Abstract
Iron (Fe) is an essential nutrient for all living organisms but can lead to cytotoxicity when present in excess. Fe toxicity often occurs in rice grown in submerged paddy fields with low pH, leading dramatical increases in ferrous ion concentration, disrupting cell homeostasis and impairing growth and yield. However, the underlying molecular mechanisms of Fe toxicity response and tolerance in plants are not well characterized yet. Microarray and genome-wide association analyses have shown that rice employs four defense systems to regulate Fe homeostasis under Fe excess. In defense 1, Fe excess tolerance is implemented by Fe exclusion as a result of suppression of genes involved in Fe uptake and translocation such as OsIRT1, OsYSL2, OsTOM1, OsYSL15, OsNRAMP1, OsNAS1, OsNAS2, OsNAAT1, OsDMAS1, and OsIRO2. The Fe-binding ubiquitin ligase, HRZ, is a key regulator that represses Fe uptake genes in response to Fe excess in rice. In defense 2, rice retains Fe in the root system rather than transporting it to shoots. In defense 3, rice compartmentalizes Fe in the shoot. In defense 2 and 3, the vacuolar Fe transporter OsVIT2, Fe storage protein ferritin, and the nicotinamine synthase OsNAS3 mediate the isolation or detoxification of excess Fe. In defense 4, rice detoxifies the ROS produced within the plant body in response to excess Fe. Some OsWRKY transcription factors, S-nitrosoglutathione-reductase variants, p450-family proteins, and OsNAC4, 5, and 6 are implicated in defense 4. These knowledge will facilitate the breeding of tolerant crops with increased productivity in low-pH, Fe-excess soils.
Introduction
Iron Acquisition by Rice
Iron (Fe) is a transition metal essential for the survival of virtually all living organisms. In plants, Fe participates in several important metabolic processes such as photosynthesis, chloroplast development, chlorophyll biosynthesis, electron transport, and redox reactions (Marschner, 1995). Graminaceous plants, including rice, acquire Fe from soil by chelation (strategy II) method (Römheld and Marschner, 1986). Rice synthesizes the Fe chelator 2′-deoxymugineic acid (DMA), a phytosiderophore of the mugineic acid (MA) family (Takagi, 1976), and secretes it into to the rhizosphere via the MA transporter (TOM1) (Nozoye et al., 2011). The secreted DMAs chelate and solubilize insoluble Fe (III) in the rhizosphere to form Fe (III)-DMA complexes. These Fe complexes are taken up into root cells by yellow stripe 1 (YS1) and yellow stripe-like (YSL) transporters, OsYSL15 (; ). Rice is typically grown in submerged paddy field conditions, where highly soluble ferrous ion (Fe2+) is abundant. Under such conditions, unlike other gramineous plants, rice directly takes up ferrous ions via iron-regulated transporter 1 and 2 (OsIRT1 and OsIRT2) () together with phytosiderophores-based Fe uptake.
Iron Toxicity and its Damage to Rice Plants
The Fe2+ ions are abundant in paddy fields and absorption of them by rice roots causes severe Fe toxicity. The rhizosphere of acid sulfate soils with pH less than 5 contains the massive amount of Fe2+ about 10–2,000 mg kg−1 (). The Fe2+ ions are highly soluble in water (Ksp = [Fe2+] [OH-]2 = 8 × 10-16) compared to ferric ions (Fe3+) (Ksp = [Fe3+] [OH-]3 = 1 × 10-36) at 25°C (Stumm and Lee, 1961). Thus, Fe3+ ions merely dissolve in water (~1 × 10-9 mol L-1 at pH 5) while Fe2+ ions can dissolve proficiently (~800 mol L-1 at pH 5). Therefore, it states that all Fe2+ ions which exist in soil can be soluble in low pH (pH 5 or below). Among soil types, mainly acid sulfate soil, acid clay soil, and peat soil cause Fe toxicity (). Acid soils occupy approximately 3,950 million hectares or 30% of the total landmass, representing more than 50% of potentially arable land (von Uexküll and Mutert, 1995). Thus, Fe toxicity is one of the major determinants of crop yield and quality, particularly in China, India, and Southeast Asia (NRCS, 2005; Mahender et al., 2019), west and central Africa (), and Brazil ().
Iron overload in plants causes tissue damage and disrupts cellular homeostasis. The sequential effects of Fe toxicity in rice plants are shown in Figure 1. Ferrous toxicity inhibits cell division and elongation of the primary roots and subsequently the growth of lateral roots (). High Fe absorption by the roots and its transport into the leaves by xylem via the transpiration stream lead to cellular Fe overload in plant tissues ().
