome is characterized by low annual rainfall, ranging from 250 to 1,200 mm, and a long dry season with elevated air temperatures (; ). Most tree species from the Caatinga are deciduous, remaining leafless (100% leaf shedding) throughout the dry season. This phenological behavior is regarded as an adaptation to avoid water loss or irreversible collapse of xylem water transport capabilities during the dry season (Wright et al., 2021). Consequently, leaf flushing and leaf shedding in the Caatinga are driven mainly by changes in soil moisture (Paloschi et al., 2020; Wright et al., 2021) and, therefore, rainfall patterns (). While leaf flushing is triggered synchronically among species and takes place a few days after a rain event, even a minor event (Oliveira et al., 2015; ), the patterns of leaf fall are more diverse, with some species shedding their leaves few days after the rainfall cessation and others staying green for longer periods (; Lima et al., 2012; Pezzini et al., 2014; Oliveira et al., 2015; Silva et al., 2020). The finely resolved daily phenological observations of repeated digital photographs provide essential information to detect the transition dates in this system characterized by the fast response of vegetation to rainfall ().
Semi-arid ecosystems exert a dominant role in the trend and interannual variations of terrestrial CO2 uptake (). The vegetation phenology is tightly associated with productivity in ecosystems with pronounced seasonal rainfall (; ). Accurately identifying the timing of leaf flush and fall is essential for comprehending how these ecosystems transition from carbon sinks and sources throughout the year. The validation of Land Surface Phenology (LSP) using phenocamera data, as conducted in tropical ecosystems by Wang et al. (2023), assumes paramount significance when one aims to precisely determine the phenological transition dates measured with LSP. This importance stems from the inherent limitations of calculating transition dates from satellite-derived indices, as explained earlier. Therefore, the calibration of RS method-derived phenological transition dates is essential to provide reliable information for the assessment of large-scale ecological processes.
The Caatinga is the largest continuous SDTF in the world (849.516 km2; see ; ). Its distribution over a wide geographic area favors considerable variability of rainfall patterns, resulting in spatially different dry season time, intensity, and length (Sampaio, 1995; ; ). More specifically, there is a gradient of increasing aridity and interannual variability in rainfall from the coastal areas toward the middle of the continent (Sampaio, 1995; Souza et al., 2016; ). The spatial and interannual variability of rainfall patterns present across the Caatinga distribution range may strongly influence the leafing patterns of local Caatinga vegetation (Ramos et al., unpublished), reinforcing the importance of calibrated RS methods to accurately measure long-term phenological patterns across areas, encompassing environmental variability.
The implementation of precise methods for monitoring the timing of phenological events and their responsiveness to environmental conditions is an essential step toward understanding shifts related to climate change. Therefore, phenocamera monitoring may allow for a deeper comprehension of climate change impacts across SDTFs. Furthermore, the Caatinga region is home to numerous rural communities that depend on agriculture and natural resources for their sustenance (; Ribeiro et al., 2015). Gaining insight into phenological patterns becomes paramount in order to optimize the scheduling of crop planting and harvesting, as well as to promote the sustainable management of natural resources. Accurate phenological data serve as a valuable tool for enhancing agricultural practices and safeguarding the livelihoods of local communities ().
Thus, here, we address the following questions: (1) Can the daily time series (green chromatic coordinates) obtained by ground-based phenocamera digital images calibrate satellite RS methods by the extraction of phenological transition dates in SDTFs? We used the phenocamera-derived transition dates to estimate the optimum thresholds for the measurements of satellite-derived phenological transition dates in seven sites with different vegetation structures and gradients of aridity in the Caatinga SDTF. (2) Does the land surface phenology of SDTF change across a gradient with contrasting environmental conditions and vegetation structure? (3) Do the accumulated rainfall, soil moisture, water deficit, and air temperature influence the long-term greening responses detected by land surface NDVI across the SDTFs? We apply RS techniques after calibration with phenocamera data to quantify the land surface phenological transition dates and length of the growing season in seven areas of Caatinga, using a MODIS time series of 20 years, evaluating how these different SDTFs respond to changes in the environmental factors across the aridity gradient. Regarding the second objective, our hypothesis is that as the aridity increases, the length of the growing season is shortened, increasing interannual variability. In a similar way, for the leaf flushing and fall seasons, we expect increasing interannual variability as the aridity increases. For the third objective, we expect to find a significant influence of water availability, such as accumulated rainfall, soil moisture, and water deficit, shortening the growing season as the aridity increases. Conversely, in less arid sites, temperature emerges as a key factor influencing the time and length of the growing season.
