Abstract
The aminomethyl (•CH2NH2) radical is generated from the photo-oxidation of methylamine in the troposphere and is an important precursor for new particle formation. The effect of ammonia and water on the gas-phase formation of methanimine (CH2NH) from the •CH2NH2 + O2 reaction is not known. Therefore, in this study, the potential energy surfaces for •CH2NH2 + O2 (+NH3/H2O) were constructed using ab initio//DFT, i.e., coupled-cluster theory (CCSD(T))//hybrid-density functional theory, i.e., M06-2X with the 6-311++G (3df, 3pd) basis set. The Rice−Ramsperger−Kassel−Marcus (RRKM)/master equation (ME) simulation with Eckart’s asymmetric tunneling was used to calculate the rate coefficients and branching fractions relevant to the troposphere. The results show 40% formation of CH2NH at the low-pressure (<1 bar) and 100% formation of CH2NH2OO• at the high-pressure limit (HPL) condition. When an ammonia molecule is introduced into the reaction, there is a slight increase in the formation of CH2NH; however, when a water molecule is introduced into the reaction, the increase in the formation of CH2NH was from 40% to ∼80%. The calculated rate coefficient for •CH2NH2 + O2 (+NH3) [1.9 × 10−23 cm3 molecule−1 s−1] and for CH2NH2 + O2 (+H2O) [3.3 × 10-17 cm3 molecule-1 s-1] is at least twelve and six order magnitudes smaller than those for free •CH2NH2 + O2 (2 × 10−11 cm3 molecule−1 s−1 at 298 K) reactions, respectively. Our result is consistent with that of previous experimental and theoretical analysis and in good agreement with its isoelectronic analogous reaction. The work also provides a clear understanding of the formation of tropospheric carcinogenic compounds, i.e., hydrogen cyanide (HCN).
1 Introduction
Methylamine is a simple organic nitrogen compound that is released into the atmosphere from a range of sources, for example, food industries, animal husbandry, marine sources, and biomass burning (Schade and Crutzen, 1995; ; ; Zhang et al., 2012; ). Methylamine forms a particulate salt when reacting with acids such as H2SO4, HNO, and CH3COOH; therefore, it plays a vital role in enhancing atmospheric cloud nucleation (; ). The reaction of methylamine with various tropospheric oxidants such as O3, OH, and NO3 radicals leads to the formation of semi-volatile and non-volatile chemical species, consequently leading to the formation of secondary organic aerosols (Schade and Crutzen, 1995; ; ; ; ). Methylamine is also expected to be present in the interstellar medium (ISM), which leads to the formation of amino acids (; ; ). Although glycine (HO2CCH2NH2) has not yet been identified in the ISM medium, it is detected in different comets (; ). Methylamines are also possible atmospheric precursors of hydrogen cyanide and nitrous oxide (N2O) (). N2O is a greenhouse gas and the potential source of stratospheric NOx production. To know the significance of methylamine reactions in the two drastically different environments, several researchers have investigated their atmospheric significance and sinks in both the gas phase and solid phase (Schade and Crutzen, 1995; ; ; ).
Once CH3NH2 is released into the Earth’s atmosphere, it reacts with the OH radical via the H-abstraction reaction, leading to the formation of a carbon-centered aminomethyl (•CH2NH2) radical, which is observed as a major product, and nitrogen-centered methyl amino radical (CH3NH•), which is observed as a minor product (Figure 1) (; ; ; ).
FIGURE 1
As suggested in the previous studies (
Concerning the gas-phase reactivity of •CH2NH2 toward O2 in the role of ammonia and water, several studies in the past few years have proposed the role of different species such as H2O, NH3, formic acid, and CO2 on important atmospheric reactions (Vöhringer-Martinez et al., 2007;
Water vapor is an environmentally significant constituent of the Earth’s atmosphere. Numerous investigations have been carried out to determine the catalytic role of a single H2O molecule in many atmospheric and combustion reaction systems (Vöhringer-Martinez et al., 2007;
In this paper, we have investigated the rate coefficients for the effect of NH3 and H2O molecules on the important atmospheric and combustion prototype reactions, i.e., •CH2NH2 + O2, for the first time. Using the RRKM/ME simulation, the temperature- and pressure-dependent rate coefficients were calculated between 200 K and 400 K and pressure ranges of 0.0001–1000 atm. The role of enthalpy and entropy contributions on hydrogen-bonded species on the effect of ammonia and water on the •CH2NH2 + O2 reaction has been discussed to understand the chemical kinetic behavior of these complexes. In these situations, we have been inspired to model a gas-phase ternary reaction system, •CH2NH2 ···O2···X (X = NH3, H2O), where H2O and NH3 can act as catalysts (vide Infra). To assess the accuracy of the data provided in this work, we have compared the energies and re-calculated rate coefficients and compared them with the available literature data for •CH2NH2 + O2 and its isoelectronic similar reaction, i.e., •CH2OH + O2 (
2 Theoretical and computational methodology
2.1 Quantum chemical calculations
All the electronic structure calculations were carried out with the Gaussian 09 suite of programs (
2.2 State-of-the-art kinetics calculations
All the kinetics calculations were carried out using a software tool in the MultiWell suite of the program (
To avoid repetition from the previous studies, the details of each term of the equation are given in Supplementary Material S1. To calculate temperature- and pressure-dependent rate coefficients and branching fractions, N2 bath gases were used with an approximate value of the energy transfer process <ΔE > down = 200 × (T/300)0.85 cm−1 (
The pressure-dependent total rate coefficients for •CH2NH2 + O2 were calculated using (
where () is the quantum mechanical tunneling correction to the microcanonical rate coefficients k(E). was implemented in the MultiWell master equation code, which is based on the 1-D Eckart asymmetric barrier. The k(E) calculated using the modified sums of states of the transition state reflect the tunneling effects. Tunneling was used to initialize the chemical activation distribution if both the “CHEMACT” and “TUN” keywords were selected. The is the branching fraction (f) of the reaction going back to the reactants, and is a high-pressure limit rate coefficient. The fall-off behavior of rate coefficients from (pressure = 1000 bar, P→∞) toward the low-pressure limit (p = 0.0001 bar, P→0) was considered.