Figure 1
Free Fe ions caused by Fe overload has a high affinity to bind with oxygen, leading to high oxygen tension and excess Fe accumulation in plant tissues. In plants, the Fe solubility varies in different cellular compartments and their pH is one of the influential factors. For examples, in typical xylem sap at pH 5.5 (), the solubility of Fe3+ is ~3 ×10-10 mol L-1 and that of Fe2+ is ~80 mol L-1; in the apoplast at pH 6 (), the solubility of Fe3+ is ~1 × 10-12 mol L-1 and that of Fe2+ is ~8 mol L-1; in the cytosol at pH 8 (Martinière et al., 2013), the solubility of Fe3+ is 1 × 10-18 mol L-1 and that of Fe2+ is ~8 × 10-4 mol L-1. The Fe2+ ions can be oxidized to Fe3+ ions, and then those Fe3+ ions can readily be precipitated in most of the plant tissues where it becomes immobilized, less reactive, and thus less cellular toxicity. On the other hand, Fe2+ ions exist as a highly soluble and reactive form in the plant tissues with Fe overload and even numerous Fe2+ ions might exist as a free form in the cytosol if without any chelation or isolation, causing toxic reactions such as Fenton reaction. The Fenton reaction causes overproduction of reactive oxygen species (ROS), particularly the cytotoxic hydroxyl radical (•OH) (; Thongbai and Goodman, 2000). Plant Fe toxicity disturbs photosystem II and elevates the cytochrome b6/f content of thylakoids, lowering the photosynthetic rate and accelerating oxygen production (Suh et al., 2002). Fe overload in chloroplasts results in oxidative damage caused by ROS (). This leads to irreversible damage to cellular structures, membranes, DNA, and proteins (; Stein et al., 2009a). Fe excess in cells impairs biological processes and leads to bronzing symptoms on leaves as a result of cell death. Leaf bronzing induced by Fe toxicity is closely associated with yield loss (Wu et al., 2014).
In this review, we summarize recent progress in the physiological and molecular mechanisms of Fe toxicity in rice, as well as its strategies to maintain Fe homeostasis.
Physiological and Molecular Defense Mechanisms Against Fe Toxicity
Rice responds to Fe toxicity by means of four defense mechanisms (Defense 1, 2, 3 and 4). A model of the mechanisms of tolerance to excess Fe is shown in Figure 2.
Figure 2
Defense 1 (Fe Exclusion from Roots)
Under Fe excess condition, rice plants employ a defense mechanism of Fe exclusion, a root-based tolerant mechanism through inhibition of root Fe uptake. Rhizospheric oxidation of Fe2+ to Fe3+ by oxygen transport from shoots to roots leads to the formation of Fe plaques on the root surface due to Fe3+ precipitation, which acts as a barrier to the uptake of excess Fe2+ into root tissues (
Microarray analyses have indicated that the expression of Fe uptake- and transport-related genes, such as OsIRT1, OsIRT2, OsYSL2, OsYSL15, and OsNRAMP1, is highly suppressed in roots in the presence of mild to high Fe excess levels (
Role of HRZ in Fe Excess Tolerance (in Defense 1)
The HRZ, a Hemerythrin motif-containing Really Interesting New Gene- and Zinc-finger protein, is one of the key Fe homeostasis regulators.
Interestingly, HRZ expression is highly induced in response to Fe deficiency (
In addition to defense 1 in roots, HRZs might have additional roles in other tissues or organs under Fe excess condition. Further studies are desirable to clarify HRZ-mediated regulations in other defenses.
Defense 2 (Fe Retention in Roots and Suppression of Fe Translocation to Shoots)
Rice can retain Fe in the root tissues and decrease Fe translocation from roots to shoots (Tadano, 1975) to avoid excessive Fe accumulation in leaves and maintain homeostasis (
In graminaceous plants, various metals absorbed by roots accumulate in the discrimination center (DC) in the basal part of the shoot, and the DC regulates mineral distribution to other plant parts (Mori, 1998). Protecting shoots, particularly the newest leaf, from Fe toxicity is important for the survival of rice plants, and the DC preferentially transports Fe to old leaves rather than new leaves (
Defense 3 (Fe Compartmentalization in Shoots)
When defense 1 and defense 2 systems are insufficient, plants may allow Fe transport from the roots through DC for the subsequent avoidance of Fe toxicity by Fe compartmentalization, disposal, or storage inside shoots. In fact, some tolerant genotypes accumulate more Fe in aerial shoots, thus maintaining healthy shoot growth (Onaga et al., 2013). Indonesian rice genotypes, such as Siam Saba, Mahsuri, Margasari, and Pokkali, reportedly exhibit shoot-based tolerance, as evidenced by a high shoot Fe concentration, reduced leaf bronzing, and a high grain yield (Nugraha et al., 2016).