2 Materials and methods
2.1 Study area
The Caatinga vegetation is the largest SDTF in the New World, occurring mainly in Northeastern Brazil under a semi-arid climate, Köppen’s BSh (). We have set up permanent plots for long-term monitoring at seven areas in the Caatinga (Figure 1) across a range of aridity gradient levels (Table 1).
FIGURE 1
TABLE 1
| Sites | Rainfall (mm/year) | Aridity index | Wet/dry seasons |
|---|---|---|---|
| Petrolina | 485.1 | 0.32 | Jan–Apr/May–Dec |
| Serra Talhada | 665.8 | 0.43 | Nov–Apr/May–Oct |
| São João | 716.6 | 0.53 | Mar–July/Aug–Feb |
| Campina Grande | 544.6 | 0.37 | Mar–July/Aug–Feb |
| Cajueiro 1 | 711.9 | 0.48 | Nov–May/Mar–Set |
| Cajueiro 2 | 712.1 | 0.48 | Nov–May/Mar–Set |
| Mata Seca | 706.9 | 0.48 | Nov–May/Mar–Set |
Mean annual rainfall, aridity index, and the start and end dates of the wet and dry seasons for the Caatinga sites.
The aridity index is calculated as the ratio between the mean annual precipitation and the annual potential evapotranspiration. We used the global aridity index database (Zomer et al., 2022).
2.1.1 Petrolina
It is located at a protected area from the Brazilian Agricultural Research Corporation (Embrapa, semi-arid unit), Petrolina (PET) Municipality (9.0480° S, 40.3198° W), Pernambuco State, at 395 m a.s.l. The area has been protected from grazing and anthropic disturbances for the last 40 years. The most common soil is Acrisol, and the vegetation is a scrubland composed of trees with an average height of ∼4.5 m and tree density of approximately 500 individuals ha−1 over an herbaceous and shrubby stratum dominated by bromeliads. The dominant tree species are Senegalia polyphylla (DC.) Britton and Rose (Fabaceae), Manihot sp. (Euphorbiaceae), Cenostigma microphyllum (Mart. ex G. Don) Gagnon and G.P. Lewis (Fabaceae), Sapium glandulosum (L.) Morong (Euphorbiaceae), Handroanthus spongiosus (Rizzini) S.Grose (Bignoniaceae), and Commiphora leptophloeos (Mart.) J.B.Gillett (Burseraceae). Together, these species account for 88% of the area’s total relative abundance of trees.
2.1.2 Serra Talhada
It is an experimental area located at Serra Talhada (STA) Municipality (7.97008° S; 38.3849° W), Pernambuco State, at 467 m a.s.l. Cattle and goats graze the area during the rainy season. The main soil class is Calcisol, and the vegetation is mainly composed of trees with an average height of ∼5 m and tree density of approximately 780 individuals ha−1. The dominant tree species are Aspidosperma pyrifolium Mart. and Zucc. (Apocynaceae), Cenostigma nordestinum Gagnon and G.P. Lewis (Fabaceae), S. polyphylla, and Anadenanthera colubrina var. cebil (Griseb.) Altschul (Fabaceae). Together, these species account for 79% of the area’s total relative abundance of trees.
2.1.3 São João
It is an experimental area surrounded by agricultural lands located at São João (SJO) Municipality (8.80967°S; 36.4054°W), Pernambuco State, at 762 m a.s.l. Cattle and goats graze the area during the entire year. The most common soil is Arenosol, and the vegetation is mainly composed of trees with an average height of ∼5 m and tree density of approximately 670 individuals ha−1. The dominant tree species are Pilosocereus pachycladus F.Ritter (Cactaceae), C. leptophloeos, Mimosa tenuiflora (Willd.) Poir. (Fabaceae), Piptadenia flava (Spreng. ex DC.) Benth. (Fabaceae), Lippia origanoides Kunth (Verbenaceae), and S. glandulosum. Together, these species account for 71% of the area’s total relative abundance of trees.
