CORRECTION article

Front. Plant Sci., 07 November 2017

Sec. Plant Biotechnology

Volume 8 - 2017 | https://doi.org/10.3389/fpls.2017.01964

Corrigendum: Transcriptome Analysis of Maize Immature Embryos Reveals the Roles of Cysteine in Improving Agrobacterium Infection Efficiency

  • 1. College of Agronomy and Biotechnology, China Agricultural University, Beijing, China

  • 2. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China

In the original article, there was a mistake in Table 3 as published. In original Table 3, four aquaporin genes (GRMZM2G041980, GRMZM2G392975, GRMZM2G126582, GRMZM2G081843) were repeated two times, and we neglected to include several upregulated glycosyltransferase genes (GRMZM2G120016, GRMZM5G834303). The corrected Table 3 appears below.

Table 3

PathwayGene IDGene anotationExpression pattern
GRMZM2G120016Cis-zeatin O-glucosyltransferaseUp-regulated
GRMZM5G834303Cytokinin-O-glucosyltransferase 2Up-regulated
Oxidation reduction processGRMZM2G052571Glutathione S-transferaseUp-regulated
GRMZM2G056388Glutathione S-transferaseUp-regulated
GRMZM2G036708Cysteine synthaseUp-regulated
GRMZM2G159587Glyoxylate reductaseUp-regulated
GRMZM2G170017Carbonyl reductase 1Up-regulated
GRMZM2G177077Glucose-6-phosphate 1-dehydrogenaseUp-regulated
GRMZM2G141473Aldehyde oxidase-2Up-regulated
GRMZM2G169890Superoxide dismutaseUp-regulated
GRMZM2G058522Superoxide dismutaseUp-regulated
GRMZM2G471357Peroxidase 52Up-regulated
GRMZM2G4402086-phosphogluconate dehydrogenaseUp-regulated
GRMZM2G173195Glycerol-3-phosphate dehydrogenaseUp-regulated
GRMZM2G090980Mannitol dehydrogenaseUp-regulated
GRMZM2G058244UDP-glucose 6-dehydrogenaseUp-regulated
GRMZM2G053720Proline oxidaseUp-regulated
GRMZM2G074743Alternative oxidaseUp-regulated
GRMZM2G479423Aldose reductaseUp-regulated
GRMZM2G443445Mannitol dehydrogenaseUp-regulated
GRMZM2G099467Gibberellin 20 oxidase 2Up-regulated
GRMZM2G072529Acc oxidaseUp-regulated
GRMZM2G102959Ferredoxin–nitrite reductaseUp-regulated
Membrane Integrity and transportGRMZM2G041980Aquaporin NIP1-1Down-regulated
GRMZM2G392975Aquaporin PIP1-1Down-regulated
GRMZM2G126582Aquaporin NIP-typeDown-regulated
GRMZM2G081843Aquaporin PIP 1-3Down-regulated
GRMZM2G027098Aquaporin TIP2-2Down-regulated
GRMZM2G047368Aquaporin PIP2-4Down-regulated
GRMZM2G178693Aquaporin PIP2-4Down-regulated
GRMZM2G154628Aquaporin PIP2-4Down-regulated
GRMZM2G060922Aquaporin SIP1-2Down-regulated
GRMZM2G159632Sulfate transporterDown-regulated
GRMZM2G442523Sugar transport protein 5Down-regulated
GRMZM2G063824Carbohydrate transporterDown-regulated
GRMZM2G342907Sulfate transporterDown-regulated
GRMZM2G036448Amino acid-polyamine transporterDown-regulated
Cell wall metabolismGRMZM2G166944xyloglucan endotransglucosylaseUp-regulated
GRMZM2G392125xyloglucan endotransglucosylaseUp-regulated
GRMZM2G070271probable xyloglucan endotransglucosylaseUp-regulated
GRMZM2G026980xyloglucan endotransglycosylaseUp-regulated
GRMZM2G070322systemin receptor SR160Up-regulated
GRMZM2G021621expansin-B4Down-regulated
GRMZM2G094990beta-expansin 1aDown-regulated
GRMZM2G414779expansin-A31-likeDown-regulated
GRMZM2G339122alpha expansin 1Down-regulated
GRMZM2G368886alpha expansin 4Down-regulated
GRMZM2G148485expansin-B15-likeDown-regulated
GRMZM2G082520beta-expansin 1aDown-regulated
GRMZM2G013002beta expansin 8Down-regulated
GRMZM2G342246beta-expansin 7Down-regulated
GRMZM2G021427expansin-B3-likeDown-regulated
GRMZM2G025231cellulose synthase 7Down-regulated
GRMZM2G178025endoglucanase 12-likeDown-regulated
GRMZM2G453565endoglucanase 2-likeDown-regulated
GRMZM2G147687exoglucanase 1Down-regulated
GRMZM2G141911endoglucanase 4-likeDown-regulated
GRMZM2G131912pectate lyase 8Down-regulated
GRMZM2G091191brassinosteroid-regulated protein BRU1-likeDown-regulated

DEGs which involved in the cell wall metabolism.

In the original article, there was an error. The reads from the HiII embryo samples were incorrectly presented as “7,432,161–15,904,122”. The correct reads from the HiII embryo samples should be “7,432,161–15,881,554” as shown in Table 1.

A correction has been made to (Results), (Maize Embryo Transcriptome Profiling), (Paragraph 1):

To investigate the mechanism of cysteine-related transformation efficiency improvement, we performed transcriptome analysis of the maize embryos cultured on the medium with or without cysteine. The experiment was performed with four independent biological replicates. We obtained 7,432,161–15,881,554 reads from the HiII embryo samples and more than 78.73% of the reads were mapped to the B73 reference genome. We obtained 20,119,176–24,789,278 reads from the inbred line Z31 embryo samples and 73.66% of the reads were mapped to the B73 reference genome (Table 1). Maize has ~ 30,000 genes and the sequencing depth we acquired was enough for subsequent analysis. The authors apologize for this error and state that this does not change the scientific conclusions of the article in any way.

Statements

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Summary

Keywords

Agrobacterium, infection efficiency, cysteine, maize embryo, transcriptome

Citation

Liu Y, Zhang Z, Fu J, Wang G, Wang J and Liu Y (2017) Corrigendum: Transcriptome Analysis of Maize Immature Embryos Reveals the Roles of Cysteine in Improving Agrobacterium Infection Efficiency. Front. Plant Sci. 8:1964. doi: 10.3389/fpls.2017.01964

Received

24 October 2017

Accepted

31 October 2017

Published

07 November 2017

Volume

8 - 2017

Edited and reviewed by

Paulo Arruda, Universidade Estadual de Campinas, Brazil

Updates

Copyright

*Correspondence: Jianhua Wang

This article was submitted to Plant Biotechnology, a section of the journal Frontiers in Plant Science

Disclaimer

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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