For the barrierless reactions, i.e., •CH2NH2 + O2→ CH2NH2OO, •CH2NH2 … H2O + O2→ CH2NH2OO … H2O, •CH2NH2 … NH3+O2→•CH2NH2OO … NH3, the inverse Laplace transform (ILT) method was used. Since the rate coefficients for association reactions are usually weak and dependent on temperature, the activation energy for the recombination reaction was assumed to be equal to 0. As suggested in many similar reactions (
The equilibrium constant (Keq) for the formation of •CH2NH2 + O2→ CH2NH2OO•, •CH2NH2 … H2O→CH2NH2OO … H2O, •CH2NH2 … NH3→•CH2NH2OO … NH3,•CH2NH2 … H2O + O2→CH2NH2OO … H2O and •CH2NH2 … NH3+O2→•CH2NH2OO … NH3 was calculated using the “THERMO” code as given: (
The equilibrium constants () for the formation of two-body and three-body complexes calculated by Eq. 3 are tabulated in Supplementary Tables S3, S4. The and are total partition functions of the intermediates and reactants, respectively; is the zero-point corrected energy difference between intermediates and reactants. The calculated rate coefficients in the high-pressure limit () were fitted to the modified Arrhenius expression in the temperature range of 200 K–400 K.
3 Results and discussion
3.1 Geometries and Energies
3.1.1 Reaction channels for •CH2NH2 + O2
The optimized structures of intermediates and transition states are shown in Figure 2. The zero-point corrected PES for the •CH2NH2 + O2 reaction is depicted in Figure 3, and enthalpies values are given in Table 1. In the current reaction system, the O2 molecule attacks the radical carbon atom, which leads to the formation of the intermediate •OO-CH2NH2 (INT1). Several conformational isomers of INT1 were observed, and for simplicity, we have considered the lowest energy conformer in our calculation. The calculated stabilization energy for INT1 is −31.7 kcal mol-1, which is in very good agreement with the reported values by
FIGURE 2

Structural and geometrical changes during the •CH2NH2 + O2 reaction calculated using M06-2X/6-311++G (3df, 3pd).
FIGURE 3

Potential energy surface for the •CH2NH2 + O2 reaction obtained using CCSD(T)/6-311++G (3df, 3pd)//M06-2X/6-311++G (3df, 3pd). The energies shown in the figure include the zero-point energy.
TABLE 1
| •CH2NH2 + O2 → | This Work | Previous works. | •CH2OH + O2 → | Previous Work ( | ∆Sr,298K |
|---|---|---|---|---|---|
| H2NCH2OO (INT1) | −31.7 | −33.3a,-32.5b | HOCH2OO (Int-1) | −31.9 | −37.3 |
| H···NHCH2OO (TS1) | 4.4 | 2.5a | H···OCH2OO (TS-1) | −7.4 | −39.6 |
| HO2···CH2NH (TS2) | 5.4 | 2.7a | HO2···CH2O (TS-2) | 2.8 | −36.2 |
| H···CHNH2OO (TS3) | 9.3 | 6.2a | HO···HCOOH (TS-3) | 8.6 | −38.0 |
| HO···OCH2NH (TS4) | 15.7 | 12.4a | HO···OCH2O (TS-4) | 24.0 | −35.3 |
| H···NHCH2···OO (TS5) | −9.8 | −10.2a,-12.0b | H···O2··CH2O (TS-5) | −18.5 | −38.9 |
| H···NHCHO···OH (TS6) | 25.3 | 21.8a | - | - | −35.9 |
| HO···OCH2NH (QOOH) | −14.8 | −16.1a | HO···OCH2O | −14.2 | −37.6 |
| OOH···NHCH2 (INT2) | −21.4 | −22.8a,22.0b | OOH···OCH2 (Int-2) | −25.6 | −29.2 |
| HO···NH2CHO (INT3) | −78.9 | −77.2a | - | - | −29.3 |
| CH2NH + HO2 | −10.9 | −12.2a,-10.6b | CH2O+ HO2 | −17.9 | 1.8 |
| NH2CHO + OH | −73.4 | −73.1a | −2.0 | ||
| OCH2NH + OH | −2.7 | −2.9a | OCH2O+ OH | −15.0 | −5.5 |
Comparison of enthalpies (in kcal mol-1) of each species for the •CH2NH2 + O2 reaction with those found in previous studies and its isoelectronic analogs.