2.1.4 Campina Grande
It is a protected area from the Instituto Nacional do Semiárido (INSA) located at Campina Grande (CGA) Municipality (7.280389° S; 35.976307° W), Paraíba State, at 493 m a.s.l. The area has been protected from grazing and anthropic disturbances for the last 10 years. The main soil class is sandy loam, and the vegetation is mainly composed of trees with an average height of ∼5.1 m and tree density of approximately 675 individuals ha−1. The dominant tree species are Cenostigma pyramidale (Tul.) Gagnon and G.P. Lewis (Fabaceae), Combretum monetaria Mart. (Combretaceae), A. pyrifolium, Manihot sp., and P. flava. Together, these species account for 71% of the area’s total relative abundance of trees.
2.1.5 Parque Loagoa do Cajueiro (CAJ 1 and CAJ 2)
It is a conservation area located at Matias Cardoso Municipality, Minas Gerais State, at 462 a.s.l. The mean annual total precipitation is around 712 mm, there are five dry months, and the average annual temperature is 24 °C (Pezzini et al., 2014). There are two distinct vegetation types in the area, and we set up a Mobotix camera in the first and a Bushnell camera in the second. The vegetation in the first area (CAJ 1) is a tall forest composed of trees with an average height of ∼13 m with a closed canopy (∼85%). The dominant tree species are Cenostigma pluviosum var. sanfranciscanum (G.P.Lewis) Gagnon and G.P. Lewis (Fabaceae), A. colubrina (Vell.) Brenan (Fabaceae), Astronium urundeuva M. Allemão (Anacardiaceae), and Plathymenia reticulata Benth. (Fabaceae). The vegetation in the second area (CAJ 2) is an open scrubland SDTF (Carrasco) composed of trees with an average height of ∼4 m with an open canopy (∼30%). The dominant tree species are A. pyrifolium, Callisthene microphylla Warm. (Vochysiaceae), Cenostigma macrophyllum Tul. (Fabaceae), Guapira tomentosa (Casar.) Lundell (Nyctaginaceae), Mimosa arenosa (Willd.) Poir. (Fabaceae), Poecilanthe ulei (Harms) Arroyo and Rudd (Fabaceae), Pterocarpus rohrii Vahl (Fabaceae), Pterodon emarginatus Vogel (Fabaceae), and Terminalia fagifolia Mart. (Combretaceae).
2.1.6 Parque Estadual da Mata Seca
The sixth site is a conservation area located at Manga Municipality, Minas Gerais State, at 462 a.s.l. The area is 3 km from CAJ, the previous site. The mean annual precipitation is 706.9 mm, with five dry season months and 24 °C of mean annual temperature (Pezzini et al., 2014). The vegetation in the area is a tall forest composed of trees with an average height of ∼13 m with a closed canopy (∼95%) and the absence of an herbaceous and shrub layer. The dominant tree species are Handroanthus ochraceus (Cham.) Mattos (Bignoniaceae), Amburana cearensis (Allemão) A.C.Sm. (Fabaceae), A. urundeuva, and Cavanillesia umbellata Ruiz and Pav (Malvaceae).
2.2 Methodology
2.2.1 Camera set up, image acquisition and processing
2.2.1.1 Phenocameras set up and phenological in situ time series
Camera setup: We used images from seven cameras in this study: four digital hemispherical lens MOBOTIX Q25 cameras (MOBOTIX AG, Germany; for detailed information on the usage of MOBOTIX cameras for phenological observations (see
FIGURE 2

General location of the Caatinga study sites. (A) The MODIS pixels (Left), with the phenocamera indicated by the white dot, and the respective typical phenocamera images (right): (B) STA, (C) SJO, (D) PET, (E) CCR, (F) CAJ 1, (G) CAJ 2, and (H) MSC. The globe web-based map was derived from Bing satellite.
