Infectious disease control in the microbial functional genomics era

5,716
Total downloads
23k
Total views and downloads

Articles

ORIGINAL RESEARCH

Published on 06 Aug 2025

Phylogenomic analysis of OXA-23-positive and genetic context of rare NDM-1-producing carbapenem-resistant Acinetobacter baumannii isolates in a teaching hospital in China

Su Dong
Jianjiang Lou
Caiping Mao
Yuejuan Fang
Huan Zhang

doi 10.3389/fmicb.2025.1575257

407 views

ORIGINAL RESEARCH

Published on 29 Jul 2025

Genomic profiling of cefotaxime-resistant Haemophilus influenzae from Norway and Sweden reveals extensive expansion of virulent multidrug-resistant international clones

Dagfinn Skaare
Inger Lill Anthonisen
Nermin Zecic
Andrew Jenkins
Dominique A. Caugant
Trond Egil Ranheim
Arnfinn Sundsfjord
Kristin Hegstad
Study Group on Exceptional Phenotypes in Haemophilus influenzae
19 more
Sandra Åsheim

doi 10.3389/fmicb.2025.1601390

1,353 views

ORIGINAL RESEARCH

Accepted on 28 Jul 2025

Characterization and Immunoprotective Efficacy of a Fumarate reductase FrdA Mutant of Salmonella Enteritidis

Siping Zhu
Xinyi Sun
Hong Li
Yongmei Su
Chihuan Li
Xintong Zhu
Chao Ren
Xiaochen Liu
Yulai Dong
1 more
Zhiqiang Zhang

doi 10.3389/fmicb.2025.1626276

132 views

ORIGINAL RESEARCH

Published on 19 Jun 2025

Impact of sample multiplexing on detection of bacteria and antimicrobial resistance genes in pig microbiomes using long-read sequencing

Mirena Ivanova
Frank M. Aarestrup
Saria Otani

doi 10.3389/fmicb.2025.1597804

1,536 views

ORIGINAL RESEARCH

Published on 13 Jun 2025

Methicillin-resistant Staphylococcus aureus in Saudi Arabia: genomic evidence of recent clonal expansion and plasmid-driven resistance dissemination

Ahmed Yousef Alhejaili
Ge Zhou
Heba Halawa
Jiayi Huang
Omniya Fallatah
Raneem Hirayban
Sara Iftikhar
Abrar AlAsmari
Mathew Milner
16 more
Waleed Al Salem

doi 10.3389/fmicb.2025.1602985

2,162 views

ORIGINAL RESEARCH

Published on 06 Jun 2025

The diverse virulence potential of atypical enteropathogenic Escherichia coli isolated from diarrhea: the emergence of a hybrid pathotype?

Ana C. M. Santos
Roberta S. Silva
Mônica A. M. Vieira
Cristina V. Niero
Matheus S. F. Ribeiro
Beatriz E. C. Guth
Tânia A. T. Gomes
Rosa M. Silva

doi 10.3389/fmicb.2025.1599350

1,626 views

ORIGINAL RESEARCH

Published on 15 May 2025

The wzc mutation mediates virulence changes in K1-type Klebsiella pneumoniae within the same patient

Gaoqin Teng
Qiuying Qin
Shuo Ding
Yanchao Wu
Yingying Fu
Meng Zhang
Xiaoqiang Yang
Ye Jin
Zhijiang Xu
Man Huang

doi 10.3389/fmicb.2025.1577629

1,838 views

ORIGINAL RESEARCH

Published on 07 May 2025

Whole genome sequencing reveals virulence–mobile element linkages and phylogenetic diversity in multidrug-resistant Escherichia coli from Nigeria

Nubwa Medugu
Mabel Kamweli Aworh
Kenneth Iregbu
Philip Nwajiobi-Princewill
Dawn M. Hull
Lyndy Harden
Pallavi Singh
Stephen Obaro
Abiodun Egwuenu
5 more
Siddhartha Thakur

doi 10.3389/fmicb.2025.1579175

2,370 views

ORIGINAL RESEARCH

Published on 01 May 2025

Application of metagenomic next-generation sequencing in pathogen detection of lung infections

Song Chen
Tanglin Ouyang
Kaiyang Wang
Xuan Hou
Rong Zhang
Meiyong Li
Haibin Zhang
Qinghua He
Xiuzhen Li
2 more
Bo Huang

doi 10.3389/fcimb.2025.1513603

1,576 views

ORIGINAL RESEARCH

Published on 16 Apr 2025

The application prospect of metagenomic next-generation sequencing technology in diagnosing suspected lower respiratory tract infections

Wei Li
Mingming Zhao
Weiwei Wu
Gang Chen
Yanping Hang
Haixia Zheng
Zhenyun Gao
Jia Liu
Yuguo Zhao

doi 10.3389/fcimb.2025.1494638

1,350 views

ORIGINAL RESEARCH

Published on 01 Apr 2025

Identifying phage Lysins through genomic analysis of prophages from Acinetobacter baumannii

Maria Leonor Raposo
Ana Carolina Pimentel
Vera Manageiro
Aida Duarte
Manuela Caniça
Filipa F. Vale

doi 10.3389/fmicb.2025.1532950

1,637 views
1 citation

ORIGINAL RESEARCH

Published on 05 Mar 2025

HPV integration profiling using nanopore sequencing and association with cervical precancerous lesion

Ying Hou
Shoufeng Ni
Xin Liu
Xingyu Liu
Nan Wang
Fuqiang Xu
Jianyong Gao
Yanmei Li
Yuxiang Zhou
5 more
Qing Liu

doi 10.3389/fmicb.2025.1522550

1,511 views

Share on

Frontiers in Microbiology

Systems Microbiology
Antimicrobials, Resistance and Chemotherapy
Infectious Agents and Disease

Impact

23kTopic views
17kArticle views
5,716Article downloads

View impact

Articles

Phylogenomic analysis of OXA-23-positive and genetic context of rare NDM-1-producing carbapenem-resistant Acinetobacter baumannii isolates in a teaching hospital in China

Genomic profiling of cefotaxime-resistant Haemophilus influenzae from Norway and Sweden reveals extensive expansion of virulent multidrug-resistant international clones

Characterization and Immunoprotective Efficacy of a Fumarate reductase FrdA Mutant of Salmonella Enteritidis

Impact of sample multiplexing on detection of bacteria and antimicrobial resistance genes in pig microbiomes using long-read sequencing

Methicillin-resistant Staphylococcus aureus in Saudi Arabia: genomic evidence of recent clonal expansion and plasmid-driven resistance dissemination

The diverse virulence potential of atypical enteropathogenic Escherichia coli isolated from diarrhea: the emergence of a hybrid pathotype?

The wzc mutation mediates virulence changes in K1-type Klebsiella pneumoniae within the same patient

Whole genome sequencing reveals virulence–mobile element linkages and phylogenetic diversity in multidrug-resistant Escherichia coli from Nigeria

Application of metagenomic next-generation sequencing in pathogen detection of lung infections

The application prospect of metagenomic next-generation sequencing technology in diagnosing suspected lower respiratory tract infections

Identifying phage Lysins through genomic analysis of prophages from Acinetobacter baumannii

HPV integration profiling using nanopore sequencing and association with cervical precancerous lesion

Frontiers in Microbiology

Systems Microbiology

Antimicrobials, Resistance and Chemotherapy

Infectious Agents and Disease