Notably, the Fe concentration in roots increased nine-fold in the presence of 20-fold Fe excess treatment and then reached to constant at higher Fe treatments (
Role of Ferritin and OsVIT2 in Fe Excess Tolerance (in Defense 2 and 3)
The Fe2+ ions, once in the cells, can be associated into proteins or stored in cellular compartments such as ferritins and vacuoles. Ferritin is a ubiquitous Fe storage protein that stores up to 4,000 Fe atoms in a complex (Theil, 2003). Ferritin genes are transcriptionally induced in response to excess Fe in both monocot and dicot plants (Stein et al., 2009b;
Vacuoles are important cellular organelle for Fe isolation to prevent cellular toxicity. The vacuolar Fe transporters, OsVIT1 and OsVIT2, are responsible for the sequestration of Fe into vacuoles via the tonoplast (Zhang et al., 2012). OsVIT1 is less responsive to Fe abundance (Zhang et al., 2012) and its expression is suppressed in all tissues mainly in roots (
In defense 2 and 3, plants allow internal Fe distribution or Fe sequestration in roots and shoots. To detoxify excess Fe in other compartments or tissues, plants transform excess Fe into non-toxic form by accumulation in ferritin and/or disposal of it in a vacuole via OsVIT2, or by exclusion from the symplast and efflux into the apoplast (Figure 2).
Role of OsNAS3 in Fe Excess Tolerance (in Defense 2 and 3)
Nicotianamine (NA) is a major chelator of metal cations in higher plants. It is a chelate compound involved in Fe transport within the plant body. Among the three NA synthase genes in rice, OsNAS1 and OsNAS2 are involved in Fe deficiency response (
Promoter-GUS (β-glucuronidase) analyses have revealed high-level OsNAS3 expression in the vascular bundle, epidermis, and exodermis of the root, stem, and old leaf under Fe excess (
Defense 4 (ROS Detoxification)
The fourth defense mechanism is Fe inclusion with tolerance to cellular Fe overload and damage in leaves, which is mediated by enzymatic detoxification in the symplast (
Under severe Fe excess, plants induce the expression of genes associated with oxidative stress, oxygen and electron transfer, and those encoding cytochrome P450 family proteins (Quinet et al., 2012;
Li et al. (2019) reported that S-nitrosoglutathione-reductase (GSNOR) promotes root tolerance to Fe toxicity by inhibiting Fe-dependent nitrosative and oxidative cytotoxicity in plants via the nitric oxide pathway. In Arabidopsis, knockout mutants display a root growth defect in the presence of high Fe (250 µM), demonstrating that GSNOR is important for root tolerance to Fe toxicity. Then, WRKY transcription factors are important superfamilies and key regulators of several processes associated with numerous abiotic and biotic stress tolerance in plants. Most WRKYs genes are critical in regulation of various contrasting stresses simultaneously, and also involved in ROS defense mechanism to various stresses including Fe excess stress (Figure 2).
Possible Working Model of Four Defenses
Given the roles of each Fe excess defense mechanism, the hypothesis is outlined in the model shown in Figure 2. Whenever the plant receives the Fe excess stress, defense 1 (Fe exclusion) works to inhibit root Fe absorption by the suppression of Fe uptake genes. This defense might protect well the plant in conditions of weak Fe toxicity. When Fe excess is more sever, defense 1 may no longer prevent the roots from excessive Fe uptake because some metal transporters also absorb Fe at the same time in the process of absorbing other essential metals such as Zn, copper (Cu) or manganese (Mn). In such a condition, defense 2 (Fe retention in roots and suppression of Fe translocation to shoots) works by accumulating Fe in a non-toxic form in safety compartments of roots that leads an increase in root Fe concentration, and also prevents the root-to-shoot Fe translocation by the suppression of the related genes. It is likely that defense 1 and 2 mechanisms constitutively drive since prior to the onset of visual damage in leaves and throughout the stress from low to severe Fe excess levels.