The other reaction channel, such as the conversion from QOOH to INT3 via H-atom shift (C to N) through a three-membered transition state, TS6 (41 kcal mol−1), is expected to have a negligible impact on the total rate coefficient due to its high energy barriers.
The enthalpies of reaction (ΔHrxn (0 K) for •CH2NH2 + O2 → CH2NH + •HO2 (−10.9 kcal mol-1) are in very good agreement with those found in the most accurate active thermochemical database (ATcT) (−11.42 kcal mol-1) (Ruscic et al., 2004; Ruscic and Bross, 2020) and in good agreement with the theoretically calculated value in
3.1.2 Role of the ammonia molecule on •CH2NH2 + O2
When a single ammonia molecule is introduced in •CH2NH2 + O2, the simultaneous collision between •CH2NH2, O2, and NH3 is very unlikely to occur; therefore, the probability of a trimolecular reaction is very small under real conditions. Hence, the first step is the formation of a CH2NH2···NH3 complex, followed by collision with O2. The CH2NH2···NH3 complex (−2.2 kcal/mol) is assumed to be more important than CH2NH2···O2 and NH3···O2 due to its lower binding energy (<1 kcal/mol). As discussed in our previous work, we have also used a similar approach for ammonia-assisted reactions (
FIGURE 4

Structural and geometrical changes for the ammonia-assisted •CH2NH2 + O2 reaction calculated using M06-2X/6–311++G (3df, 3pd).
FIGURE 5

Potential energy surface for the role of ammonia on the •CH2NH2 + O2 reaction obtained using CCSD(T)/6-311++G (3df, 3pd)//M06-2X/6-311++G (3df, 3pd). The energies shown in the figure include the zero-point energy.
TABLE 2
| •CH2NH2 + O2 (+NH3) → | ∆Hrxn (0 K) | ∆Srxn (298 K) |
|---|---|---|
| CH2NH2···NH3 | −2.2 | −28.2 |
| H2NCH2OO···NH3 (INT1n) | −36.1 | −66.3 |
| H···NHCH2OO···NH3 (TS1n) | 1.9 | −68.9 |
| HO2···CH2NH···NH3 (TS2n) | −5.6 | −70.4 |
| H···CHNH2OO···NH3 (TS3n) | 2.5 | −70.9 |
| HO···OCH2NH···NH3 (TS4n) | 9.7 | −66.7 |
| H···NHCH2···OO···NH3 (TS5n) | −10.0 | −68.6 |
| H···NHCHO···OH···NH3 (TS6n) | 24.2 | −66.5 |
| H···NHCH2···OO···NH3 (TS7n) | −12.1 | −69.6 |
| HO···OCH2NH···NH3 (QOOH-n) | −23.2 | −68.8 |
| OOH···NHCH2···NH3 (INT2n) | −25.5 | −55.5 |
| HO···NH2CHO (INT3n) | −86.3 | −61.2 |
Enthalpies (in kcal mol-1) and entropies (in cal K−1 mol-1) due to the effect of NH3 on each species involved for the •CH2NH2 + O2 reaction.
Figure 5 shows that the effect of the ammonia reaction proceeds via similar reaction pathways as a free reaction. For simplicity, only the most stable structures are shown in the PES. As shown in Figure 5, O2 attacks the bimolecular complex •CH2NH2···NH3 to form a trimolecular hydrogen-bonded complex (INT1n) (Figure 4), whose stabilization energy is −36.1 kcal mol-1. The resulting ammonia-assisted intermediate (INT1n) is 4.4 kcal mol-1 more stable than the corresponding ammonia-free intermediate, i.e., INT1. This is due to the formation of strong hydrogen bonds between the terminal O-atom of H2NCH2OO and one of the H-atoms of NH3 (2.20 Å) and the H-atom of H2NCH2OO (2.08 Å) with the N-atom of NH3, whereas no such effect is observed in INT1. On the other hand, Table 2 shows that INT1 is entropically more favorable than INT1n with respect to reactants. This is due to the fact that the hydrogen-bonded complex decreases the entropy of the system. Similar to uncatalyzed reaction pathways, the terminal O-atom intra-molecularly attacks the H-atoms in the NH2 group in the presence of NH3, leading to the formation of INT2n and QOOH-n via five-membered cyclic transition states (TS5n/TS7n and TS1n, respectively). The difference in the barrier heights between two isomeric transition states, TS5n and TS7n, is 2.1 kcal mol-1. TS5n seems to be more stable than TS7n because, in the case of TS5n, all three hydrogen atoms of ammonia face toward the molecular center, leading to the formation of a six-membered ring hydrogen-bonded cyclic structure, whereas in the case of TS7n, hydrogen atoms of ammonia are away from the molecular center, leading to the formation of a similar six-membered ring hydrogen-bonded cyclic structure. Entropy data also support that TS5n is more disordered than TS7n.
