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ORIGINAL RESEARCH article

Front. Plant Sci.
Sec. Plant Metabolism and Chemodiversity
Volume 15 - 2024 | doi: 10.3389/fpls.2024.1379299

Mass Spectrometry Imaging of Arabidopsis thaliana with in vivo D2O Labeling

Provisionally accepted
  • Iowa State University, Ames, Iowa, United States

The final, formatted version of the article will be published soon.

    Commonly used analytical tools for metabolomics cannot directly probe metabolic activities or distinguish metabolite differences between cells and sub-organs in multicellular organisms. These issues can be addressed by in vivo isotope labeling and mass spectrometry imaging (MSI), respectively, but the combination of the two, a newly emerging technology we call MSIi, has been rarely applied to plant systems. In this study, we explored MSIi of Arabidopsis thaliana with D2O labeling to study and visualize D-labeling in three classes of lipids: arabidopsides, chloroplast lipids, and epicuticular wax. Similar to other stress response, D2O induced stress increased arabidopsides in an hour but it was relatively minor for matured plants and reverted to normal level in a few hours. The D-labeling isotopologue patterns of arabidopsides were matching with those of galactolipid precursors, supporting the currently accepted biosynthesis mechanism. Matrix-assisted laser desorption/ionization (MALDI)-MSI was used to visualize the spatiotemporal distribution of deuterated chloroplast lipids, pheophytin a, MGDGs, and DGDGs, after growing day-after-sowing (DAS) 28 plants in D2O condition for 3-12 days. There was a gradual change of deuteration amount along the leaf tissues and with a longer labeling time, which was attributed to slow respiration leading to low D2O concentration at the tissues. Finally, the deuterium incorporation in epicuticular wax was visualized on the surfaces of stem and flower. The conversion efficiency of newly synthesized C30 aldehyde to C29 ketone was very low in the lower stem but very high at the top of stem near the flower or on the flower carpel. This study successfully demonstrated that MSIi can unveil spatiotemporal metabolic activities in various tissues of A. thaliana.

    Keywords: Arabidopsis thaliana, in vivo isotope labeling, Mass spectrometry imaging, matrixassisted laser desorption/ionization, Arabidopsides, Chloroplast lipids, Epicuticular wax

    Received: 30 Jan 2024; Accepted: 10 May 2024.

    Copyright: © 2024 Na and Lee. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Young Jin Lee, Iowa State University, Ames, 50011, Iowa, United States

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.