Exploring the gut microbiota-Parkinson’s disease link: preliminary insights from metagenomics and Mendelian randomization

in Systems Microbiology

• Jiaji Liu
• Le Wang
• Ling Su
• Jiayi Chen
• Ruijun Su

Multi-cohort metagenomics reveals strain functional heterogeneity and demonstrates fecal microbial load correction improves colorectal cancer diagnostic models

in Systems Microbiology

• Qiucheng Li
• Fang Liu
• Jianfeng Zhong
• Xiaoling Fang
• Xinyi Zhang
• Huizhen Xiong
• Guangyi Li
• Honglei Chen

Enhancing pathogen identification through AI-assisted metagenomic sequencing

in Systems Microbiology

• Xiayu Peng
• Yong Wei
• Xue Zhou

Taxonomic and functional profiling of the vulvar microbiome indicates variations related to ecological signatures, aging, and health status

in Systems Microbiology

• Arnout Mieremet
• Michelle van der Wurff
• Lisa Pagan
• Edgar Ferrer-González
• Jin Seo
• Frank H. J. Schuren

Preliminary exploration of the ability of HUC-MSCs to restore the lung microbiota and related metabolite disorders in IPF treatment: combining 16S sequencing and metabolite analysis

in Systems Microbiology

• Shuang Zhou
• Yukai Luo
• Jun Liu
• Jishui Huang
• Xiaojing Zhang
• Qing-chun Jia
• Yijian Lin
• Zhenyong Huang
• Yiming Zeng
• Wenzhao Cheng

Structure-guided integrative soft deep clustering analysis of scRNA-seq and scATAC-seq data

in Systems Microbiology

• Jiang Xingzuo
• Wang Chenyuan
• Yao Jiaxi
• Wang Chengyuan

Bibliometric analysis of the application of artificial intelligence techniques in bacteriology: a PRISMA-guided research agenda

in Systems Microbiology

• Diana Carolina Velasco Cardona
• Sebastián Cardona-Acevedo
• Alejandro Valencia-Arias
• Orlando Pérez-Delgado
• Melissa Pinella Vega

Computational microbiome pharmacology analysis elucidates the anti-cancer potential of vaginal microbes and metabolites

in Systems Microbiology

• Damilola C. Lawore
• Smrutiti Jena
• Alicia R. Berard
• Kenzie Birse
• Alana Lamont
• Romel D. Mackelprang
• Laura Noel-Romas
• Michelle Perner
• Xuanlin Hou
• Elizabeth Irungu

The human microbiome in clinical translation: from bench to bedside

in Systems Microbiology

• Jhommara Bautista
• Carolina E. Echeverría
• Iván Maldonado-Noboa
• Sofía Ojeda-Mosquera
• Camila Hidalgo-Tinoco
• Andrés López-Cortés

Retraction: The variation of nasal microbiota caused by low levels of gaseous ammonia exposure in growing pigs

in Systems Microbiology

TIE-UP-SIN: a novel method for enhanced identification of protein–protein interactions

in Systems Microbiology

• Maximilian Schedlowski
• Stephan Michalik
• Tilly Hoffmüller
• Marco Harms
• Leif Steil
• Kristin Surmann
• Christian Hentschker
• Manuela Gesell Salazar
• Uwe Völker
• Alexander Reder

Exploring the phylogenetic diversity and antimicrobial activity of non-aureus staphylococci and mammaliicocci isolated from teat apices of organic dairy cows

in Systems Microbiology

• F. Peña-Mosca
• T. N. Gaire
• C. Dean
• P. Ferm
• D. Manriquez
• P. Pinedo
• N. Noyes
• L. Caixeta

Characterization of Streptococcus mitis subsp. carlssonii isolated from human vagina: prevalence, phenotypic, and genomic insights

in Systems Microbiology

• Jake Adolf V. Montecillo
• Jung Hwa Lee
• Heon Jong Yoo
• Yoo-Young Lee
• Chul Min Park
• Angela Cho
• Hyunsu Lee
• Jong Mi Kim
• Nan Young Lee
• Sun-Hyun Park

The gut microbiome in lung cancer: from pathogenesis to precision therapy

in Systems Microbiology

• Miao Shi
• Long-Fei Wang
• Wen-Tao Hu
• Zhi-Gang Liang

Measurement quality metrics to improve absolute microbial cell counting

in Systems Microbiology

• Kirsten Parratt
• David Newton
• Joy Dunkers
• Jennifer Dootz
• Monique Hunter
• Alshae' Logan-Jackson
• Laura Pierce
• Sumona Sarkar
• Stephanie L. Servetas
• Nancy J. Lin

Exploring vaginal microbiome: from traditional methods to metagenomic next-generation sequencing—a systematic review

in Systems Microbiology

• Siying Liu
• Yuxin Chen
• Kunxiu Zhang
• Dan Tang
• Ji Zhang
• Yuxin Wang
• Jiaqi Zhao
• Diyan Li
• Tao Wang

Global research trends on the relationship between gut microbiota and melanoma from 2014 to 2023: a bibliometric and visualization analysis

in Systems Microbiology

• Sai Liu
• Kewang Hu
• Mingli Zhu

Can deep learning technology really recognize Mpox? A positive response from the EfficientNet model

in Systems Microbiology

• Xiaoqian Zhao
• Long Lyu
• Li Zhang

Trichoderma diversity from karst area in Yunnan, Shilin, and four new species

in Systems Microbiology

• Xing-Wen Dai
• Xian-Kun Zhang
• Xiao-Hui Li
• Qian-Qian Li
• Feng Zhang
• Min Qiao
• Ming-He Mo
• Ying Huang
• Ze-Fen Yu

Correction: Skin microbiota and diabetic foot ulcers

in Systems Microbiology

• Jiaqi Lou
• Ziyi Xiang
• Xiaoyu Zhu
• Jiliang Li
• Guoying Jin
• Shengyong Cui
• Neng Huang
• Xin Le
• Youfen Fan
• Qionghui Sun

Comparative evaluation of sequencing platforms: Pacific Biosciences, Oxford Nanopore Technologies, and Illumina for 16S rRNA-based soil microbiome profiling

in Systems Microbiology

• Vladimir Veselovsky
• Mikhail Romanov
• Polina Zoruk
• Andrey Larin
• Vladislav Babenko
• Maxim Morozov
• Aleksandra Strokach
• Natalia Zakharevich
• Sadokatkhon Khamidova
• Albina Danilova

The effect of topical antibiotic or antibiotic-corticosteroid treatment on the ocular surface microbiota of healthy horses

in Systems Microbiology

• M. G. Martin de Bustamante
• C. E. Plummer
• B. Caddey
• D. E. Gomez

Vaginal bacteria and cervical cancer: a bibliometric analysis of trends and themes

in Systems Microbiology

• Xiaoxia Liu
• Yinghui Zhao
• Xianhua Meng
• Zheng Gao
• Xiaohong Wang
• Fengyong Yang

Microbiome and metabolome integrated analysis: exploring potential diagnostic approaches for Parkinson’s disease using tongue coating samples

in Systems Microbiology

• Runjuan Yang
• Mengqi Jia
• Ying Xu
• Zhenghua Wu
• Dongying Wu
• Yaxing Gui