Supplementary Figure S2 provides an IRC scan at the same level that confirms that TS5n bridges the OCH2C(O)OOH radical (INT2n) and CH2NH + HO2 +NH3. The IRC scan confirms that the only stationary point between INT2h and the trimolecular products is that associated. The barrier height of TS1n is 2.5 kcal mol-1 lower than that of the corresponding ammonia-free transition state TS1. This is due to the formation of two strong hydrogen bonds (H-atoms of ammonia with N and O atoms of the cyclic ring) in TS1n (1.93 and 2.14 Å). On the other hand, the barrier height of TS5n is almost similar to that of TS5, although hydrogen bonds are present in TS5n. The differences in the barrier height can be explained by the formation of two adjacent cyclic ring structures (five- and six-membered), as aforementioned in TS5n, making it sterically hindered compared to only one ring structure in TS5. The stabilization energies of ammonia-assisted QOOH and INT2 are calculated to be −23.3 and −25.5 kcal mol-1, respectively, which are 8.4 and 4.1 kcal mol-1 lower than those of the corresponding free-ammonia structures. This can be explained similarly by comparing the presence of hydrogen bonds in the respective structures. In QOOH-n, the formation of two strong hydrogen bonds between the H-atom of ammonia with N atom QOOH (2.26 Å) and N atom NH3 and terminal H atom of QOOH (1.76 Å) leads to a seven-membered ring-like structure rather than only one hydrogen bond in the case of free QOOH. Similarly, the stability of INT2n can be explained by the formation of an eight-membered ring with three hydrogen bonds, H of HO2 and N of CH2NH (1.64 Å), O of HO2 and N of NH3 (2.1 Å), and H of CH2NH and N of NH3 (2.24 Å) compared to a six-membered ring with two hydrogen bonds in the case of INT2. On the other hand, the structures of QOOH-n and INT2n are entropically less favorable compared to those of uncatalyzed QOOH and INT2n.
QOOH-n further dissociates to INT2n (via TS2n) and INT3n (via TS6n) and then subsequently forms HO2+CH2NH + NH3 and OH + OCH2NH + NH3 via TS4n and OH + NH2CHO + NH3. INT2n and INT3n are eight-membered ring hydrogen-bonded structures, and their stabilization energies are 4.1 kcal mol-1 and 7.4 of kcal mol-1 lower than those of the corresponding uncatalyzed intermediates. Ammonia-assisted intermediates are more stable than ammonia-free ones because of the formation of an eight-membered ring structure with three strong hydrogen bonds between HO2···NH3 (2.1 Å), NH3···CH2NH (2.24 Å), and HO2···CH2NH (1.64 Å) in INT2n and OH···NH3 (2.04 Å), NH3···NH2CHO (1.87 Å), and HO···NH2CHO (1.72 Å) in INT3n. The barrier heights of TS2n (−5.6 kcal mol-1), TS3n (2.5 kcal mol-1), TS4n (9.7 kcal mol-1), and TS6n (24.2 kcal mol-1) were also consistently lower than those of the corresponding ammonia-free transition states due to similar hydrogen bonding interactions. Overall, the reaction in the presence of an ammonia-assisted intermediate is thermodynamically more favorable than the free reaction, and vice versa entropically.
3.1.3 Role of the water molecule on •CH2NH2 + O2
As previously discussed in the case of ammonia reactions, we have also employed a similar approach for water reactions. When a single H2O molecule is added to •CH2NH2 + O2, the first step is the formation of a CH2NH2···H2O complex, followed by collision with O2. The CH2NH2···H2O (-2.7 kcal/mol) is assumed to be more important than CH2NH2···O2 and H2O···O2 (<1 kcal/mol) due to lower binding energy. The geometrical changes in water-assisted intermediates and transition states are shown in Figure 6 and the Cartesian coordinates of all the optimized geometries are given in Supplementary Table S1.
FIGURE 6

Optimized structures of water-assisted intermediates and transition states were obtained using M06-2X/6-311++G (3df, 3pd).
The zero-point-corrected PES for the water-assisted •CH2NH2 + O2 reaction is given in Figure 7, and the energy of all the stationary points, i.e., reactants, INTs, and TSs, is tabulated in Table 3. As shown in Figure 6 and Figure 7, the O2 molecule attacks the bimolecular complex •CH2NH2···H2O to form a trimolecular hydrogen-bonded complex (INT1h) with a stabilization energy of −36.1 kcal mol-1. The INT1h is 4.4 kcal mol-1 lower than that of the water-free intermediate (INT1) and identical to the energy of ammonia-assisted INT1n. The result indicates water- and ammonia-assisted reactions are energetically more favorable than free reactions.
