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SYSTEMATIC REVIEW article

Front. Nutr.

Sec. Nutrition and Microbes

Volume 12 - 2025 | doi: 10.3389/fnut.2025.1650633

This article is part of the Research TopicHealth Benefits and Risks of Fermented Foods – The PIMENTO InitiativeView all 10 articles

A scoping review on the health effects of fermented foods in specific human populations and potential use of fermented foods in precision nutrition: knowledge and gaps

Provisionally accepted
  • 1Institut de recherche pour le developpement, Marseille, France
  • 2Aristoteleio Panepistemio Thessalonikes, Thessaloniki, Greece
  • 3Universidade Lusófona,, lisboa, Portugal
  • 4Instituto Universitario Egas Moniz Centro de Investigacao Interdisciplinar Egas Moniz, Caparica, Portugal
  • 5University of Novi Sad, Institute of Food Technology, Novi Sad, Serbia
  • 6Yuksek Ihtisas Universitesi, Ankara, Türkiye
  • 7Institut national de recherche pour l'agriculture l'alimentation et l'environnement, Paris, France
  • 8UMR Fromages, Aurillac, France
  • 9KU Leuven, VIB-Center of Microbiology, Leuven, Belgium
  • 10Hitit Universitesi, Çorum, Türkiye
  • 11Ege Universitesi, Izmir, Türkiye
  • 12Instituto Mediterraneo para a Agricultura Ambiente e Desenvolvimento, Evora, Portugal
  • 13Universidade Lusófona, Lisboa, Portugal
  • 14Univerzitet u Beogradu Institut za bioloska istrazivanja Sinisa Stankovic, Belgrade, Serbia
  • 15AS TFTAK, Tallinn, Estonia
  • 16Microbiologie de l'Alimentation au Service de la Sante, Jouy-en-Josas, France
  • 17Univerza v Ljubljani, Ljubljana, Slovenia
  • 18Agroscope, Bern, Switzerland
  • 19Institut National de recherche pour l’agriculture, l’alimentation et l’environnement (INRAE), Paris, France
  • 20Unite de Nutrition Humaine, Saint-Genès-Champanelle, France

The final, formatted version of the article will be published soon.

Background: Diets and specific foods affect health, and inter-individual response to nutritional factors are observed. This uman variability can be considered as a basis for developing personalised/precision nutrition. Fermented foods (FF) contain a wide range of macro- and micronutrients, bioactive compounds and a source of live or dead microorganisms. FF represent a large variety of products and have received significant interest for their potential health benefits. However, consistent evidence remains limited, possibly due to heterogeneity in individual responses. Objectives: The objective of the review is to assess and compile existing evidence of variable response of populations to FF and consequently whether FF could be integrated in a precision nutrition strategy. Design: Interventional and observational human studies were collected systematically. The publication identified the main factors likely to contribute to a variable response to FF across all health outcomes. The question was systematically addressed to assess the available evidence and identify knowledge gaps to focus future research. A pragmatic approach was the use of EFSA health claim guidelines, which requires an assessment of the food characteristics and of the mechanisms of action, in addition to the systematic search of human interventional studies. A similar approach was used for the analysis of the data extracted from the observational studies. Population included all human (healthy, non-healthy, all ages) observational and interventional studies. Intervention consisted on the ingestion of any FF. Control was the absence or a lower consumption of FF, or a corresponding non-FF. Outcome included all markers of the population’s health status. Results: The main factors contributing to the variable response to FF across all health outcomes were related to the initial phenotypic characteristics (biological sex, geographical origin, hormonal status, age), health status at baseline (metabolic syndrome (MetS), chronic metabolic pathologies, cancer, psychological disorders) and genetic background. Additionally, as gut microbiota is person-specific, and a factor determining variable metabolic response, a particular focus was given to the functions of gut microbiota and their role in the variability of population responses to FF. Conclusion: Collectively, this review represents a first step towards evaluating the feasibility of using FF in tailored nutritional strategies.

Keywords: fermented food, Coffee, metabolic syndrome, Gut Microbiota, Population variability, Personalised nutrition, Yogurt

Received: 20 Jun 2025; Accepted: 30 Sep 2025.

Copyright: © 2025 Humblot, Alvanoudi, Alves, Assunção, Belović, Bulmus Tuccar, Chassard, Derrien, KARAGÖZ, Karakaya, Laranjo, MANTZOURIDOU, Rosado, Praćer, Saar, Tap, Treven, Vergères, Pertziger and Savary-Auzeloux. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Isabelle Savary-Auzeloux, isabelle.savary-auzeloux@inrae.fr

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