Cameras were programmed to take daily images, varying from three to four images, in the first 5 minutes of each hour, from 06:00 a.m. to 06:00 p.m. (UC-3; Universal Time Coordinated). Images were taken in the JPEG format with a pixel resolution of 1,280 × 960 (
Images were visually screened to remove photographs with an obstructed field of view. To represent the plant community of each site, we drew a region of interest (ROI) in the images, which consisted of the selection of the entire vegetated area but excluded the bare ground, the tower area (for the Mobotix images), and the borders of the image (
To suppress day-to-day illumination issues in the GCC time series, we calculated the 90th percentile of all mid-day photographs (from 10:00 a.m. to 16:00 p.m.) (adapted from the work of Sonnentag et al., 2012). For data analysis, we used daily GCC time series.
2.2.1.2 Satellite data
The MODIS 16-day nadir BRDF-adjusted reflectance product (MCD43A4) provided the red and near-infrared (NIR) bands for the NDVI calculation. This dataset is produced daily using 16 days of Terra and Aqua MODIS data at 500 m resolution (
The images used in this study were from February 2000 to December 2020. The NDVI series were assembled for each experimental site with the pixel value of the MCD43A4 product, the phenocamera being the central pixel of the geographic coordinates of each test site (Figure 2). The processes for obtaining time series NDVI MODIS were performed using the Google Earth Engine (GEE) tool (
2.3 Data analyses
The workflow to calculate phenological metrics from remote sensing and phenocamera data is described in Figure 3.
FIGURE 3

Flow chart of the methodology used to calculate the phenological metrics, SOS, EOS, and LOS based on phenocamera in situ and NDVI MODIS time series.
2.3.1 Phenological metrics extracted from the GCC time series
We applied generalized additive models (GAMs) to the camera-derived GCC time series to produce phenological curves (
2.3.2 Phenological metrics extracted from the NDVI time series
In the initial step, the NDVI time series were calculated in Google Earth Engine (GEE) using near-infrared (NIR) and red bands from MODIS product data (MCD43A4). Next, we used TIMESAT software (
TABLE 2
| Metric | Description phenocamera | Description satellite MOI |
|---|---|---|
| Start of season | Time for which the derivatives were increasing at 50% threshold of the greenness rising | Time for which the left edge has increased to 5%, 10%, 15%, and 20% of the seasonal amplitude measured from the left minimum level |
| End of season | Time for which the derivatives were decreasing at 80% threshold of the greenness falling | Time for which the right edge has decreased to 5%, 10%, 15%, and 20% of the seasonal amplitude |
| Length of season | Time between the start and end of the growing season | Time between the start and end of the growing season |
| Maximum value | Maximum index value for the fitted function during the season | Maximum index value for the fitted function during the season |
Phenological metrics calculated from indices extracted from the phenocamera near-surface phenology (GCC) and from the satellite MODIS land surface phenology (NDVI) indices.
Satellite description was adapted from the work of Reed et al. (1994) and
TIMESAT software defines the percentage of the amplitude (threshold) for the vegetation index used. Different amplitude percentages were tested to assess the most appropriate value for all seven sites studied. The phenological metrics derived from the in situ cameras (see Section 2.4.1) were the reference used to evaluate the remote sensing data (i.e., the threshold that corresponds to a given phenocamera transition date). Then, based on the phenocamera thresholds estimated, we set the TIMESAT parameters for estimating the phenological metrics of a 20-year NDVI time series spanning from 2000 to 2019. We calculated the same aforementioned phenological metrics (SOS, EOS, LOS, PEAK, and AMPL) for the twenty-year NDVI time series.