FIGURE 7

Potential energy surface for the role of water on the •CH2NH2 + O2 reaction obtained using CCSD(T)/6-311++G (3df, 3pd)//M06-2X/6-311++G (3df, 3pd). The energies shown in the figure include the zero-point correction.
TABLE 3
| •CH2NH2 + O2 (+H2O) → | ∆Hrxn (0 K) | ∆Srxn (298 K) |
|---|---|---|
| CH2NH2···H2O | −2.7 | −27.9 |
| H2NCH2OO··· H2O (INT1h) | −36.1 | −70.3 |
| H···NHCH2OO··· H2O (TS1h) | 1.5 | −71.7 |
| HO2···CH2NH···NH3 (TS2h) | −5.0 | −71.5 |
| H···CHNH2OO···NH3 (TS3h) | 2.0 | −72.0 |
| HO···OCH2NH···NH3 (TS4h) | 9.3 | −70.9 |
| H···NHCH2···OO···NH3 (TS5h) | −11.8 | −70.4 |
| H···NHCHO···OH···NH3 (TS6h) | 21.4 | −66.2 |
| HO···OCH2NH···NH3 (QOOH-h) | −22.3 | −71.4 |
| OOH···NHCH2···NH3 (INT2h) | −27.1 | −60.1 |
| HO···NH2CHO (INT3h) | −88.6 | −64.1 |
Enthalpies (in kcal mol-1) and entropies (in cal K−1 mol-1) due to the effect of H2O on each species involved for the •CH2NH2 + O2 reaction.
In INT1h, two strong hydrogen bonds are observed between the terminal O-atom of H2NCH2OO and one of the H-atoms of H2O (1.91 Å) and O-atom H2O and terminal H-atom H2NCH2OO (2.12 Å) (see Figure 6). On the other hand, Table 3 and Table 1 show that INT1h is entropically least favored than INT1n and INT1. Similar to the free reaction, the terminal O-atom of INT1h intra-molecularly attacks the H-atoms in the NH2 group, leading to the formation of cyclic structures, i.e., INT2h and QOOH-h, via five-membered cyclic transition states, i.e., TS5h and TS1h, respectively. The barrier heights of TS5h and TS1h are 2 kcal mol-1 and 3 kcal mol-1 lower than those of water-free transition states TS5 and TS1, respectively. In a similar manner, TS5h and TS1h are 1.8 kcal mol-1 and 0.4 kcal mol-1 lower than TS5n and TS1n, respectively. These differences in barrier heights indicate that water-assisted transition states are energetically more stable than ammonia-assisted and water-free species. The stabilization energies of water-assisted QOOH-h and INT2h are calculated to be −22.3 kcal mol-1 and −27.1 kcal mol-1, which are 7.8 kcal mol-1 and 5.7 kcal mol-1 lower than those of the corresponding free structures. This can be understood by comparing the presence of hydrogen bonds in the respective structures. Supplementary Figure S3 provides an IRC scan at the same level that confirms TS5h bridges the OCH2C(O)OOH radical (INT2h) and CH2NH + H2O + HO2 products. The IRC scan confirms that the only stationary point between INT2h and the trimolecular products is that associated. In QOOH-h, the formation of two strong hydrogen bonds between the H-atom of water with the N atom of QOOH (1.95 Å) and the O atom of H2O and the terminal H atom of QOOH (1.82 Å) led to the formation of a seven-membered ring-like structure. Similarly, the stability of INT2h can be found by the formation of an eight-membered cyclic ring with three hydrogen bonds, H of HO2 and N of CH2NH (1.65 Å), O of HO2 and H of H2O (1.87 Å), and H of CH2NH and O of H2O (2.13 Å), which are compared to that of a six-membered ring with two hydrogen bonds, as indicated in the case of INT2. Between water- and ammonia-catalyzed QOOH and INT2, QOOH-n is more stable than QOOH-h and INT2h is more stable than INT2n.
In general, the water-free pathways are entropically more favorable than water-free ones. The QOOH further dissociates to INT2h (via TS2h) and INT3h (via TS6h) and then subsequently forms HO2+ CH2NH + H2O, OH + OCH2NH + H2O via TS4h, and OH + NH2CHO + H2O. In general, the water-assisted reaction channels are thermodynamically more favorable and entropically less favorable than the free reaction. It is also clear from Table 3 that all other pathways are thermodynamically less important compared to R + O2→INT1h→TS5h→INT2h→ CH2NH + HO2+H2O, whose barrier height is the lowest with respect to reactants. Therefore, the other reaction channels may have less contribution under tropospheric conditions.