When defense 2 is insufficient to sequester excess Fe in root tissues, the excess Fe is translocated from root to shoot. In this case, defense 3 (Fe compartmentalization in shoots) begins to employ the functions of chelation, isolation and/or sequestration of excess Fe in a safe form in the shoot that leads an increase in shoot Fe concentration. Lastly, when free divalent Fe cannot be completely sequestered in safety form under severe Fe conditions, it becomes largely accumulated in the cytosol and causes Fenton reaction that generates ROS stress. In this condition, the corresponding genes in defense 4 (ROS detoxification) are induced to mitigate ROS stress in plants. Overall, these four defense mechanisms might work cooperatively and consecutively for Fe detoxification in rice depending on the degree of Fe excess progression.
Future Prospects For Crops Tolerant To Excess Fe
Gene Response and Regulatory Mechanism to the Fe Toxicity in Plants
There has been progress in our understanding of Fe excess defense and tolerance mechanisms in plants. Fe deficiency response and its regulation network in plants is well characterized and widely understood (
Viana et al. (2017) reported that the cis-regulatory elements involved in responses to abiotic stresses, such as light and salicylic acid pathway, participate in the molecular signaling involved in the response to Fe excess. However, promoter analyses of the functional cis-acting elements for the core Fe excess-responsive in rice still needs to be identified. Some bHLH transcription factors have important roles for Fe homeostasis in plants. OsIRO3 (OsbHLH063) acts as a negative regulator of the Fe deficiency response in rice (Zheng et al., 2010) and also involves in shoots-to-roots signal transmission which is important to prevent Fe toxicity in plants (Wang et al., 2020). Moreover, some WRKY transcription factors may also involve in Fe homeostasis in plants. Ricachenevsky et al. (2010) firstly reported the Fe-excess induced transcription factor, OsWRKY80 in rice, which is also regulated by the dark-induced senescence- and drought- stress. In that study, OsWRKY80 transcript level was increased up to threefold in roots and shoots after 9 days of Fe excess. Furthermore, microarray analyses have yielded 19 upregulated WRKYs in Fe-excess rice (
Developing Fe Excess Tolerant Rice via Molecular Breeding
Based on the tolerant rice lines selected by screening, the introduction of target genes into tolerant genotypes will increase further tolerance to Fe toxicity stress. As described above, the previous- and new-finding candidate genes encoding ferritin, VIT, NAS3, HRZ, GSNOR, and WRKYs may contribute to Fe excess tolerance in plants. In addition to these genes, there is a number of genes associated to the response to excess Fe; for example, overexpression of Arabidopsis Fe transporter, AtNramp1, leads to resistance to Fe toxicity (
Conclusion
Understanding of the molecular mechanisms of Fe excess tolerance in rice is essential for varietal development. There is a progress in discovery of candidate genes involved in the physiological and molecular response of rice to Fe overload, and their roles in Fe homeostasis, Fe detoxification, and Fe excess tolerance are becoming clear. These genes could be promising targets of genetic resources for the development of rice genotypes with increased Fe toxicity tolerance by breeding and to increase rice productivity in regions prone to Fe toxicity to meet the food demand for increasing population.
Funding
This publication was supported by a Grant-in-Aid for Young Scientists (B) (Grant No. 18K14367) from Japan Society for the Promotion of Sciences, JSPS KAKENHI (to MSA).
Statements
Author contributions
MSA and HM designed and wrote the manuscript. MSA led the writing of the manuscript. HM edited and improved the manuscript.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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Summary
Keywords
iron excess, rice, OsNAS3, HRZ, OsVIT2, ROS, iron homeostasis, tolerant mechanism
Citation
Aung MS and Masuda H (2020) How Does Rice Defend Against Excess Iron?: Physiological and Molecular Mechanisms. Front. Plant Sci. 11:1102. doi: 10.3389/fpls.2020.01102
Received
27 March 2020
Accepted
03 July 2020
Published
07 August 2020
Volume
11 - 2020
Edited by
Louis Grillet, Academia Sinica, Taiwan
Reviewed by
Karl Ravet, Colorado State University, United States; Ping Lan, Institute of Soil Science (CAS), China; Hannetz Roschzttardtz, Pontificia Universidad Católica de chile, Chile
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© 2020 Aung and Masuda.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: May Sann Aung, mayaung@akita-pu.ac.jp
This article was submitted to Plant Traffic and Transport, a section of the journal Frontiers in Plant Science
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