2.4 Statistical analyses
2.4.1 Evaluating remote sensing phenological metrics
To evaluate the better parameters to calculate the remote sensing phenological metrics (SOS and EOS), four amplitudes were tested with different percentiles: 5%, 10%, 15%, and 20%, and compared with the in situ phenological data using the statistical mean absolute error (MAE) (Eq. 3). The thresholds 5%, 10%, 15%, and 20% are commonly used in the literature (Teles et al., 2015;
2.4.2 Long-term seasonality patterns of the Caatinga and its environmental drivers
To understand the temporal variability of land surface phenology across the Caatinga sites, we used descriptive circular statistics (Zar, 1996; Morellato et al., 2000;
To evaluate how environmental factors influence land surface phenology across the Caatinga sites, we fitted linear models (lm R function). We examined variation in phenological metrics (length of the growing season (LOS) and productivity (accumulated NDVI and peak of NDVI) as a function of environmental factors using the time series of all sites together. Environmental factors included accumulated precipitation, water deficit, soil moisture, and minimum and maximum temperatures. The environmental factors used in this study were obtained from the TerraClimate database (
3 Results
3.1 Phenological patterns from phenocameras and satellite
We recorded phenology simultaneously using phenocameras (GCC) from 2017–2020, which encompassed one to three complete growing seasons, depending on the site (Supplementary Table S1; Figure 4) and overlapping with the MODIS time series (NDVI). The vegetation of all sites showed a seasonal leafing pattern (Figure 4), with marked leaf flushing (GCC and NDVI rising) and leaf fall (GCC and NDVI declining), except for the last growing season (2019–2020) of CAJ 1 registered using a phenocamera, which had 352 days of duration (Supplementary Table S1). For each growing season, the NDVI always peaked after the GCC (Figure 4). The LOS for the Caatinga sites determined using phenocameras was highly variable, ranging from 177 in the driest site, Petrolina, to 352 days in the wettest site, Cajueiro 1, the tallest forest site (Supplementary Table S1). Additionally, there was high interannual variability in the LOS in the three driest sites, ranging from 177 to 245 days, from 216 to 265, and from 229 to 292 in Petrolina, Serra Talhada, and Campina Grande, respectively (Supplementary Table S1).
FIGURE 4

Phenocamera GCC (green dots) and MODIS NDVI (orange dots) time series after calibration and the respective phenological transition dates, start of season, and end of season, from 2017 to 2020 for the sites of Petrolina, Campina Grande, Serra Talhada, São João, Cajueiro 1, Cajueiro 2, and Mata Seca. The GCC green dots correspond to the 90th percentiles extracted from the images of the mid-day hours (from 10:00 to 14:00 h), and the NDVI values correspond to the Savitzky–Golay smoothed time series. The vertical lines correspond to the phenological transition dates, SOS (continuous lines), and EOS (dashed lines) calculated for the GCC and NDVI, green and orange lines, respectively.
3.2 Evaluating phenophase transition dates from all platforms
In general, there was good agreement between the SOS calculated from GCC and NDVI time series. The SOS dates for MODIS were biased early by 5 days on average (Supplementary Table S2) in relation to the SOS phenocamera in the lowest MAE selected (5% threshold). The MAE of the SOS dates calculated from the satellite time series in comparison to the camera-derived SOS was highly variable across sites, changing from 6 days at CGA to 53 days at SJO (Table 3). The MAE across sites varied with the threshold used (Table 3), with the 5% threshold resulting in the lowest MAE (14.9 days; Table 3). The usage of the 5% threshold reduced the MAE by 5.27 days compared to the 20% threshold, which is a commonly used value for land surface phenology but produced the highest values of MAE for the Caatinga sites (Table 3).
TABLE 3
| Sites | SOS - MAE (day) | |||
|---|---|---|---|---|
| 5% | 10% | 15% | 20% | |
| Petrolina | 28.10 | 26.20 | 25.50 | 20.53 |
| Serra Talhada | 7.43 | 12.53 | 11.17 | 14.20 |
| São João | 8.65 | 13.90 | 52.50 | 53.40 |
| Campina Grande | 16.00 | 11.65 | 8.15 | 6.00 |
| Cajueiro 1 | 14.25 | 17.70 | 20.15 | 21.95 |
| Cajueiro 2 | 15.00 | 11.00 | 8.00 | 5.00 |
| Mean | 14.91 | 15.50 | 20.91 | 20.18 |
Mean absolute error (MAE) of the start of season estimates varying the values of the estimate and seasonal amplitudes in TIMESAT.
The agreement between the EOS calculated from the GCC and the NDVI time series was worse when compared to the SOS phenophase. The EOS dates for MODIS were biased late by 11 days on average (Supplementary Table S3) in relation to EOS PhenoCam in the lowest MAE selected (20% threshold). The MAE of the EOS dates calculated from the satellite time series in comparison to the camera-derived EOS was highly variable across sites, changing from 9 days at CGA to 99 days at SJO, but was, in general, higher than the MAE for the SOS dates (Table 4). The MAE across sites varied with the threshold used (Table 4), with the 20% threshold resulting in the lowest MAE (25.60 days; Table 4). The usage of the 20% threshold reduced the MAE by 34.34 days compared to the 5% threshold, which produced the highest values of MAE (59.94 days; Table 4). Additionally, usage of the 20% threshold reduced the MAE by 15.60% (Table 4) compared to the 10% threshold, a commonly used value for LSP.