3.2 Kinetics
3.2.1 Rate coefficients for the •CH2NH2 + O2 reaction
To obtain the rate coefficients for •CH2NH2 + O2 in temperatures between 200 K and 400 K and pressures from 0.000001 bar to 1000 bar, the RRKM/ME simulation has been used. The rate coefficients as a function of the temperature at 1 bar pressure are shown in Figure 8. The rate coefficients for the formation of O2-CH2NH and CH2NH are observed to be pressure-dependent and negative temperature-dependent. This result is consistent with that of the previous reports by
FIGURE 8

Rate coefficients for the •CH2NH2 +O2 reaction at 1 bar pressure.
Figure 9 reports the rate coefficients in the fall-off regions for the •CH2NH2 + O2 reaction at different temperatures. The rate coefficients increase as pressure increases, and the HPL condition is observed at ∼100 bar. As shown in Figure 9, the largest difference between the two limits occurs at about 250 K, which reaches a factor of 2. However, at 200 K, the difference between the two regimes is about a factor of 2. To provide more detailed insights, the relative branching fractions of these channels were determined at 200 K, 300 K, and 400 K and shown in Supplementary Figure S4. For simplicity, the branching fraction at different pressures and at 300 K is shown in Figure 10. At all temperatures and pressures, the branching fractions of QOOH are almost negligible; therefore, they are not shown in Figure 10. The branching fraction for the formation CH2NH/HO2 contributes 40% at 300 K and increases as temperature increases to 400 K. The formation of CH2NH decreases to 0% as pressure increases to 100 bar. At the same time, the formation of CH2NH2OO increases as pressure increases to 100 bar (100%). The plot shows that backward reaction to regenerate reactants is prominent at <0.01 bar. These results are also consistent with the previously reported branching ratio by
FIGURE 9

Total rate coefficients as a function in the fall-off regions for the •CH2NH2 +O2 reaction.
FIGURE 10

Pressure-dependent branching fractions for the •CH2NH + O2 reaction at 300 K.
3.2.2 Rate coefficients for •CH2NH2+O2 (+NH3)
As discussed in the previous section, only the entry channel •CH2NH ···NH3 + O2 is considered for the rate coefficient calculations.
The equation to calculate the effective pressure-dependent rate coefficients is as follows:
where and are equilibrium constants of each pathway involved in a reaction, [NH3] is the concentration, and f is the branching fraction for the reaction proceeding to the reactant. The ammonia concentration used at 10 ppbv is based on the observations from previous studies (
TABLE 4
| Temperature | •CH2NH2 + O2 | Exp. value | 32CH2OH + O2 | •CH2NH2+O2 (+NH3) | •CH2NH2 +O2 (+H2O) |
|---|---|---|---|---|---|
| 200 | 3.9 × 10−11 | 1.9 × 10−11 | 5.6 × 10−11 | 1.9 × 10−22 | 9.8 × 10−20 |
| 225 | 3.1 × 10−11 | 2.2 × 10−11 | 4.6 × 10−11 | 8.6 × 10−23 | 7.8 × 10−19 |
| 250 | 2.4 × 10−11 | 2.4 × 10−11 | 3.8 × 10−11 | 4.8 × 10−23 | 3.7 × 10−18 |
| 275 | 2.0 × 10−11 | 2.7 × 10−11 | 3.3 × 10−11 | 3.0 × 10−23 | 1.3 × 10−17 |
| 298 | 1.7 × 10−11 | 2.9 × 10−11 | 2.8 × 10−11 | 1.9 × 10−23 | 3.3 × 10−17 |
| 300 | 1.6 × 10−11 | 2.8 × 10−11 | 2.85 × 10−11 | 1.9 × 10−23 | 3.3 × 10−17 |
| 325 | 1.4 × 10−11 | 3.1 × 10−11 | 2.6 × 10−11 | 1.4 × 10−23 | 7.4 × 10−17 |
| 350 | 1.2 × 10−11 | 3.4 × 10−11 | 2.3 × 10−11 | 1.1 × 10−23 | 1.4 × 10−16 |
| 375 | 0.9 × 10−11 | 3.6 × 10−11 | 2.1 × 10−11 | 8.7 × 10−24 | 2.3 × 10−16 |
| 400 | 0.8 × 10−11 | 3.8 × 10−11 | 1.9 × 10−11 | 7.4 × 10−24 | 4.0 × 10−16 |
| k = ATn | A = 0.02 | A = 1.0 × 10−09 | A = 4.8 × 10−31 | A = 3.5×105 | |
| n = −3.4 | n = −0.75 | n = 2.0 | n = −6.0 | ||
| exp (−B/T) | B = 323 | B = −222 | B = −1858 | B = 4958 |
Calculated rate coefficients for the •CH2NH2 + O2, •CH2NH2 +O2 (+NH3), and •CH2NH2 +O2 (+H2O) in the temperature range of 200 K–400 K at 1 bar pressure.
