Automated seed counting using image processing and deep learning

Qiuyu Zu¹Teng Liu²Wenpeng Zhu²Yan Pan²Jinxu Wang²Xinru Song²Jialin Yu²Shu Dang¹Xiaoming Yu¹Zhenyu Zhang^1*

• ¹Jilin Agricultural Science and Technology University, Jilin, China
• ²Peking University Institute of Advanced Agricultural Sciences, Weifang, China

Introduction: Accurate seed counting is an essential task in agricultural research and farming, supporting activities such as crop breeding, yield prediction, and weed management. Traditional manual seed counting, while accurate, is time-consuming, labor-intensive, and prone to human error, particularly for large quantities of micro-sized seeds. Methods: This study developed two automated computer vision approaches integrated into a mobile application (app) for seed counting: one utilizing image processing (IP) and the other based on deep learning (DL). These methods aim to address the limitations of traditional manual counting by providing automated, efficient alternatives. Results: The IP-based method demonstrated high accuracy comparable to manual counting and offered substantial time savings. However, its reliance on controlled environmental conditions, such as uniform lighting, limits its versatility for field apps. The DL-based method excelled in speed and scalability, processing counts in as little as 0.33 seconds per image, but its accuracy was inconsistent for visually complex or densely clustered seeds. Discussion: Both automated methods significantly enhance the efficiency of seed counting, providing a practical and accessible solution for various agricultural contexts. The integration of these methods into a mobile app streamlines seed counting for laboratory research, field studies, seed production, and breeding trials, offering a transformative approach to modernizing seed counting practices while reducing time and labor requirements.