TABLE 4
| Sites | EOS - MAE (day) | |||
|---|---|---|---|---|
| 5% | 10% | 15% | 20% | |
| Petrolina | 80.93 | 44.83 | 29.00 | 19.37 |
| Serra Talhada | 51.53 | 36.97 | 32.30 | 27.70 |
| São João | 99.80 | 78.20 | 62.20 | 52.10 |
| Campina Grande | 31.57 | 23.33 | 12.67 | 9.60 |
| Cajueiro 1 | 37.40 | 25.55 | 13.70 | 22.55 |
| Cajueiro 2 | 53.37 | 31.53 | 17.80 | 21.90 |
| Mata Seca | 65.00 | 48.00 | 37.00 | 26.00 |
| Mean | 59.94 | 41.20 | 29.24 | 25.60 |
Mean absolute error (MAE) of the end of season estimates varying the values of the estimate and seasonal amplitudes in TIMESAT.
3.3 Caatinga leafing patterns from MODIS long-term time series
The transition dates for the start of the season, end of the season, and the NDVI peak of the 20 growing seasons (2000–2019) were seasonal for all seven sites, as indicated by the significance of the Rayleigh test (Z) (Supplementary Table S4). In general, the SD for both TDs and the NDVI peak was lower as the precipitation increased (Figures 5E–F), indicating that the interannual variability in leaf flushing and fall and in the time of the maximum photosynthetic activity decreased toward moist sites. Additionally, the concentration around the mean vector (µ) for these phenophases was low for the driest sites (Figures 5A–C) but increased as the site’s precipitation increased (Figures 5E, F), indicating that the TDs are more concentrated around the mean in the moister sites, which is a characteristic of lower interannual variability. On the other hand, the patterns for the TDs at the SJO site (Figure 5D), which has the highest precipitation among the sites, contrasted with the abovestated result, showing the highest SD and lowest concentration around the mean vector for both TDs and for the time of the NDVI peak.
FIGURE 5

Circular histograms of transition dates - TDs representing the Start of Season and the End of Season (SOS and EOS) for the Caatinga sites calculated from MODIS time series from 2000 to 2019. The mean vector (µ) ± SD (standard deviation) for the SOS and EOS is shown in green and brown, respectively. The peak is shown in purple. r = concentration around the mean vector. DOY represents the mean angle converted to day of the year.
The LOS measured with the long-term MODIS time series did not differ on average (F = 1.95; p = 0.07) across the Caatinga sites (Figure 6A) but presented high interannual variability in the driest sites (PET, CGA, STA, and SJO) (PET, CGA, and STA) when compared to the wettest sites (CAJ 1, CAJ 2 and MSC) (Figure 6B), with exception of SJO. This pattern for the LOS confirmed the trend of increasing variability in the LOS for arid sites observed with phenocamera data (Table 3) and added information on the interannual LOS variability for the less arid sites.
FIGURE 6

Interannual variability of lenght of the season (LOS) for the Caatinga sites calculated from MODIS time series from 2000 to 2019. (A) Mean ± SD and (B) distribution of LOS across sites.
3.4 Caatinga land surface greening patterns from MODIS: long-term time series and environmental drivers
The land surface long-term (from 2000 to 2019) evaluation of the length of the growing season across sites was influenced by the accumulated precipitation but not by water deficit, soil moisture, and minimum and maximum temperatures (Figure 7). The productivity measured as the accumulated NDVI and peak NDVI were influenced by the accumulated precipitation and minimum and maximum temperatures (Figure 7). Thus, a positive relationship was observed between productivity and accumulated precipitation and minimum and maximum temperatures, with increases in productivity when these environmental variables increased (Figure 7).