The relative branching fractions of these channels determined at 200 K, 300 K, and 400 K are shown in Supplementary Figure S5. For simplicity, the branching fraction at 300 K is shown in Figure 11. The branching fraction for the formation of CH2NH/HO2 contributes 50% at 300 K, and almost the same temperature increases to 400 K (see Supplementary Figure S5). At the same time, the formation of CH2NH2OO … NH3 increases as the pressure increases to 100 bar (100%). The plot shows the back-reaction that regenerates •CH2NH2 … NH3 + O2. When the results are compared with those of the free reaction, it is easier to lose HO2 via the formation of CH2NH than through OH loss via formamide formation. We can say that the effect of ammonia has a negligible impact on the product branching ratios, and the results are almost similar to those of a free reaction, except at very low pressure (Supplementary Figure S5).
FIGURE 11

Pressure-dependent branching fractions for the •CH2NH2 … NH3 +O2 reaction at 300 K.
3.2.3 Rate constant for •CH2NH2 + O2 (+H2O)
The scheme for the formation of INT1h, CH2NH, and HO2 from •CH2NH2 + O2 reactions with the effect of a water can be written as follows.
The equation to calculate the effective pressure-dependent rate coefficients is as follows:
where and are the equilibrium constants of each reaction pathway involved in equation (iii), [H2O] is the concentration, and f is the branching fraction for the reaction proceeding to the reactants. The [H2O] is calculated using a typical humidity concentration, as discussed in the previous paper (
Our calculation shows that the total effective rate coefficients for systems •CH2NH2 + O2 (+NH3) (∼10–11 order) and •CH2NH2 + O2 (+H2O) (6 order) are smaller than that of the free reaction (see Figure 12).
FIGURE 12

Comparison between rate coefficients for •CH2NH2 + O2, •CH2NH2 + O2 (+NH3), and •CH2NH2 + O2 (+H2O) in the temperature range of 200 K–400 K at 1 bar pressure.
It is clear that the geometries of INT and TSs are different in •CH2NH2 + O2 (+NH3) reaction systems compared to their isoelectronic analogous •CH2NH2 + O2 (+H2O) reactions, resulting in different computed enthalpies and rate coefficients. Because of this, the kinetics of •CH2NH2 + O2 (+NH3) is quite different from those of •CH2NH2 + O2 (+H2O) reaction systems. In the case of free reactions and ammonia, the rate coefficients exhibit negative temperature dependence, whereas in the case of water, positive temperature dependence was observed. This may be due to the fact that water concentration is highly dependent on temperature, and ammonia concentration is nearly independent of temperature. The branching fractions for the formation of •OOCH2NH2 and •CH2NH and the reaction going back to •CH2NH2 + O2 with the effect of a single water molecule at 300 K and pressure range 0.001 bar–1000 bar are shown in Figure 13, and a comparison of branching fractions for •CH2NH2 + O2, •CH2NH2 + O2 (+NH3), and •CH2NH2 + O2 (+H2O) at 200 K, 300 K, and 400 K is shown in Supplementary Figure S7.
FIGURE 13

Pressure-dependent branching fractions for the •CH2NH2 … H2O+ O2 reaction at 300 K.
As previously discussed in water- and ammonia-free reactions, the product branching ratios for the formation of CH2NH + HO2 decrease, and the reaction goes back to the reactants, i.e., •CH2NH2 + O2, when the pressure increases from 0.1 bar. When a water molecule is added to the reaction, the product branching ratio changes significantly (∼80%), and a single water reaction favors the formation of CH2NH + HO2 at a temperature of <300 K; however, the effect of ammonia favors only ∼10%. Despite the slower water reaction, our ME calculations indicate that a favorable CH2NH + HO2 formation is observed under tropospheric conditions.
3.3 Atmospheric fate of methylamine and methanimine
The atmospheric degradation of CH3NH2 with and without ammonia and water molecules is shown in Figure 14. The atmospheric lifetime () because of its interaction with OH and species •CH2NH2 with O2 radicals is calculated as follows:
FIGURE 14

Atmospheric degradation reaction of CH3NH2 with and without ammonia/water molecules.
The average OH radical concentration at tropospheric conditions 225 K and <1 bar is ∼1 × 106 cm3 molecule−1 s-1, and a concentration of [O2] = 1 × 1016 molecules cm-3 was used, which is based on a previous study (
To understand the impact of INT1 in budget calculations, we have calculated the atmospheric lifetime of ∼3 microseconds of •CH2NH2 with its reaction O2, indicating that the formation of CH2NH is fast under tropospheric conditions (i.e., at 225 K and an altitude of ∼10–11 km) when taking an average concentration of O2 radicals in the upper troposphere of ∼1 × 1016 molecule cm-3. It is of interest to know whether HO2···CH2NH2···H2O can be produced from the reaction of CH2NH···H2O + O2 reaction under atmospheric conditions. For this purpose, we calculated the pseudo-first-order rate coefficients of decay of •CH2NH2···H2O+ O2 at 300 K using concentration [O2] = 1 × 1016 molecules cm-3. The decay rate of INT2h producing CH2NH2+H2O-HO2 was found to be 8 × 10−3 s-1, which led to the 2 min of the lifetime of HO2···CH2NH2···H2O. Therefore, we can say that under tropospheric conditions, HO2···CH2NH2···H2O can be produced from the reaction of •CH2NH2 + O2 (+H2O).
To understand the fate of the CH3NH• radical with its reaction with O2 under the PES (see Supplementary Figure S8), rate coefficients for the addition of O2 to CH3NH• are investigated using the RRKM/ME simulation. The O2 radical mildly reacts with CH3NH• with the ∼6 kcal/mol below the reactants. Unlike the formation of common aminoperoxy radicals, O2 addition to CH3NH• proceeds with a transition state TS1a with ∼5 kcal/mol of barriers, leading to the formation of Int2 and dissected to Int-2 via a five-membered ring transition state with the barrier height of ∼13 kcal/mol (with respect to Int-ad) and dissociated with barrierless process to CH2NH + HO2. We predicted the rate coefficients using the direct reaction, i.e., CH3NH• + O2→TS2a→CH2NH + HO2 (Supplementary Figure S8, in blue), and the indirect reaction, i.e., CH3NH• + O2 →TS1a→CH3NHOO→TS2a→Int2→CH2NH + HO2 (Supplementary Figure S8, in black). The calculated rate coefficient for the direct formation of CH2NH + HO2 is 7 × 10−16 cm3 molecule−1 s-1, which is at least two orders of magnitude smaller than the indirect reaction. Based on our ME calculation, we can say that the formation of CH2NH does not come from the CH3NH• +O2 reaction because the reaction is quite slow under tropospheric conditions.
The mechanistic and kinetic analysis suggests the formation of these two •CH2NH2 and CH3NH•, and our overall understanding of atmospheric and interstellar oxygen chemistry remained uncertain. Although many experimental and computational efforts over the past decade on reaction rate coefficients and branching ratios have been made, our knowledge of the chemical pathways theorized for the O2 reaction in two different environments is not clear. Therefore, as suggested in a previous study, at a low temperature, i.e., <100 K, the formation of CH3NH• is dominated over the formation of •CH2NH2 under an interstellar cold medium (
There has been considerable speculation about what will happen after the formation of CH2NH (
FIGURE 15

Atmospheric degradation of CH2NH with various possible atmospheric species.
4 Conclusion
In this work, the rate coefficients and branching fraction for •CH2NH2 + O2, •CH2NH2 + O2 (+H2O), and •CH2NH2 + O2 (+NH3) for the formation of methanimine (CH2NH) and HO2 have been investigated using CCSD(T)//M06-2X/6-311++G (3df, 3pd) coupled with the RRKM/ME simulation. The results show that •CH2NH2 + O2 leads to the formation of CH2NH at temperatures <300 K and goes back to reactants (•CH2OH + O2) at high temperatures (>300 K). When the water/ammonia molecule is added to the •CH2NH2 + O2 reaction, it favors the formation of CH2NH at a temperature <300 K. The NH3- and H2O- assisted rate coefficients are at least 1010–1012 (
Statements
Data availability statement
The original contributions presented in the study are included in the article/Supplementary Material; further inquiries can be directed to the corresponding author.
Author contributions
MD and MA completed all the electronic structure calculations, and MA completed the chemical kinetic calculations. MD and MA prepared the draft of the manuscript. All authors contributed to the article and approved the submitted version.
Funding
The work is supported by the faculty startup grant # 8474000461 at Khalifa University Abu Dhabi UAE.
Acknowledgments
MA thanks the Department of Chemistry at College of Art and Science at Khalifa University of Science and Technology, Abu Dhabi UAE, to carry out the research. MA thanks the supercomputer facility computational support at Khalifa University of Science and Technology, at Abu Dhabi, UAE. The authors thank reviewers for their valuable suggestions.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Publisher’s note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
Supplementary material
The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fchem.2023.1243235/full#supplementary-material
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Summary
Keywords
aminomethyl radical, O2 radical, methanimine, ab initio/DFT, RRKM/ME, H2O and NH3, HCN, catalysis
Citation
Dash MR and Ali MA (2023) Can a single ammonia and water molecule enhance the formation of methanimine under tropospheric conditions?: kinetics of •CH2NH2 + O2 (+NH3/H2O). Front. Chem. 11:1243235. doi: 10.3389/fchem.2023.1243235
Received
20 June 2023
Accepted
01 September 2023
Published
21 September 2023
Volume
11 - 2023
Edited by
Jose Luis Cabellos, Polytechnic University of Tapachula, Mexico
Reviewed by
Andrea Maranzana, University of Turin, Italy
Ana María Mendoza Wilson, Centro de Investigacion en Alimentacion y Desarrollo A.C., Mexico
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© 2023 Dash and Ali.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Mohamad Akbar Ali, akbar.mohamad@ku.ac.ae
Disclaimer
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.