FIGURE 7

Effects of the environmental factors accumulated precipitation, water deficit, soil moisture, and minimum and maximum temperatures on the land surface phenological parameter length of the growing season and the productivity parameters of accumulated NDVI and peak NDVI across the Caatinga sites. Data are long-term land surface NDVI greening extracted from MODIS time series from 2000 to 2019.
4 Discussion
4.1 Seasonal phenological patterns and differences between methods
The GCC and NDVI patterns for all seven sites indicated that the leafing patterns of vegetation were markedly seasonal, a result observed for other seasonally dry ecosystems (Rankine et al., 2017; Yan et al., 2019; Paloschi et al., 2020). The high interannual variability in the LOS registered using phenocams in the driest sites suggests that plants in these communities adjust their phenology to cope with the rainfall unpredictability characteristic of the driest areas in the Caatinga region (
The peak of GCC always preceded the peak of NDVI for all sites and growing seasons, and this delay may represent two different aspects of the canopy activity. The peak of canopy greenness is sensitive to the changes in the leaf color, representing how green the canopy is, which is influenced by the young leaves being produced (
In general, we observed better agreement between the phenocamera- and satellite-derived SOS than for the EOS transition dates. The leaf flushing in the Caatinga SDTF occurs fast and synchronously after the first rains of the rainy season (
The lower agreement in EOS and the late EOS for the NDVI in comparison to the phenocamera GCC may be caused by the more gradual rate of change of VI from the satellite during leaf fall in comparison to the phenocamera (
When the calibrated amplitude threshold of 5% for the calculations of the SOS was used, the error between the phenocamera- and satellite-derived SOS was reduced in around 5 days in relation to the 20% threshold, which may not be a significant reduction. However, for the calculation of the EOS phenophase, the usage of the 20% calibrated threshold expressively reduced the error in around 34 days in relation to the 10% threshold. The 20% amplitude threshold for calculating the SOS and EOS transition dates is a common method applied in LSP (Streher et al., 2017;
4.2 Land surface phenological variability across sites and its environmental drivers
The leaf production (SOS) calculated for 20 growing seasons of the NDVI time series from 2000 to 2019 demonstrated, as expected, an increase in the interannual variability towards most arid sites across the Caatinga. The increase in rainfall variability as the total rainfall decreases is a typical characteristic of the Caatinga region, resulting in the unpredictability of rainfall onset and in the mean annual rainfall in these areas across the years (Sampaio, 1995;
We expected an increase in the length of the growing season with the increase in the mean annual rainfall; however, the LOS did not differ on average across the sites. Also, the land surface parameter length of the growing season (LOS) increased toward the increase in accumulated precipitation, considering the data of all sites and the 20 growing seasons together. Other climatic variables evaluated, such as water deficit, soil moisture, and minimum and maximum temperatures, did not influence the LOS. On the other hand, the interannual variability in LOS was expressively higher with the increase in aridity. These results indicate that although the LOS did not differ across sites, they were adjusted from year to year through the changes in the timings of leaf flush and fall, probably as a response to rainfall variations. The high interannual variability of rainy season duration is likely to favor the coexistence of multiple drought-deciduous strategies inside plant communities, such as evergreen and different levels of deciduousness (Vico et al., 2015).
We measured accumulated and peak NDVI as proxies for ecosystem productivity and found a direct relationship between these variables and water availability (positive relation with accumulated precipitation and soil moisture and negative relation with water deficit). Our results suggest that the Caatinga productivity increases toward the moistest sites and/or when the total annual rainfall is higher. Gross primary productivity (GPP) and evapotranspiration (ET) of Caatinga have demonstrated strong dependency on water availability, being constrained mostly to the rainy season (
Extreme rainfall events have been observed in the Caatinga region as a consequence of climatic phenomena such as El Niño (
5 Conclusion
The phenocamera data successfully improved the accuracy of phenological metrics estimated from satellites, but it was more relevant for the leaf fall (EOS) period than for the leaf flushing (SOS) period. The long-term calibrated satellite phenological measurements unravel the leaf phenological patterns of the Caatinga sites across a large spatial scale. We showed that although all sites share the same semi-arid climate, the phenology of plant communities may be adapted to the changes in local aridity and the predictability of water availability. Aridity shapes land surface phenology across sites, resulting in no differences in averages but increasing the interannual variability in leaf out, fall, and length of the growing season. Additionally, the mean annual rainfall was a good predictor of the growing season length within and across the Caatinga sites.
Statements
Data availability statement
The raw data supporting the conclusion of this article will be made available by the authors, without undue reservation.
Author contributions
DR: conceptualization, data curation, formal analysis, investigation, methodology, visualization, writing–original draft, and writing–review and editing. JA: conceptualization, data curation, formal analysis, investigation, methodology, validation, visualization, writing–original draft, and writing–review and editing. BA: conceptualization, data curation, formal analysis, investigation, methodology, visualization, writing–original draft, and writing–review and editing. MM:data curation, funding acquisition, investigation, project administration, and writing–original draft. TD: funding acquisition, project administration, resources, supervision, writing–original draft, and writing–review and editing. NN: data curation, formal analysis, and writing–original draft. JL: data curation, investigation, and writing–review and editing. RS: data curation, investigation, and writing–review and editing. ES: data curation, investigation, project administration, and writing–review and editing. JS: data curation, investigation, and writing–review and editing. ME-S: data curation, investigation, project administration, and writing–review and editing. LM: conceptualization, data curation, funding acquisition, investigation, project administration, resources, supervision, writing–original draft, and writing–review and editing. JC: conceptualization, data curation, formal analysis, funding acquisition, investigation, methodology, project administration, supervision, visualization, writing–original draft, and writing–review and editing.
Funding
The authors declare financial support was received for the research, authorship, and/or publication of this article. This research was funded by the São Paulo Research Foundation FAPESP (grants FAPESP-NERC #2015/50488-5 and FAPESP-Microsoft Research Institute #2013/50155-0, #2009/54208-6, #2019/11835-2, #2021/10639-5, and #2022/07735-5), the National Council for Scientific and Technological Development—CNPq (grants #483223/2011-5 and #409341/2021-5), and FACEPE (Caatinga-FLUX Project, grant APQ 0062-1.07/15). DR and BA received fellowships from FAPESP [(#2017/17380-1) and (#2014/00215-0 and #2016/01413-5), respectively]. LM received research productivity fellowships and grants from CNPq (#311820/2018-2 and #401577/2022-8).
Acknowledgments
The authors thank the Unidade Acadêmica de Serra Talhada (UAST) and Unidade Acadêmica de Garanhuns (UAG) from Universidade Federal Rural de Pernambuco (UFRPE) and the National Observatory of Water and Carbon Dynamics in the Caatinga Biome (NOWCDCB) for allowing the use of academic installations and providing technical assistance and the Instituto Estadual de Florestas de Minas Gerais (IEF-MG) for the support in the Parque Estadual Lagoa do Cajueiro and Parque Estadual da Mata Seca. They also thank Embrapa Semiárido for all the support and collaboration in the Caatinga-FLUX site at Petrolina, Joabe Almeida and Cidney Bezerra for technical support during fieldwork, and Valdemir Silva for support with camera installation.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Publisher’s note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
Supplementary material
The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fenvs.2023.1275844/full#supplementary-material
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Summary
Keywords
PhenoCam images, Caatinga, sensor MODIS, times series analysis, land surface phenology
Citation
Ramos DM, Andrade JM, Alberton BC, Moura MSB, Domingues TF, Neves N, Lima JRS, Souza R, Souza E, Silva JR, Espírito-Santo MM, Morellato LPC and Cunha J (2023) Multiscale phenology of seasonally dry tropical forests in an aridity gradient. Front. Environ. Sci. 11:1275844. doi: 10.3389/fenvs.2023.1275844
Received
10 August 2023
Accepted
16 November 2023
Published
18 December 2023
Volume
11 - 2023
Edited by
Dominika Dąbrowska, University of Silesia in Katowice, Poland
Reviewed by
Eleinis Ávila-Lovera, The University of Utah, United States
Jorge Cortés-Flores, National Autonomous University of Mexico, Mexico
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Copyright
© 2023 Ramos, Andrade, Alberton, Moura, Domingues, Neves, Lima, Souza, Souza, Silva, Espírito-Santo, Morellato and Cunha.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Desirée M. Ramos, desibio@gmail.com; Leonor Patrícia Cerdeira Morellato, patricia.morellato@unesp.br
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